KEGG   Branchiostoma floridae (Florida lancelet): 118403472
Entry
118403472         CDS       T01074                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bfo04121]
    118403472
   03400 DNA repair and recombination proteins [BR:bfo03400]
    118403472
Ubiquitin system [BR:bfo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    118403472
DNA repair and recombination proteins [BR:bfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     118403472
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4
Other DBs
NCBI-GeneID: 118403472
NCBI-ProteinID: XP_035658091
UniProt: A0A9J7HEA9
LinkDB
Position
2:2332223..2364833
AA seq 1175 aa
MMSAVGTRGSRGGHRDRASSAKTQTQPGGKGAQVSPPERLPKQPQATSEQMRIAQMISDT
STEDPQWQEKIQQVRDVTGRGLDEATVALHDCDGDANRAINMLLEGEQDQGEWETAGKKK
SRGAPSTQRGLDSGPPGKENREEYRRGRNRDDRDRDGSSSRGRGPPRMARGGGRGGSRPR
ENGMAEDKEGSRDRGGRGRGDRRNRGDRDGDRRPGRFGHMNGPSRPGRGGFGRPRHDGPK
IGTFNPDEIKTEKTSDIWPNTESEWFVPGTWNPDQIETQEDWGADGDWTGDLSESKVFTP
SAPVANPEPIRSTPYQGERIDLAKLLNPNGGSTGSAETNGPQSYGPMGDNMNKLGAAPSQ
GLHQVDFLRQLQQGSSSLGMTSLGTSLGTSIGSSMPSMTFSQQQNQAPESQTRPNQLPPS
LQQVIQPPSSAAPGSSQPPVQPPLSSVQPALSSVPQPLSSAQVGPRQAKPPRRKMPPPSK
VGKSAIPESAVEMPGGSMYSVDSLDIQFGAMDFGSESTSTALDFGFGTDGTSSLLGTSSL
GVSTSGGSRLTATNTDTTYGSGFVGSGVNEQSLQSIMSTGSTTTTQTTQPAVETPSPRSA
YQSPHHTPQKDTSKGIQVTGPEPIPFPSSQMEGKTGPLVGSQRSQPSGMDALGSNKSEPS
LSSLPPPPGVATSASQLSSHQAVSSGLSGSSYAPHSTTSHSSAHHSYRDTSGSHTNSIQG
SAINSNKLGAGLKDSSAYDSQLSNQPSLDHMSHSMAGSHTTGGSTSVQSSTVQSTGSTGL
TSALGLTTTGSVTSTTAPSLKGSLGTTGHHVVSSVSQPHNAAPFPGKAPPNLPPGVGLLH
NQYLIGPGTAGMLPAYGFFNWPQNAARMAAQSQHQPIYSFEDMQVLQSRMPMAGYAYDMQ
FQPPTTLTGRDGTLPAYSGTDSKFTRGEASSPIPSSVAGQQQQQQSTHHGQTQAFLNPAA
GIPPGYNYSMPFYHGVAGIAPTGFNYGPAMFMAPATKQHGAGTATTQFQQPGGYGQPGTH
GYGTGYDDLTQTQDFTKSGYPSGTQTGSKGTVGSTGKGSVSSGTSAGSDLNMYGKTHQSF
DKQGFPAGTPPPFNLPLATGGQGGPLNPAAATGYPHTAFMTPMMPHHTQHHSQIPHHLLQ
QDGQGGTSQRSQPSGSQPKGPSSKSAYGSTYWGAN
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgatgagtgcggtggggacacgtggttcccgaggaggccatcgagaccgagcttcctcg
gccaagacacagacacagcccggcggcaagggagcgcaagtctcgccccccgagcggctt
cctaaacagccccaggctacatcagagcagatgcggattgcccagatgatctcagacaca
agcacagaggaccctcagtggcaggagaaaatccagcaggtccgtgatgtgacaggcaga
ggattggacgaggcaacggttgcgctccacgattgtgacggagatgcgaaccgcgccatc
aacatgctgctggagggggagcaggaccaaggagagtgggagacggcaggtaagaagaag
agccgcggagctccgtccacacagcgggggctggactctgggccgcccgggaaggagaac
agagaggagtaccggcgaggacggaaccgtgatgatcgggacagagacgggagctccagc
cgagggaggggaccgccacgcatggcacggggtggcggacggggaggatcacgtccgaga
gagaacgggatggcagaggacaaggagggcagcagagacagaggcgggcgggggcgcggt
gacaggcgtaaccgtggtgacagggatggagacaggcgaccgggcagatttggtcacatg
aatggcccgtctcggccaggcagaggagggttcgggaggcccagacatgacggaccaaag
ataggtacgttcaatcctgatgagataaagacagagaagacgtcagacatatggcctaac
actgagtcagagtggtttgttccaggtacgtggaacccggaccagatcgagacacaggag
gactggggtgctgacggagactggaccggagatctgtcggagagtaaggtgttcacacct
agtgcacctgtggccaatcctgaacccatcagaagcacgccgtaccagggagagagaatc
gacctggcaaagctgttgaacccgaacggtggctcgacgggctcggcagagacgaacggt
ccgcagtcgtacggtcctatgggggacaacatgaacaagcttggggcggcgccgtcacag
ggtctacatcaggtagatttccttcgtcagttgcagcaggggtcgagctcgctggggatg
acatcactgggtacgtcgctgggcacgtccatcgggagttccatgccgtcaatgacgttc
tcacagcagcagaaccaggctcccgagtcacagacgagacccaaccagctcccccccagc
cttcagcaggtgatccagcctccctcgtctgcagcgccgggcagctcgcagcctcccgtg
cagcccccgctgtcctcggtacagccggcgctgtcctccgtcccccagccgctgtcctcg
gcgcaggtggggcccaggcaagccaagccgcccaggcggaagatgccacccccatccaag
gtgggcaagtccgctatcccagagtcagcagtggagatgccgggaggttccatgtactct
gtggacagtctggacatccagtttggagccatggactttggttccgagtccacctccaca
gcgctggactttgggtttggaacggacggaacgagcagtttgcttggaacgtctagtctg
ggtgtgtccacatcgggcggaagtagactgacggccacaaatacagacacaacgtacggg
tcagggtttgtggggtcaggggtcaacgagcagtcgctgcagtctatcatgtccacgggc
tccaccacgacgacccagaccacgcagcccgcggtggagacgccgtccccgaggtctgct
taccagtctccgcaccacaccccgcagaaggacacatccaaaggcattcaggttacgggt
ccagaaccgattcccttcccctcatcacagatggagggcaagactggccccctggtgggg
tcacagaggtcacagcccagcggcatggacgctctgggctccaacaagagtgagccgtcc
ctgtcatccctgcccccaccaccaggggtcgccacgtcagcctcccagctgtcctcccac
caggcagtctcctccggcctctcaggctcatcgtacgcgccccactccacaacatcgcac
tcatcagctcatcacagctacagggacacgagtggtagtcacaccaactccatccagggc
tctgccatcaactccaacaagctgggtgctggactgaaggactcatcagcgtatgactca
cagctctccaatcagccttccctggatcacatgagccactcgatggcggggagtcacacc
acgggcgggagcacctcggtacagagcagcacggtccagtctacgggatccaccggcctc
acgtcagcgctgggactcactacgacgggatctgtcacctccacaacagcgccatcgctc
aaggggtcgctaggcaccacgggacatcatgttgtctcgagtgtttctcaacctcataat
gccgccccttttccaggtaaagcccctccgaacctccctcccggcgtgggcctcctgcac
aaccagtatctcatcgggcccggcaccgccggcatgcttccagcttacggtttttttaac
tggcctcaaaacgcagctcgaatggctgcccaaagccagcatcagcccatctacagtttt
gaagacatgcaggtgttgcagtccagaatgcccatggcggggtacgcgtatgatatgcag
ttccagcctcccacaacgttaactggaagggacgggacgctgccagcgtattcaggcaca
gattccaagttcacgcgaggcgaggcgtcgtccccgatcccatcctcggttgccgggcaa
caacagcagcaacagagcacgcaccacggtcagacgcaggcgttcctgaaccccgcggcc
gggatcccgcctgggtataactactccatgccgttctaccatggcgtggcgggtatcgcg
cccacgggattcaactacggacctgccatgtttatggcacctgcaacgaagcaacacgga
gcgggaacagcaacaacgcagttccagcaaccaggcggctacggacaacctggcacacat
ggttacggtacaggttacgacgatctgacgcagacgcaggatttcaccaagagtggttac
ccctccggcacacagacgggctccaagggaacggtcggatcaacgggcaaggggtcggtg
agttccggcacgtctgcgggttcagacctcaacatgtatggcaaaactcaccagtcgttt
gacaagcagggattccccgccggcaccccccctccgttcaacctgccgctggctacaggt
ggccaggggggccccctcaaccctgcggcggccaccgggtacccccacacggcattcatg
actcccatgatgccccaccacacgcagcaccactcccagattccgcaccatcttctgcag
caggacggacagggagggacgagccagcggtcccagcccagcggctcgcagcccaaaggc
cccagttccaagtcagcctacggctccacctactggggggccaactag

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