Paraburkholderia fungorum: OI25_2452
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Entry
OI25_2452 CDS
T03799
Name
(GenBank) exonuclease family protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OI25_2452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfn03019
]
OI25_2452
03009 Ribosome biogenesis [BR:
bfn03009
]
OI25_2452
Messenger RNA biogenesis [BR:
bfn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OI25_2452
Ribosome biogenesis [BR:
bfn03009
]
Eukaryotic type
Pre-60S particles
RNases
OI25_2452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AJZ60061
UniProt:
A0AAJ3SP23
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All DBs
Position
1:2744491..2745099
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AA seq
202 aa
AA seq
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MTDILASTEPPSLVRSDMNLVWLDMEMTGLEPDTDRIIEIAVVVTNSTLDRLVEGPVLAI
HQSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEADATEQIREFLGAYVPPGKSPMCGNS
ICQDRRFMARWMPDLERFFHYRNLDVSTLKELCRRWQPTIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPAAPDAAAAE
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcctcgcatccaccgaaccgccgtcgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgaaccggacaccgaccgcatcatcgaaatc
gcggtggtggtgacgaattcgacgctcgaccggttggtcgaagggccggtgctggcgatt
catcagagcgacgagacgctcgccaaaatggatcagtggaatcagaacacacacggccgc
tcgggcctgatcgaccgggtgaaggcgtcgacggtgagcgaagccgacgccaccgagcag
attcgcgagtttcttggcgcttatgtgccgccgggcaagtcgccgatgtgcggcaattcg
atttgccaggaccgccgtttcatggcgcgctggatgccggatctggagcgcttcttccat
taccgcaatctcgacgtcagcaccctgaaggaactgtgccgccgctggcagcccacgatc
tacaagggtttccagaagcgcgcgatgcatacggcgctggccgacatccacgaatcgatc
gacgagctgaagtactaccgcgagcacttcctgatcccggcggcaccggacgcagcggct
gcggagtaa
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