Paraburkholderia fungorum: OI25_2348
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Entry
OI25_2348 CDS
T03799
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03030
DNA replication
bfn03430
Mismatch repair
bfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OI25_2348
03430 Mismatch repair
OI25_2348
03440 Homologous recombination
OI25_2348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfn03032
]
OI25_2348
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_2348
Enzymes [BR:
bfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OI25_2348
DNA replication proteins [BR:
bfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OI25_2348
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OI25_2348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
ATP-synt_DE_N
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AJZ58127
UniProt:
A0AAP5Q5Z0
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All DBs
Position
1:2630054..2631208
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AA seq
384 aa
AA seq
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MSEQFVPESALAMPIVFVDLETTGGSTSEHRITEVGVVEIGPAGVSRWSSLVDPQQPIPS
FIQQLTGITNAMVRGAPTFDAIAPVLFERLNGKLFVAHNASFDRGFLRGEFRRAGLAFDP
DVLCTVRLSRALFPAEKRHGLDALVERHGLVPSDRHRALADADLIWQFWQRLHGGLVPLE
VLQAQIERTTRRYRLAGDITEDLLDTAPAGCGVYAFYGEDDLPLYVGRSVRVRQRLRSHL
TGERRSSKDMRLAQQVRRVEWRATGGELGAMLAEAQLIATLRPGHNRVPRVTKSDPVDAP
WPFEGPVVFEEREEASHARAFHVVDRWHYLGHAPSLAQAATLHASSVTGPFELSTYRLLQ
SHLARGLRVMPLSVSNGIPVATLA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagtttgtgccagagtcggctctggctatgccgatcgtcttcgtcgacctt
gaaaccaccggtggctcgaccagcgaacatcgcatcaccgaagttggggtggttgaaata
gggccggccggcgtatcgcgttggagcagcctggtcgacccccagcaaccgattccctct
ttcattcagcaactgaccggcatcacgaacgcgatggtgcgaggtgcgccgacgttcgat
gccatcgccccggttctattcgaacgcctgaatggcaaacttttcgtagcgcacaacgcg
agtttcgaccgcggctttctgcgcggagagtttcgccgggccggcctggcgttcgatccg
gatgtgctgtgcacggtgcggctgtcgcgcgcattgtttccggcggaaaaacgccatgga
ctcgacgcgctggtggagcgtcatggcctcgttccgtccgatcgtcaccgcgcgctggcc
gacgccgatctgatctggcagttctggcagcgtctgcacggcggtctcgtgccattagag
gttttgcaagcgcagatcgaacgcaccacacggcgctaccggcttgcgggcgacatcacc
gaagacctgctcgataccgcaccggcggggtgcggcgtgtatgccttctatggagaagac
gacctcccgctgtatgtcgggcgaagcgtacgcgtgcgtcagcggctacgctcacatttg
acgggcgagcgacgttcgtcgaaggacatgcggctcgcgcagcaagtgcggcgggtcgaa
tggcgtgcgacaggcggtgaactgggcgccatgctcgcggaggcgcagttgatcgccaca
ctgcgtcccggccataaccgcgtgccgcgcgtcacgaagagcgatccggtggatgcgccc
tggccgttcgaaggtccggtcgtatttgaggagcgtgaagaagcgtcgcacgcacgcgct
tttcacgttgtcgaccggtggcattacctcgggcatgcgccctcgctcgcgcaggcggcg
acactgcatgcatcgagcgtgactggccccttcgagttgtcgacctatcggctgctgcaa
agtcatcttgcgcgcggcttgcgtgtgatgccgttgagcgtttcgaacggcataccggtg
gcgactctggcttaa
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