Paraburkholderia fungorum: OI25_2419
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Entry
OI25_2419 CDS
T03799
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bfn
Paraburkholderia fungorum
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfn03032
]
OI25_2419 (ihfB)
03036 Chromosome and associated proteins [BR:
bfn03036
]
OI25_2419 (ihfB)
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_2419 (ihfB)
DNA replication proteins [BR:
bfn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OI25_2419 (ihfB)
Chromosome and associated proteins [BR:
bfn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
OI25_2419 (ihfB)
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
OI25_2419 (ihfB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AJZ58935
UniProt:
A0A0D5VA34
LinkDB
All DBs
Position
1:2713653..2713979
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AA seq
108 aa
AA seq
DB search
MTKSELVAQLATRFPQLVLKDADFAVKTMLDAMSEALANGHRIEIRGFGSFGLNRRPSRV
GRNPKSGEKVLVPEKYVPHFKPGKELRERVDRRSGEPLKADEPDDDDL
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcggaattggtcgcccagctggctacgcgatttccgcaacttgtacttaag
gatgcggatttcgcggtgaagacgatgcttgatgcgatgtcggaggcgcttgccaacggt
catcggattgaaattcgcggcttcggcagcttcggccttaatcgtcgtccgtcccgcgtc
gggcgcaacccgaagtcgggcgagaaggtgctggtacctgagaagtatgtgccgcacttc
aagccgggcaaggaattgcgcgagcgggtagaccgacgttcgggcgagccgttgaaggcc
gatgaaccggatgacgacgacctgtaa
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