Paraburkholderia fungorum: OI25_60
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Entry
OI25_60 CDS
T03799
Name
(GenBank) binding--dependent transport system inner membrane component family protein
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OI25_60
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfn02000
]
OI25_60
Transporters [BR:
bfn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OI25_60
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
PARM
Motif
Other DBs
NCBI-ProteinID:
AJZ59544
LinkDB
All DBs
Position
1:75612..77447
Genome browser
AA seq
611 aa
AA seq
DB search
MNHSALSARPSQPAGPAQPIQPAPRRAAWRAWLKPGAKGAPLVVLLLVMLVYPVGQLLLL
SIHNDAGFTLIEYKRLFASSVYVDVLLITLKVSLWTTFFSVLTGYPIAYLISTASRARKN
RLLFWVLLSFWTSFLVRTFAWVVLLGRNGVINQLLLKLGIIDAPLSLLYHFSSVIVGMVH
ALMPLAVLTMLSVMENIDRRLPSAAATLGARPGTVFWKVYFPLSLPGVAAGALMVFVTAI
GFFITPTLLGGRHQTMITQLIIDQVMQALNWGFAGAISVLLLAVVLVVFLVYDRMVGLST
MAGESAGAKGSRAGGWSRKLGDLILSALGNATDALLAILPRSRAGRKRNAPGSGESLTLR
VIVFLLLVFLSAPAFLMIPLSFDSASGLAWPPHGFSLQWYRQIVDSPLWMQAITRSMLVG
LGTGLLSMLIGTPAAFLLVRGGMRGKAAMLAFVLSPIVVPRMIIAVGIFYFFAKIGLVGS
SLGLVLAHTTVAVPYVVITMMAVLRNYDTRLDLAAQSMGARPWATLRRVTFPILGAGLMS
SFLFAFATSFDELTIALFTSGGLSTTLPKQFWDEITMQISPVIAAVSTCLFIFIAALIWV
ADRLRRRSLAA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattccgctctgagcgcgcgcccttctcaaccggcggggccggcgcagcccatc
cagcccgcgccgcgccgggccgcctggcgcgcgtggctgaagcccggcgcgaaaggcgcg
ccgctcgtcgtattgctgcttgtgatgctggtctatccggtcggccagctcctgctgctc
agcattcacaacgacgccggcttcacgctgatcgaatacaagcggctcttcgcgtcgtcc
gtgtatgtggacgtactgctgatcacgctgaaagtgtcgttatggaccacgtttttctcc
gtgctgaccggttatccgatcgcgtatctgatttcgacggcgagccgggcgcgtaagaac
cggctgctgttctgggtcctgctgtcgttctggaccagctttctcgtgcgcacctttgca
tgggtcgtgctgctcgggcgcaacggcgtcatcaatcaactgctgctcaaactcggcatc
atcgacgcaccgctgagcctgctctatcacttttccagcgtgatcgtcggcatggtgcat
gcgctgatgccgctcgcggtgctgaccatgctgtcggtcatggagaacatcgaccggcgc
ctgccgagcgccgcggccacgctgggcgcgcgtcccggcaccgtgttctggaaggtgtat
ttcccgctgtcgctgccaggcgtcgcggccggcgcgctgatggtgttcgtcaccgcgatc
ggcttcttcatcacgccgacgctgctaggcggccgccatcaaacgatgatcacccaactg
atcatcgatcaggtcatgcaggcgctgaactggggatttgccggcgcgatttcagtgctg
ctgctcgcggtcgtgctggtcgtcttcctggtgtacgaccgcatggtgggcctctcgacc
atggcgggcgaaagcgcgggcgcgaaaggctcacgcgcgggcggctggagccgcaagctc
ggcgatctgatcctgagcgcgctcggcaatgcaacggacgccttgctcgctatcctgccc
cgctcgcgcgcaggccgcaaacgcaatgcgccgggcagcggcgaaagcctgacactgcgc
gtgatcgtgtttctgctgctggtgtttctcagcgcaccggccttcctgatgatcccgctg
tcgttcgattcggcttccgggctggcatggccgccgcacggattctcgctgcaatggtac
cggcagatcgtcgattcgccgctgtggatgcaggcaatcacacgctcgatgctggtgggg
ctcggcaccggtttgctgtcgatgctgatcggtacgcccgccgcattcctgctggtacgc
ggcggcatgcgcggcaaggcggccatgctggcgttcgtgctctcgccgatcgtcgtgccg
cgcatgatcatcgcggtcggcatcttctatttcttcgcgaagatcggcctcgtcggctcg
tcgctcggcctggtactggctcacacgacggtcgcggtgccctacgtcgtgatcacaatg
atggccgtgctgcgcaactacgatacccgtctcgatctcgccgcgcagagcatgggcgcg
cgtccgtgggccaccctgcgccgcgtcacctttccgattctgggcgcgggtttgatgtcc
tcgttcctgttcgcgttcgcgacctcgttcgatgaactgaccatcgcgctcttcacctcg
ggcggcctcagtacgaccttgcccaagcagttctgggacgaaatcacgatgcagatctcg
ccggtcatcgctgccgtatcgacctgcctcttcatctttatcgcggcgctcatctgggtc
gcggaccgtttgcgccggcgcagcctcgccgcctga
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