Paraburkholderia fungorum: OI25_376
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Entry
OI25_376 CDS
T03799
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OI25_376 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_376 (uvrB)
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OI25_376 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OI25_376 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
Kinesin
AAA_22
AAA_16
SHCBP_N
DUF6827
Motif
Other DBs
NCBI-ProteinID:
AJZ59671
UniProt:
A0AAJ3SLA2
LinkDB
All DBs
Position
1:complement(437636..439729)
Genome browser
AA seq
697 aa
AA seq
DB search
MSEHHLTELDETLDESKFVTFEGSPFQLYQPYPPAGDQPTAIDTLVEGVQDGLSFQTLLG
VTGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVIIVGTVSAIYGIGNPSEYHKMIL
TLRTGDKLGQRDIIARLIAMQYNRNEADFQRGSFRVRGDTIDIFPAEHAEMAVRIELFDD
EVETLQLFDPLTGRVRQKISRFTVYPSSHYVTPRDTVIRAVETIKTELRERLEFFYSSGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADY
EQKTAGQVAEQLVRPTGLVDPEIEVRPARTQVDDVLAEINERVKVGDRVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADRVTDSMRRAIDETERRRAKQIAYNL
ENGITPRGVVKRIRDIIDGVYNVDDARAELKEQQTRAKFEDMSEKQLAKELKRLEKQMME
HAKNLEFEKAAQTRDQLALLRQRVFGANVGDHVPGVQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaccatctgactgaactcgacgagacgctcgacgaatccaaattcgtcacg
ttcgaaggctcgccgttccagctttaccagccgtatccgcccgccggcgaccagccgacg
gcgatcgacacgctcgtcgaaggcgtccaggacggcttgtcgttccagacgctgcttggc
gtgaccggctccggcaaaaccttcacgatggccaacaccatcgcgcggctcggccggccg
gctatcgtgttcgcgccgaacaagacgcttgccgcgcagctctattcggagttccgcgag
ttcttcccgcgcaacgcggtcgagtacttcgtctcgtactacgactactaccagccggaa
gcgtacgtgccccagcgcgacctgttcatcgagaaagattcgtcgatcaacgagcacatc
gagcagatgcggctgtcggccaccaagagcctgatggagcggcgcgacgtgattatcgtc
ggcacggtgtcggcgatttacggtatcggcaacccgtcggaatatcacaagatgattctg
acgctgcgtaccggcgacaagctgggccagcgcgacatcatcgcccggttgatcgccatg
caatacaaccgcaacgaggccgacttccagcgcggttcgttccgcgtgcgcggcgatacg
atcgatatcttcccggccgagcacgccgaaatggcggtgcgcatcgagttgttcgacgac
gaggtcgagacgctgcaactgttcgatccgctcaccggccgcgtgcggcagaagatcagc
cgttttaccgtgtacccgtcgtcgcactatgtgacgccgcgcgacaccgtgattcgcgcg
gtcgaaacgatcaagaccgaattgcgcgagcggctcgagtttttctacagcagcggcaag
cttgtcgaagcacagcggcttgagcaacgcacccgcttcgatctggaaatgctgcaggaa
ttgggcttctgcaagggcatcgagaactattcgcggcacttttcgggcgctgcgcccggc
gagccgccgccaacattggtcgactacttgccgcccgacgcgctgatgctgctcgacgag
tcgcacgtgctgatcggccagttgaacggcatgtacaacggcgaccgggcgcgtaaggaa
aatctggtcgactacggtttccgtttgccgtcggcgctcgacaatcgcccgctcaaattc
aatgagttcgagcgcaagatgcgtcaggtggtgttcgtgtcggccacgccggcggactac
gagcagaaaacggcagggcaggtggccgagcagctggtgcgtccgaccggtcttgtcgac
ccggaaatcgaggtgcgcccggcgcgcacccaggtcgacgatgtgctcgccgagatcaac
gagcgcgtcaaggtaggcgaccgcgtgctggtgaccgtgctgaccaagcgcatggccgag
cagctcaccgagtttctggccgaccatggcgtcaaggtgcgttacctgcacagcgacatc
gatacggtggagcgggtggaaatcatccgcgatctgcgtctgggcaccttcgacgtgctg
gtcgggatcaacctgctgcgtgaggggctcgatattccggaggtctcgctggtcgcgatt
ctcgacgccgacaaggagggcttcctgcgcgccgagcgctcgctgatccagaccatcggc
cgggcggcgcgtaacgtgaacggcaaggcgattctctacgcggaccgggtgaccgactcg
atgcgccgtgccatcgacgaaaccgagcggcggcgcgccaagcagatcgcctataacctg
gagaacggcattacgccgcgcggcgtggtcaagcggatccgcgacatcatcgacggtgtg
tacaacgtcgacgacgcacgtgccgagttgaaggaacagcagactcgggcgaaattcgag
gacatgtccgagaagcagctcgccaaggagctcaagcgcctcgagaagcagatgatggag
cacgccaagaacctcgaattcgaaaaggctgcacaaactcgcgatcaactggcgttgttg
cggcagcgcgtgttcggtgcgaacgtcggcgaccacgtgccgggcgtccagtaa
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