Paraburkholderia fungorum: OI25_2480
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Entry
OI25_2480 CDS
T03799
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03420
Nucleotide excision repair
bfn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OI25_2480
03430 Mismatch repair
OI25_2480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_2480
Enzymes [BR:
bfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OI25_2480
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OI25_2480
MMR (mismatch excision repair)
Other MMR factors
OI25_2480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
AJZ58089
UniProt:
A0AAU8T2N6
LinkDB
All DBs
Position
1:2775175..2777349
Genome browser
AA seq
724 aa
AA seq
DB search
MLSVAESPSPVDADSGTHPHPHSDTADWLTKLNDAQREAVEYGADSPNAPPGALLVIAGA
GSGKTNTLAHRVANLVVKGADPRRILLLTFSRRAALEMTRRVTRIAGAALGTRAALAQGL
TWSGTFHSVGARLLRECADLIGLAPAFTINDREDSADLMNLVRHELGLSAKERRFPAKGT
CFAIYSRVVNTGASLADVLDSAFPWCREWEADLRRLFASYTEAKQKQSVLDYDDLLLYWS
HMAAEPAIAADLSARFDHVLVDEYQDTNRLQASILLALKPDGRGLTVVGDDAQSIYSFRG
ATVRNILDFPAHFDPPATQITLERNYRSTEPILAASNAVIELASERYTKNLWTDKASAQR
PRLVTVADEADQARYIVEQVLEAREQGMKLKSQAVLFRAAHHSAALEIELTRRNIPFVKF
GGLKFLDSVHVKDVLAVLRWAENPRDRVAGFRVVQLLPGVGPTTAAKVLDEVAARAGAGN
PADFTRSAGGVLAAFAPPARAREDWHPFVKLMSSVYGRETPWPAEFEMVRRWYEPHLERN
HEDAAIRHADVLQMESIAGTYPSRERFLTELTLDPPDATSDESGVPLIDEDYLILSTIHS
AKGQEWRNVFVLNGVDGCIPSDLGTGSEEEIDEERRLLYVAMTRAKEDLHIVVPQRFYVH
NQTHLGDRHVWASRTRFIPAHLMPLFDAYAWPRVPVPSAPTAAGLAAAAQAKIEIGARLR
KMWD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgctctccgtcgctgaatctccgtcaccggtcgatgccgattccggtacccatcctcat
cctcattctgataccgccgactggctgaccaaactcaacgacgcgcaacgcgaagccgtc
gaatatggcgctgacagtcctaacgcgccgcccggcgcgctgctggtgatagcgggggcg
ggttccggcaagaccaatacgctggcgcatcgggtcgccaatctggtggtgaagggcgcc
gatccgcgccgtattctgctgctgaccttctcacgccgcgcggcgctcgaaatgacccgc
cgcgtcacgcgcatcgctggcgcggcgctcggtacgcgggctgcgttggcgcaagggctg
acgtggtccggaaccttccatagcgtcggcgcgcggctcttgcgcgaatgcgcagacctg
atcggcctcgcgcccgccttcacgatcaacgaccgtgaggattccgccgacctgatgaat
ctggtgcgccacgagctcggtttgtccgcgaaagagcggcgctttccggccaagggcacc
tgctttgcgatttactcgcgcgtggtgaacaccggcgcgtcgctcgccgacgtgctcgac
agcgcgttcccctggtgccgcgagtgggaggccgatctgcgcaggctgttcgcctcgtac
accgaagccaagcagaagcagagcgtgctcgactatgacgatctgctgctctactggtcg
catatggccgccgagccggccatcgcggccgatctgtcagcccgcttcgatcacgtgcta
gtcgacgagtatcaggacaccaatcgcctgcaggcgtcgatcctgctcgcgctaaaaccc
gatggccgtggcctgaccgtggtcggcgacgacgcccagtcgatctattcgtttcgcggc
gcgaccgtgcgcaatattctcgattttccggcgcacttcgatccacccgcgacgcagatt
acgcttgagcgcaattaccgctcgaccgagccgattctggcggcgtcgaatgcggtgatc
gagctggccagcgagcgctacacgaagaatctgtggaccgacaaggcctcggcgcagcgc
ccgcgtctggtgacggtcgccgacgaagcagatcaggcgcgctacatcgtcgagcaggtg
ctcgaagcgcgcgagcaaggcatgaagctcaagtcccaggcggtgctgtttcgcgcggct
catcacagcgcggcgctcgagatcgagttgacccgtcgcaacattccgttcgtgaagttc
ggcggcctgaagtttctcgactcggtgcatgtcaaggatgtgctcgccgtgctgcgctgg
gcggagaatccacgcgaccgcgtcgcgggttttcgggtcgtgcaattgctgccgggcgtc
ggtcccacgaccgccgcgaaggtgctggacgaggtcgcggcgcgggcaggcgccggcaat
ccggccgatttcacccggagcgcaggtggtgtgctggctgcctttgcgccgcccgcccgg
gcgcgggaagactggcatccgttcgtcaagctgatgtcgagcgtgtatgggcgtgagacg
ccgtggccggccgagttcgaaatggtgcggcgctggtacgagccgcatctcgaacgcaat
cacgaagacgcggcgatccgtcatgcggacgtgctgcagatggaaagcatcgcgggcacg
tacccgtcgcgcgagcgttttctgaccgagttgacgctcgatccgcccgacgccaccagc
gacgaatccggcgtgccgctgatcgacgaggactacctgatcctgtcgacgattcattcg
gcgaaggggcaggagtggcgcaacgtgttcgtcctgaatggcgtggatggctgcattccg
tccgatctcggcaccggcagcgaagaggaaatcgacgaggagcgccgcctgctatacgtg
gcgatgacgcgcgcgaaagaggacctgcatatcgtcgtgccgcagcgcttttacgtgcac
aaccagacccatctgggcgaccgtcacgtatgggcgtcgcgcacccggttcattccggcg
catctgatgcccttgttcgacgcctatgcgtggccgcgcgtgccggtgccgagcgcgccg
acggcggcggggctggccgcggcggcgcaggcgaagatcgaaattggcgcgaggctcagg
aagatgtgggactga
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integrated database retrieval system
