Paraburkholderia fungorum: OI25_1346
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Entry
OI25_1346 CDS
T03799
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn00300
Lysine biosynthesis
bfn00470
D-Amino acid metabolism
bfn01100
Metabolic pathways
bfn01110
Biosynthesis of secondary metabolites
bfn01120
Microbial metabolism in diverse environments
bfn01230
Biosynthesis of amino acids
Module
bfn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OI25_1346 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OI25_1346 (dapF)
Enzymes [BR:
bfn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
OI25_1346 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
CitF
Motif
Other DBs
NCBI-ProteinID:
AJZ57868
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Position
1:1529870..1530733
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AA seq
287 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVDGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDSGLTDKRSVHVQVQNGTIQLTMQENGEVLVDM
GAPVFEPERVPFAAKGLEGRREGADTLWPLDVNGETRWISVVSMGNPHAVQVVDDVEDFP
VLVEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDAPVLVHTHGGKLTITWDSTQEGAPLFMAGPAATVFEGEIELAD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaaaatgcacggcgcgggtaacgacttcgtcgtgctcgacggc
tacacccaaccggtcaacctgacgccggcgcaggtgcgcgcgctcgcggaccggcatttc
ggcgtcggcgccgaccagttgctgctggtcgaaaagcctaccgtggacggcgtcgatttc
agatatcgcatcttcaattgcgacggcggcgaggtcgagcactgcggcaacggcgcgcgc
tgtttcgtcaagttcgtgcgcgacagcggcttgaccgacaagcgcagtgtgcacgtgcaa
gtacagaacggcaccattcagctgaccatgcaggaaaacggcgaagtgctggtcgatatg
ggcgcgcccgtgttcgaaccggagcgcgtcccgttcgccgccaaaggcctcgaaggccgc
cgcgagggtgctgacacgctctggccgctcgacgtgaacggcgagacgcgctggatttcg
gtggtgtcgatgggcaatccgcacgcggtgcaagtggtcgacgacgtcgaagattttccg
gtgctcgtcgaaggcccggtgatcgagcggcatgcacgctttccgcagcgggtgaacgcg
ggcttcatgcagatcgtcggccgcagcgagatcaagctgcgcgtctacgagcgtggcgcc
ggcgagacgctggcgtgcggcacgggcgcgtgcgctgccgtcgctgcgggcattcgccgc
gggttgctggatgcgccggtgctggtgcacacgcacggcggcaagctgaccatcacgtgg
gatagcacgcaagaaggcgcgccgctcttcatggccggccctgcggcaaccgttttcgaa
ggcgagatcgagctggccgattga
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