Branchiostoma floridae (Florida lancelet): 118403211
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Entry
118403211 CDS
T01074
Name
(RefSeq) sonic hedgehog protein A-like
KO
K11988
sonic hedgehog
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfo01002
]
118403211
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bfo00536
]
118403211
Peptidases and inhibitors [BR:
bfo01002
]
Cysteine peptidases
Family C46: hedgehog family
118403211
Glycosaminoglycan binding proteins [BR:
bfo00536
]
Heparan sulfate / Heparin
Morphogens
118403211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
VldE
Motif
Other DBs
NCBI-GeneID:
118403211
NCBI-ProteinID:
XP_035657690
UniProt:
A0A9J7HG86
LinkDB
All DBs
Position
16:13249927..13275462
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AA seq
415 aa
AA seq
DB search
MAGVLARWMVTLVAISALGTHWGPSEACGPGGRFGRRRHPRKLTPFVYKQQMPAVSENTF
GASGLFNGRITRDSERFHTLKQNFNTDIIFKDEEKTGADRFMTQRCKDKLNALAISVMNQ
WEGVKLRVTEGWDEDGFHTEESLHYEGRAVDITTSDRDRTKYGMLARLAVEAGFDWVYYE
SKAHIHCSVKAESDTTATQGGCFPAESWVTRDDGNRIRMRDVRPGDKVLSMDSGGHPVFS
EVLTFMDRDSRGPWVYYTIHTDDRNITVTATPSHLVFVTESRDLSSPRIAKFMSDARPGE
FLLTPDSDGGGFRKVKIVSVTMREEKGAYAPLTVHGTVVVDNVAMSCYALIESQALAHWV
FAPFRLYYQLTSSLWDGPSHDQTLQEGVHWYPSFFYRYGISLVEPTLLHPTATDS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggtactagcgcggtggatggtcacactggtcgcgatatcggcgttgggaacg
cactggggaccgagcgaggcctgcgggcccgggggaaggttcggccggcgacggcaccct
cgcaagctcacccccttcgtgtacaagcaacagatgccggcggtctccgagaacaccttt
ggggcctctggcctgttcaacggacggattactcgcgactccgagcgtttccatactctg
aaacaaaatttcaacacagacataatcttcaaggatgaggaaaaaacgggggctgaccga
ttcatgacacagagatgtaaggacaagctaaacgcgctggccatttccgtgatgaatcag
tgggagggggtaaaactaagagtgacggagggctgggacgaggacggctttcacaccgag
gagtcgctgcactacgagggcagggcggtggacatcaccacaagcgacagggacagaacg
aaatacggcatgctggccaggctagcggtggaggcggggttcgactgggtgtactacgag
tctaaggcgcacatacactgttccgtaaaggcagaatccgacacaacggcgacccagggc
ggttgctttcctgcggaatcatgggtaacaagggacgatgggaatcgaattcgaatgcgt
gacgtcagaccgggcgacaaagtgttgagcatggacagcggaggtcatcccgtcttcagc
gaggttctgacgttcatggaccgcgattctagaggaccctgggtttactacaccatccat
acagacgacaggaatatcaccgtaacagccacgccctcccacttggtctttgtgacggag
tcacgtgatctgagttcaccgagaatcgccaagttcatgagcgacgcgcggccgggagag
ttcctgctcacgccggacagtgacgggggagggttccggaaagtgaagattgtttcagtg
acaatgagagaagagaagggcgcgtacgccccactaactgtacacggcacggtcgtcgtg
gacaatgtagcaatgtcctgctacgctctcatagagagccaggcgcttgcgcactgggtg
ttcgcgcccttcagactgtattaccagctgacgtcatcgctatgggacggtccatcgcat
gaccagacattacaggagggggtgcactggtacccctcctttttctacagatatggaata
tccctcgtagaaccgacgctcctacacccaacggcgacggattcatga
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