Paraburkholderia fungorum: OI25_1978
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Entry
OI25_1978 CDS
T03799
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn02024
Quorum sensing
bfn03060
Protein export
bfn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OI25_1978 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OI25_1978 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OI25_1978 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bfn02044
]
OI25_1978 (ffh)
Enzymes [BR:
bfn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OI25_1978 (ffh)
Secretion system [BR:
bfn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OI25_1978 (ffh)
Eukaryotic Sec-SRP protein
OI25_1978 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
AAA_16
AAA_31
YqeC
AAA_30
AAA_33
cobW
T2SSE
AAA_14
APS_kinase
Rad17
AAA_18
ResIII
Helicase_RecD
AAA_19
Mg_chelatase
AAA_17
TsaE
NACHT
AAA
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
AJZ58768
UniProt:
A0AAJ3SQJ7
LinkDB
All DBs
Position
1:complement(2220346..2221713)
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AA seq
455 aa
AA seq
DB search
MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVREFIAKVKEKAL
GEEVISSLSPGQALVGVVQRELTAVIGGDYEGKAVELNLAVTPPAVILMAGLQGAGKTTT
VGKLAKLLREKYKKKVLTVSCDVYRPAAIAQLKMVTEQVGADFFPSEPDQKPVDIARAAV
DWAKRHYHDVLLVDTAGRLGIDEAMMQEIAALHSELKPAETLFVVDAMLGQDAVNTAKAF
SDALPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDGLEIFYPDRMANRILG
MGDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFRAQLTQMKGMGGLSSLMDKLPA
QFQQAAAGADMGQAEKQMRRMEGIINSMTPLERAKPDLIKATRKRRIAAGAGVQVQEVNR
MLNQYDQMRTMMKKLKGGNLQKMMRGMKGMMPGMR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaatctgactcaacggatggcgcgcgtcgtcaagacgctgcgcggcgaagcc
cggctcaccgaggcgaacacccaggaaatgctgcgcgaagtgcgcctggcacttctcgag
gcggacgtggcgctgcccgtcgtgcgcgagttcatcgccaaggtgaaggaaaaggcgctc
ggcgaggaagtcatcagcagcctgtcgccaggtcaggcgctggtcggcgtggtgcagcgc
gagctgaccgcggtgatcggcggcgactatgaaggcaaggcggtcgaactgaacctcgcc
gtcacgccgccggccgtcattttgatggcaggtctgcagggcgccggtaaaacgaccacg
gtcggcaagctcgccaagctcctgcgcgaaaagtacaagaagaaagtcctgacggtctcg
tgcgacgtttaccgtccggctgctatcgcgcagttgaagatggtgacggaacaggtcggt
gcggatttcttcccgtcggaaccggatcagaagccggtagatatcgcgcgcgccgcggtg
gactgggccaagcgccactaccacgacgtgctgctggtcgacacggccggccgtctgggt
atcgacgaggcgatgatgcaggaaatcgccgcactgcacagcgagctgaaaccggcggaa
acgctgttcgtagtcgacgcgatgctcggccaggacgcggtcaacaccgcgaaggcattt
agcgacgccttgccgctcaccggcgtggtcctcaccaagcttgacggcgactcacgcggc
ggcgcggcactctccgtacgtcacgtgacgggcaagccgatcaagttcgtcggcgtcgcc
gaaaagctcgacggcctcgaaatcttctatccggatcggatggcgaaccggattctcggc
atgggcgacattctcgccctcgtcgaagaagcgcaacgcggcgtggacgttcaggccgcg
cagaagctcgccgacaaggtcaagaaaggcggcgacttcgacctcaacgatttccgcgca
cagctgacccagatgaagggcatgggcggcctgtcgtcactgatggacaaactgccggcc
cagttccagcaagccgccgccggtgccgacatgggccaggccgagaagcagatgcgccgc
atggaaggcatcatcaattcaatgacgccgctggagcgcgcgaagcccgacctgatcaag
gccacccgcaagcgccgcatcgccgcgggcgcgggcgtgcaggtgcaggaagtcaaccgc
atgctgaatcagtacgaccagatgcgcacgatgatgaaaaagctgaagggcggcaatctg
caaaagatgatgcgcggcatgaagggcatgatgcccggcatgcgctaa
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