Paraburkholderia fungorum: OI25_3428
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Entry
OI25_3428 CDS
T03799
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OI25_3428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_3428
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
OI25_3428
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1045
Motif
Other DBs
NCBI-ProteinID:
AJZ60410
UniProt:
A0AAU8TID8
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All DBs
Position
1:3842123..3843142
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AA seq
339 aa
AA seq
DB search
MAHMIWKGAISFGLVHVPVQLYPATQSEKVGFNLLDKRTIDPIGYKQINKRTGKEVARDN
IVRGFEYEKDKYVVLSDDEIRAANPESTQTVDILAFVDAPDISFLYLDTPYFLTPDRKGE
KVYALLREAMKASGKIGVASVVLHNKQHLAALIPVGPMLALNTLRWAAEVRDFDEFKLPP
EGMKAAGVSARELDMAKKLINDMSDKWDPSQYHDTFHDDIMALVERKIRAGKTEEITEVE
APRESRRSADILDLSDLLKRSLGRGKGKPAAGARKHATDDDDEAADTTDTTDAGAEPATR
ARKKPRAARSAGTSRGGGGKRGGASAKAAPSAHKRRAAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcacacatgatatggaagggcgcgatcagcttcggccttgtccacgtaccggtgcag
ttgtatccggcgacgcagtcggagaaagtcggcttcaatctgctggacaagcgcacgatc
gatccgatcggctacaagcagatcaacaagcgcaccggcaaggaggtggcgcgcgataac
atcgtgcgcggtttcgagtacgaaaaggacaaatacgttgtcctctcggacgatgaaatt
cgcgcggccaatcccgagtcgacgcagacggtcgatatcctcgcattcgtcgacgccccg
gacatctcgttcctctatctcgacacgccttacttcctgacgcccgatcgcaagggcgaa
aaggtgtacgcgctgctgcgcgaggcgatgaaagcgtcgggcaagatcggcgtggcgagc
gtcgtactgcacaacaagcagcatctcgccgcactgattccggtcgggccgatgctggcg
ttgaataccctgcgctgggccgccgaggtccgcgatttcgacgagttcaaactgccgccc
gaagggatgaaggcggccggtgtcagcgcgcgcgaactcgacatggcgaagaagctgatc
aacgacatgagcgataagtgggatccgtcgcagtatcacgatacgtttcacgacgacatc
atggcgctggtcgagcgcaaaattcgtgcgggaaagaccgaggaaatcaccgaagtcgaa
gcgccgcgcgaatcgcgccgatccgccgatattctcgatctatccgacctgctcaagcgc
agcctgggccggggcaagggtaaaccggcggcgggtgcgcgcaagcacgcgacggacgat
gacgacgaggctgccgataccaccgataccaccgatgcgggtgccgaaccggccacgcga
gcacgtaagaagccgcgcgcggcgcgttcggcagggacgagccgaggcggtggcgggaag
cggggcggcgccagtgcgaaggcggcgccgtcggcacacaaacggcgcgcggctgcctga
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