Paraburkholderia fungorum: OI25_2882
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Entry
OI25_2882 CDS
T03799
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OI25_2882 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bfn01007
]
OI25_2882 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfn03016
]
OI25_2882 (trpS)
Enzymes [BR:
bfn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
OI25_2882 (trpS)
Amino acid related enzymes [BR:
bfn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
OI25_2882 (trpS)
Transfer RNA biogenesis [BR:
bfn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OI25_2882 (trpS)
Prokaryotic type
OI25_2882 (trpS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AJZ59571
UniProt:
A0AAJ3XWI0
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All DBs
Position
1:3241014..3242216
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AA seq
400 aa
AA seq
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MFPDRIFSGMRPTGSLHLGHYHGVLKNWVRLQSEYPCFFCVVDWHALTTHYETPEVIEKN
VWDVLIDWLASGIDPAQATLFIQSKVPEHAELALLLGMSTPLGWLERVPTYKEQQEKLKD
KDLSTYGFLGYPVLMAADILLYRGSLVPVGEDQVPHVEMTREIARRFNYLYGREPGFEEK
ANEAAKKLGGKRAKLYHELRNAYQQEGDDEALEQARAMLQESQSLSMSDRERLFGYLEGS
RKIILVEPQAMLTEASRMPGLDGQKMSKSYGNTIGLREDAETIAKKVRTMPTDPARVRRT
DPGDPDKCPVWQLHQVYTDEATHEWVQKGCRTAGIGCLECKQPVIEGILREQQPMLERAQ
KYMDDPSLLRAIVADGCDKARKYASETMRDVREAMGLSYN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttcccagaccgtatcttctccggcatgcggcccaccgggtcgctgcacctcggccac
tatcacggcgtgctgaaaaactgggtgcggctgcagtccgaatacccgtgtttcttttgt
gtggtcgattggcacgcgctgacgacgcactacgaaacgcccgaagtgatcgaaaagaac
gtctgggacgtgctgatcgactggctcgcctccggcatcgatccggcgcaggccacgctc
ttcatccagagcaaggtgcccgagcatgcggagctggcattgctgctcggcatgagcacg
ccgctcggctggctcgaacgtgtgccgacttacaaggagcagcaggagaagctgaaggac
aaggatctgtccacctacggcttcctcggctatccggtgctgatggcggcggatattctg
ctgtatcgcggctcgctcgtgccggtcggcgaagatcaggtgccgcacgtcgaaatgacg
cgcgaaattgcccgccgcttcaactatctgtatggccgcgagccgggtttcgaagagaag
gccaatgaagccgcgaagaagctgggcggcaagcgcgccaagctttatcacgaactgcgc
aacgcctatcagcaggaaggcgacgacgaagcgctcgaacaggcgcgagccatgctgcag
gaatcgcagagcctgtcgatgagcgatcgcgaacgtctgttcggctatctcgaaggctcg
cgcaagatcattctggtcgagccgcaagccatgctgaccgaggcgtcgcgtatgccgggt
ctggacgggcagaagatgtcgaagtcgtacggcaacacgatcggcctgcgcgaagacgcg
gaaacgatcgccaagaaagtgcgcaccatgccgaccgatccggctcgcgtgcgccgcacc
gatccgggcgatccggacaagtgcccggtgtggcagttgcaccaggtctacacggatgaa
gccacgcacgagtgggtgcagaagggttgccggacggctgggattggttgcctcgagtgc
aagcagccggtgatcgaaggcattctgcgcgaacagcagccgatgctggagcgtgcgcag
aagtacatggacgatccgtcgctgttgcgcgcgatcgtcgccgacggctgcgacaaggct
cgcaagtacgcgtcggaaacgatgcgcgacgtgcgcgaggcaatgggcctctcgtacaac
tga
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