Paraburkholderia fungorum: OI25_1487
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Entry
OI25_1487 CDS
T03799
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OI25_1487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_1487
Enzymes [BR:
bfn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OI25_1487
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OI25_1487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
BTH_I2711-like
Motif
Other DBs
NCBI-ProteinID:
AJZ60773
UniProt:
A0AAW3UYW3
LinkDB
All DBs
Position
1:1701375..1702292
Genome browser
AA seq
305 aa
AA seq
DB search
MSTLDDVATLELPFKPPFDWPRLLRFFGGRATPGVEAVEDGAYRRAIDWAGDSGTLTVRL
HPRKRCLVASIEGPASRHADALATPIARMFDLHADPRKIGRELAADPWLAPLIEAVPGLR
VPGAWSGFELVVRAIVGQQVSVKAATTIIGRLVQRAGERIEGHPHEHTAWRFPTPAALAA
VDLEKIGMPGKRVAALQGFAHAVATGDVPLDSKAADADSLRAALLALPGIGPWTVEYVAM
RAWRDADAWPAWDLVLMQSICARDPSLVRPTQQRARTDAWRPWRAYAAMHLWNEVADRAG
AARGG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgcttgacgacgttgcaacactcgaattgcccttcaaaccacccttcgactgg
ccgcgtctgctgcgctttttcggcggacgcgcgacgcccggcgtcgaagcggtcgaagac
ggcgcctatcgccgcgcgatcgattgggccggcgacagcggcacgctgaccgtacgcctg
catccgcgcaagcgctgcctcgtcgcgagcatcgaaggcccggcgagccgtcacgccgac
gcgctcgccacgccgatcgcgagaatgttcgacctgcacgccgatcccaggaaaatcggc
cgtgaactggccgccgacccgtggctcgcgccgttgatcgaagccgtgccaggtttgcgc
gtgccgggcgcgtggtcgggcttcgaactggtggtgcgcgcgatcgtcggccagcaggtg
agcgtgaaagcggccactacgatcatcggacgattggtgcagcgtgccggcgagcgtatc
gaaggtcatccgcatgagcacacagcgtggcgctttccgacacccgccgcgctcgccgca
gtggatctggaaaagatcggcatgccgggtaaacgcgtagcagccttgcagggcttcgcg
cacgccgtggcgacgggcgacgtgccgctcgacagcaaggccgccgacgccgacagcctg
cgcgcggcgttgctcgcactgcctggcatcggcccatggacggtggagtatgtggcgatg
cgcgcatggcgtgatgccgacgcgtggcccgcgtgggatctggtgctgatgcaatcgatc
tgcgcccgcgacccatcgctcgtgagacccacgcagcagcgcgcacgcacggacgcatgg
cggccgtggcgcgcgtatgcggcgatgcatctatggaacgaggtggcggaccgggcaggg
gccgcgcgcggcggctga
DBGET
integrated database retrieval system
