Paraburkholderia fungorum: OI25_2017
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Entry
OI25_2017 CDS
T03799
Name
(GenBank) ribonuclease family protein
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
bfn
Paraburkholderia fungorum
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfn03019
]
OI25_2017
03016 Transfer RNA biogenesis [BR:
bfn03016
]
OI25_2017
Enzymes [BR:
bfn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
OI25_2017
Messenger RNA biogenesis [BR:
bfn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OI25_2017
Transfer RNA biogenesis [BR:
bfn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
OI25_2017
Prokaryotic type
OI25_2017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
AJZ60243
UniProt:
A0AAJ3XMU8
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All DBs
Position
1:2263424..2263840
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AA seq
138 aa
AA seq
DB search
MARKWQRIKGVLIGALTLCALSGSVPGAFARDYTAPADTQAQVQGTIAAAQLPREAVNTL
NLIAAGGPYPYEKDGIVFGNRERLLPPHRRGYYHEYTVPTPRSRNRGARRIVCGGPLQRI
DNCYYSDDHYTSFNRIVE
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagtggcagcgcattaaaggcgtgctgatcggtgctttgacgctctgcgct
ttatccggctccgtgcctggcgcgtttgcgcgcgactacacggcacccgccgatacacaa
gcacaggtgcagggcaccatcgccgcggcgcagttgccgcgcgaagcagtcaatacattg
aacttgattgccgcgggcgggccttacccgtatgagaaggacggcatcgtattcggcaat
cgcgaacggttgctaccgccgcatcggcgcggctattaccacgaatacaccgttcccacg
cctcgctcgagaaaccgcggggcgcgtcgcatcgtctgcggaggtccgctacagcggatc
gacaactgttactactcggacgaccattacaccagttttaatcgtattgttgaatga
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