Branchiostoma floridae (Florida lancelet): 118403062
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Entry
118403062 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118403062
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04150
mTOR signaling pathway
bfo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118403062
04150 mTOR signaling pathway
118403062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118403062
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118403062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Neur_chan_LBD
Lectin_C
Kringle
Neur_chan_memb
DUF5050
Sushi
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
118403062
NCBI-ProteinID:
XP_035657392
UniProt:
A0A9J7HHF5
LinkDB
All DBs
Position
16:18617199..18652940
Genome browser
AA seq
1757 aa
AA seq
DB search
MAGLRGWYKVFILVVFFACLTSADQGDLGSRNNSEPFLLVADRDGSTILQINITSGSKVT
LPLVDVGNPHALDHDPLTDYVYWSDGGNNNVKRARRDGSGMETIIDTGSPVFGLALDHAG
GNIYWSALSTDTISVANKNGSSARTLLTSPAIGNPEGLVLDPRNGFLYWVDDNARIVRAA
MDGSTKTNIIVDLNAPSAIAIDFYEDRLYYRHQDYGIYSSDLLGNDIRQVLYEDGKWIEG
IAVDEDFVYWSSHWWDSSSSSLQGEIGKLSKSDLTKTVLVGGLEAPYGIYLSTAAPPGVT
TVTPSTTSPTTVVPSTEPTTVVPSIKPTTVLSSTEPTTVVPTTEPTTVVPSTEPTTVVPS
TEPTTVVPSTKPTTVVPSTEPTTVVPSTESTTVGPSTEPTTPATTPFTGDLGSRNNSEPF
LLVADNSGDTILQINITSGSKVTLPLVGVVAPWALNYDPLTDYVYWSEYSGNVKRARRDG
NGMETIIVTGSSNVPGLALDHAGGNIYWSVYSTSTISVAEKDGSSARTLLTSPDILQPGR
LVLDPRHGFLYWVESGARIVRAAMDGSNKTIIVNGLTDPFAITIDYYEDRLYYRDQRYRI
YSSDLLGNDIRQVLFEDGKWVNGIAVDEDFVYWSSSSHQGEIGKLSKSDLTKTVLVGGLE
APYGIYLSTAAPPGVTTVTPSTTSPTTVVPSTEPTTVVPSTEPTTVMPSTEPTTVVPSTE
PTTVVPSIKPTTVLSSTEPTTVVHSTKPTTVVPSTEPTTVVPSTKPTTVVPSTEPTTVVP
STEPTTVVSSTKPMTVVPSTESATVGPSTEPTTPATTHFTGCPPGYSAHGGSCFKAYNQG
KTYNQARKVCAANRGLLAMPKDEDADDFLRDLKDTVDPNSPFWFGMSDQSGEGRWVWEDG
TPYNTAANWPNGGWQPGEPNNEGEGEVCANHFRSGWNDAPCSTPHNFICQLNDAIDCPLG
YHQCGHGNACILAWQRCDGRTDCTDGSDEENCVCLPTPVDLNLGGRLAMLPNQLEQTTFE
EIQNSSVVELLDSSTSNAENQHPEFREFVSTVIFPRCLVSEENNTSCTLSPHGDNTASCM
TQLLPCRSWCEEVLHKADDRTKNRFPTCDLFPSPPHACWNPEPDKKYNQICYYGNGMNYR
GTWNETSSGADCVEWSAAQAGFYPTKYPWANLENNYCRNPTGLGQPFCMTEDGSQEDCDV
IQCKLFLCEDLGPPNYGHRTPLKRHYNVGDRVAYTCNVGYSLKPGAPTDVRCTDGGLWQY
DKPSCSVDFKGRLEKEILDVYNANQAPGAETEPDSKTETETDTMTETDSKTDAMTETETE
TATESKNDTLTETETETESKNDTMTETAKLSRSVIRFNGSVEQIVDLDEKKELLITSVAI
NFTWQDSRLKWEPEYYGNTRNLTLPGSSIWTPAFTLKKNADPLYRGLPKDVPIVISTDGT
VTWRVETLTSTICDANPFFFPADTMECHICFSVSPAIEKTIECGGGSSCDVWSPPQDEGE
WIRKDKIFAKGGKESCFAVYLQRVPLFHIATTVTPCAILVVLMIITFIMPIDKGDRISFG
VTIQLSMVVSLVFVTDVLPVKGALPYFASLIVVCMALMGLFLLFTLYIISIHDKEGSLSP
MAKTFFLYYMAKFLLLGDLTEKEAASGDGEAGLTGGKLAWPERANRVVPADDVVVTDVET
PVAVPETTRQPTRLEAALEEQTSCLRNLIRMAEEQVMKNEPEVSDYTLLTQVLDRLCLVL
YVISLAVAVPMTMYLGK
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggctggtttacgtggctggtataaggtgttcatccttgtggtgttcttcgcctgcttg
accagtgccgaccaaggagacctcggttcccgtaacaacagtgagccattcctgttggtg
gctgatcgtgatggatccaccattctccaaattaacatcacttccggatcaaaggtcaca
ctgcccctggtagatgttggaaacccccacgcgctggaccacgacccgctcaccgactac
gtgtactggtcagatggagggaacaacaacgtcaaacgggctcgtcgtgatggaagtggc
atggagaccatcatagataccggcagccctgtctttggcctggcgttggaccacgctggg
gggaatatctactggtctgccttaagcacagacaccatctctgtagcaaataagaacgga
tcgtccgccagaactcttctgacgtcaccagccattggaaaccctgagggtctggtcctg
gaccccaggaatggattcctgtactgggtggacgataatgccaggattgtccgtgctgcg
atggatggtagtaccaaaaccaatatcatcgtggatctaaatgctccctcagccattgca
atagacttctatgaggatcggctgtactaccgtcatcaggactacggcatctacagctca
gacctgctgggcaacgatatccgacaggtgctgtatgaagacgggaagtggattgaggga
atcgcggttgatgaggacttcgtctactggtcctctcactggtgggattcatcatcatca
tccctgcagggagaaatcggaaagctgtccaagtccgacctgaccaagactgtgctggtg
ggtggcctggaggccccatacggcatctacctgtccacggcagcgcctcctggcgtcacc
actgtgacaccttcgacaacatcacccacgactgtcgtgcccagcaccgaacccacgact
gtcgtgcccagcatcaaacccacgactgtcctgtccagcaccgaacccacgactgtcgtg
cccaccaccgaacccaccactgtcgtgcccagcaccgaacccacgactgtcgtgcccagc
accgaacccacgactgtcgtgcccagcaccaaacccacgactgtcgtgcccagcaccgaa
cccacgactgtcgtgcccagcaccgaatccacaactgtcgggcccagtaccgaacccacg
acaccggccaccacaccttttactggagatctcggctcccgtaacaacagtgagccattc
ctcttggtcgctgacaatagtggagacaccattctccaaatcaacatcacttccggatca
aaggtcacactgccacttgtaggtgttgtagcgccctgggccctgaactacgacccgctc
accgactacgtgtactggtcagaatatagcggcaacgtcaaacgggctcgccgtgatgga
aatggcatggagaccatcatagtcaccggcagcagcaatgtcccaggcctggcgttggac
cacgctggggggaatatctactggtctgtctacagcacaagcactatctctgtagcagag
aaggacggatcgtccgccaggacacttctgacgtcaccggacatcttgcagcctgggcgc
ctcgtcctggaccccaggcatggattcctgtactgggtggaaagtggagccaggattgtc
cgagctgcgatggatggtagtaacaaaaccataatcgtcaatggtctgactgatcccttc
gccattacaatagactactatgaggatcggctgtactaccgtgatcagcggtaccgcatc
tacagctcagacctgctgggcaacgatatccgacaggtgctgtttgaagacgggaagtgg
gttaatggaatcgcggttgatgaggacttcgtctactggtcgtcatcatcccatcaggga
gaaatcggaaagctgtccaagtccgacctgaccaagactgtgctggtgggtggcctggag
gccccatacggcatctacctgtccacggcagcgcctcctggcgtcaccactgtgacacct
tcgacaacatcacccacgactgtcgtgcccagcaccgaacccacgactgtcgtgcccagc
accgaacccacgactgtcatgcccagcaccgaacccacgactgtcgtgcccagcaccgaa
cccacgactgtcgtgcccagcatcaaacccacgactgtcctgtccagcaccgaacccacg
actgtcgtgcacagcaccaaacccacgactgtcgtgcccagcaccgaacccacgactgtc
gtgcccagcaccaaacccacgactgtcgtgcccagcaccgaacccacgactgtcgtgccc
agcaccgaacccacgactgttgtatccagcaccaaacccatgactgtcgtgcccagcact
gaatccgcaactgtcgggcccagtaccgaacccacgacaccggccaccacacattttact
ggctgtcctcctggctactctgcccatgggggttcgtgcttcaaggcgtacaaccaaggc
aaaacctacaaccaggccaggaaggtgtgtgcagcgaacagggggcttctggccatgccg
aaggacgaagacgcggacgacttcttgagggacctgaaggacaccgtggatcccaactcc
cctttctggtttggcatgagcgatcagagtggcgagggaaggtgggtgtgggaagatggg
actccgtacaacacagccgcgaactggccgaatggggggtggcagccgggggaacccaac
aatgaaggggaaggagaagtctgcgccaaccacttccgttccggctggaacgacgcgccc
tgctcgactccacacaacttcatctgtcagctgaatgatgcaatcgactgccccctgggg
taccaccagtgcggacacggaaatgcctgcatcctggcgtggcagcggtgcgacgggcgg
acggactgtacagacgggagtgacgaggaaaattgtgtgtgcctgccaactcctgtggat
ctgaacctcggcggcagacttgcgatgctgccgaatcagctggaacagacgacgtttgag
gagatacagaattcctctgtcgtggagctgctcgacagttcgaccagcaacgcagagaac
caacatcctgagttccgggaattcgtatctacggtcatcttcccgcgatgtcttgtctcc
gaagagaacaacacatcctgcactttgtctccacatggagacaacacggcctcgtgcatg
acacaactgctgccgtgccgctcgtggtgtgaggaagttctccacaaggctgatgaccgg
acgaagaaccggttccctacctgtgacctgtttccgtcaccaccacacgcctgttggaac
ccggagccagacaagaagtacaaccaaatttgctactatggcaacggtatgaactaccgc
ggtacatggaatgaaacttcatccggggcagattgtgtggagtggtccgctgcgcaggct
ggtttctacccgaccaagtacccctgggctaacctggagaacaactactgccgcaacccg
actggactcgggcagccattttgcatgacggaagatggcagccaggaggactgtgacgtc
attcagtgcaagctctttctctgcgaggacctgggtcctccaaactacggccacagaacc
cctctcaaaaggcactacaacgtgggggatagggtcgcgtacacctgcaacgtggggtac
tcactaaagcccggggctcccaccgacgtgaggtgcactgatggaggcctctggcagtat
gacaagcccagctgctcagtggatttcaagggtaggctggaaaaggagatactcgatgtg
tacaacgcaaaccaggcgcctggggctgagactgaacctgacagtaagactgagactgaa
actgacactatgactgaaactgactctaagactgacgctatgactgaaactgagactgag
actgcaactgaatctaaaaatgacactttgactgaaaccgagaccgagactgaatctaaa
aatgacactatgactgaaactgcaaagctctctcggtccgtcatccgcttcaatggctct
gtcgaacagatcgtcgacttggacgagaagaaggagctgctgattacctctgttgccatc
aacttcacctggcaggacagccggctgaagtgggagccagagtactacgggaacactagg
aatctcaccttgccgggcagcagcatctggaccccggcatttactctgaagaagaatgct
gaccctttgtaccgaggcctgccaaaggacgtaccgatcgtgatcagcactgatggtacg
gtaacatggagggtggagactctgaccagcaccatctgtgatgcaaacccgttcttcttc
cctgccgacaccatggaatgccacatctgtttctctgtgtcccctgcaattgaaaaaacc
atcgaatgcggaggggggagttcctgtgacgtctggtctcccccacaagacgaaggcgaa
tggattcggaaggacaagatcttcgctaaaggcggcaaggagtcgtgcttcgctgtttat
ctgcaaagggtcccgctgttccacatcgccactactgttaccccctgtgccatcctggtg
gtgctgatgatcatcaccttcatcatgcccatagacaagggagaccggatctccttcgga
gtgaccatccagctctccatggtcgtgtctctcgtgtttgtcacggacgtacttcctgtg
aaaggagcgctgccatatttcgcctctctgatcgtcgtgtgcatggcgctgatgggactt
ttcctcctcttcaccttgtacatcatcagcatccacgacaaggagggcagtctgtctccg
atggcgaagactttctttctctactacatggcaaagttcctgctgctcggagacctcaca
gagaaggaggctgcgagcggggatggagaggctggcctgaccggcgggaagctggcctgg
cctgagcgggccaaccgcgtggtccctgccgatgacgtggtggtgaccgacgtggagacc
cctgttgctgtccccgagacaacccgccagcccacccgcctggaggcagccctggaggaa
cagacctcctgcctgcgtaatctgatccgcatggctgaggagcaggtgatgaagaacgag
ccggaggtatccgattacaccctgctgacccaggtgctcgacagactgtgccttgtcctg
tacgtcatcagccttgccgtggccgtgcccatgaccatgtatctgggcaagtaa
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integrated database retrieval system
