Branchiostoma floridae (Florida lancelet): 118403559
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Entry
118403559 CDS
T01074
Name
(RefSeq) MAM and LDL-receptor class A domain-containing protein 2-like
Organism
bfo
Branchiostoma floridae (Florida lancelet)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAM
Motif
Other DBs
NCBI-GeneID:
118403559
NCBI-ProteinID:
XP_035658187
UniProt:
A0A9J7HJ54
LinkDB
All DBs
Position
16:9340927..9372966
Genome browser
AA seq
3098 aa
AA seq
DB search
MTDCRTSGQYYYIEASSPRVQGERAHLVSQTFSGSTGTSQCLSFWYHMYGVGTGALRVRT
QINGVDTVRWALTGDQGNQWRNGQVSVGEAGDYQVIIEGEIGTTFRSDISLDDVGFTAGP
CSVLPANAAPVVPTTAGPTMLPTTAIAQTAPTDAPGGVNCNFERNVCAWTQVTTDDFDWT
RDNSGTPSANTGPAMDHTVGTSQGYYLYIEASNKGTGDIAQVSSPDITATRPKCFRFWYH
MWGNTMGSLNVYIQTGPALPSSAVWTRSGDQGNQWREAAIDIYNLQYNILFEAVRGTDVR
SDIALDDVTLTDGLCDAPVTSGNTCDFETADICRFSQDTADDFDWTRKTGSTGSGSTGPS
QDHTLGTGYYMYTEASGKQQGDVARLLSPQQTADPSGQCLQFYYHLYGTQIGTLNVYTQV
GTTAGRPLFTRSGDQDDQWHFAMVDIPETSNYQVVFEGIIGAGVRGDIAIDDVTISYGLC
PNGPAVPPTLCDFELDVICLYTQDQSDDFNWRYDSGGTSSGSTGPAVDHTYGTAAGHYMY
TEASSPRTPGDVARLLSHLYLNNTLGQCLDFWYHMYGNQIGTLNIYARTGSTYSNVLWSM
SADQGNQWNRAQVDLPVDAVYQVVFEGIVGTGVRGDIAIDDVNILPGACPRPGNCNFETA
GNRLCTWSNDQTNDEFDWIEGSGSTSSTGTGPSADHTLGDQTGFYMFLEASSPRQPGDRA
RLVSELFPPVSSFGRCLRFWYHMNGADIGTLRVSLKAQGQTEQPIWELSGDKGDQWLNAQ
VGISSNNDYTIILEGVRGQSHRGDIAVDDVTFVDSNCNLSPADAVPGAPTVPATTLAAVT
AAPGLFDCTFETNLCGWTQDTQDNFDWTRQLGATGSSNTGPSFDHTIGDQTGYYIFIETS
SPQVAGDRARVYSPTVVPTSTMCLHFWYHMYGEHIETLNVYIQTGPALPTIPTFQRTGTQ
GDQWTQAEVEVNTTSPYQVVMEGVRGTGFRGDIALDDITMTTGPCTTGTSYGINCDFEDS
NICGYVQKTDDQFDWTWQTGSTGTTNTGPPSDHTLGTPAGHYMYIEASSPRQPGDIAVLT
TPTVPGDNRQHCLQFYYHMFGVDIGTLRLWEVRGTEQPRIVWEMSGDQGNQWAAMQWAVT
PSIDTYFLFEGIRGNSFRGDISIDDVTYLNDRCIGASTGNCDFEAGPCTWSNTQVGDDFD
WTEGSGSTASTGTGPSIDHTTNSDQGKYMFIESSAPTQPGQNARWQSEQFPATAGSTRCI
KFWYHMYGSGIGTMNVLIQEQGLPDRILWQLASNQGDQWSDGQVEFTSLDSYRIVFEAVR
GLSHTGDIAIDDITFEESGCNLKPIAANPPTSPTLAPTSATTGTFDCDFDTDLCGWIQAV
DDEFDWIRQNGGTGSTNTGPTSDHTSGNGFYVFIETSAPQVTGDKARLVSPLVTPTGTKC
LTFWYHMYGDNVDSLNVYVQTGPVVGQPIWTNSGTQGNQWNLGQVDIPSSSQYNMVFEGV
RGNGFRGDIAVDDVTMTDGSCFGATVSPQAVCGFEDSRLCGFTNDGGDIFDWTWQTGGTG
TVNTGPTVDHTYGTSAGHFVFIETSSPRVPGDNAIFLSPTYPTSSPNYCVEFYYHMFGTN
IGTLNVYAKKNGNLGPALWTLSGDQGDIWVMAQVTVTADNPFQVAFEGVRGASYRGDIAL
DDISIVPGGCGTPGTCDFESGLCTWTNDLTGDDFDWVTGSKNSATTQTGPSTDHTTQNDT
GTYLYLEASSPRLPGDVARLVSEAFPVATGRCLSFWYHMFGSGMGTLRIVLHETQSRPVS
MWEVTGDQGDQWLQGQVPLTTSTSFQIYVEGVRGADYRSDAAIDDIEYTSTACTLMPAGA
TPATPTGTVPTTPAFTGPTPTPGPFDCDFESGLCGWLQLTDDDFNWSRNQGVTGSSNTGP
SSDHTTGNGYYIYIEASGQSTNRTARVMSPLVMPASRNCLQFWYHMYGDDVGTLNVYTRV
GSIVGDPLWTRSGTNGDRWVLAQVPVVGLTMYSVVLEGVRGDGFRGDIAVDDVAMLTGDC
PPVVVTPSPSAPPTSVTCNFESVSICGYQQSQADDFDWTRGSGGTGTTNTGPATDHTLGT
NNGYYMYIETSSPRQPGDKAVLRTPSFPQGNQAQYCVEFYYHMFGDHIGELKVFYVPTQQ
GSFASPMWELSGDQGDHWYLGQVTVQGDQDFYVEFEAVRGQSFRGDIAIDDVTVRNGACS
DPGSCDFENGPCTYTNDPNDDFDWTENSGSTGSTNTGPTTDHTTGTAQGTYYYIETSAPR
QPGDVARFVSQEFAPTAGTSYCLSFWYHMLGNGVGALHVVIKEKSGPEIYVWSLFGSQGN
QWLQAKVPVSSNDIWQISFDGSRGSNIRGDISIDDIVLQMQPVQGCTLQPSGATPAPPTM
SPTQSSLTIDCSFENDTCGWRQATDDDFDWSRQQGSTDTTQTGPGADHTTGNGYYVFIET
STPQVQGDAARLVSPYVSPGTNMCLKFWYHMYGTHVDTLNVYVQTGPALGTAVWTRTGTQ
GDQWFEGLVQVTASGQYNLVFEGTRGASYRGDIALDDVTFVPGDCPQVVVTPAPSSAPTT
QTCDFENQNLCGYTQDGTDDFDWTWATGGTGTTSTGPSADHTYGTPTGHYMYTETSSPRV
PGDVARLISPAFQSSVNSYCAEFWYHLYGQHIGTLNVYTKRQGNLGTAVWSMSGDQGDQW
YVASVTLDGTTDFQLVFEGVRGQSFRGDIAIDDVTVSSGACVAPGDCDFENGPCTWTNTQ
TGDEFDWIEGLGATSSPSTGPPSDHTLGTAQGTYMYIESSTPRVPGDRARWESQLFPGSQ
QSRCMSFWYHMRGPDIGTLTVYVNSGSSDQTVWQLSGDKGNQWLNGKVTVSSATSYQVVF
EAVRGSGYQGDIALDDLSFTDGTCAIMPVAATPGGGPTSVPASTAAPGPFNCDFEVDICG
WRQADDDNFDWTRHQGSTGTTDTGPSADHTTGSGYYIYIEASNVAVNRTARVISPPVTAT
TAKCVQFWYHMYGQHVDTLNVYIQTGPSLGSVVWMRTGTQGDNWNYGQIDITAGTSFNVV
FEAIRGSGYRGDISLDDISIVDSSCTQGMIKDRKMQES
NT seq
9297 nt
NT seq
+upstream
nt +downstream
nt
atgactgattgtcgtacctcaggacaatactactacatcgaggcgtcatccccaagagtt
cagggagagcgagcacatctcgtcagccagaccttttctggctctacgggtacgagccaa
tgcctgtccttctggtaccacatgtacggtgtgggaacgggcgcgctcagggtccgcaca
cagatcaacggagtggatactgtaagatgggctctgactggggaccaggggaaccagtgg
aggaatggccaagtcagtgttggggaagcaggagactatcaggttatcattgagggtgag
ataggcactactttccgtagtgacatatcgctggacgacgtcgggttcacagccggacca
tgttcagttcttcccgccaatgctgctcctgtagtaccaacaactgctgggccaaccatg
ttacctacaacagccatcgcacaaacagctccaactgatgcccctggtggcgtgaactgt
aactttgaacggaacgtgtgcgcctggacacaggtgacaacagacgactttgattggacc
cgtgacaacagcggcacaccttctgcaaacacaggacctgctatggaccacactgttggc
acaagccaggggtactacctgtacatagaagcctcaaacaaggggacaggtgacatagcc
caggtctccagtcccgacatcacagcgacgcgccccaagtgtttccgcttctggtaccac
atgtgggggaacaccatgggcagtctcaacgtgtacatccagactggccccgccctgccc
agcagtgctgtgtggacacgcagcggggaccaaggcaaccagtggagagaggctgcaata
gacatctacaatctacagtataatattctgtttgaggcagtgcgagggacagatgtgagg
agcgatatcgctttggatgacgtgactctcacggatgggctgtgtgatgctccagtgacc
tctggcaacacctgtgactttgagacagctgacatctgcaggttctcccaggacactgct
gatgactttgactggaccaggaaaactggtagcaccgggtctggcagtacaggaccctcc
caggatcacactctaggcacagggtactacatgtacacagaggcttctggcaagcagcag
ggagatgtggctcgcttgttgtcacctcagcagactgctgatcccagtgggcaatgtctg
cagttctactaccacctgtatggaacccagattgggaccctaaacgtctacacccaggtc
gggacaactgcaggcagacccttgtttaccaggtcaggtgaccaggacgaccaatggcac
tttgccatggtggacatccccgaaacaagcaactaccaggttgtgtttgagggcatcatt
ggtgctggggtgcggggcgacatcgccatcgatgatgtgacgatatcctatgggctctgc
cctaacggtccagctgtcccccctaccctctgtgactttgagctggacgtgatctgtctg
tacacccaagatcaaagtgacgacttcaactggagatatgacagtggtggcaccagctca
ggcagcactgggcctgcagtggaccacacctatggaactgcagcaggacattacatgtac
acggaggcatccagcccgaggactccaggtgatgtggctcgtctgctgtctcacctgtac
ctgaacaacaccctgggacagtgtctggacttctggtaccacatgtatggcaatcagata
ggcaccctgaatatctatgccaggacaggcagcacctacagcaacgtgctgtggtctatg
tcagctgaccagggcaaccagtggaaccgtgcacaggttgacctccctgttgatgcagtg
taccaggtggtgtttgagggaattgttgggacaggtgtgagaggggacatcgctattgat
gatgtcaacattctacctggagcctgtcctcgccctggaaactgtaattttgagactgct
gggaacagactgtgcacctggtccaacgaccagaccaacgatgagtttgactggatcgag
ggcagcggttcaacctccagtacaggaacaggaccttctgcagaccacactctgggggat
cagacaggtttctacatgttcctggaggcgtccagtcctcggcagccgggtgaccgtgcc
cggctggtcagcgagttgtttccaccggtgtccagctttggccgctgcctgaggttctgg
taccacatgaatggagctgacatcggaaccctcagggtctctctgaaggcacagggccag
acagagcagcccatctgggagctgtccggagacaagggtgaccagtggctgaacgcacaa
gttggcatcagcagcaacaacgactacacgatcatcttggaaggtgttcgaggccagtcc
caccgtggagacattgctgtggatgatgtcacctttgtcgactcaaactgcaacttgagt
cctgcagatgcagtacctggagcaccaacagtgccagcaacaacattagctgcagtaaca
gcagctccaggtctatttgactgtacctttgagacaaacctatgtggctggactcaggac
acccaggataactttgactggacacggcagctcggagcaacaggctcctccaacactggg
ccttcctttgaccacacaataggggaccaaactggctactacatcttcatcgagacttca
agcccacaagtcgccggggacagggcacgagtgtacagtcccacagtcgtccccacctct
acgatgtgcctacacttctggtaccacatgtacggcgagcacatcgagacgctgaacgtg
tacatacagacaggccccgctctgccgaccatccctaccttccagaggacgggcacacag
ggggaccagtggactcaggctgaagtagaagtgaacaccactagcccttaccaggttgtg
atggagggcgtccgtggtaccggctttcgaggagacattgctctagatgacatcaccatg
acaacaggcccgtgtaccacaggcaccagttatgggatcaactgtgattttgaagacagt
aacatttgtgggtacgtacagaagacagatgaccagtttgactggacatggcagactggg
tcaaccggcaccactaacactggacctccgagtgaccatactctgggcacaccagctggt
cattacatgtacattgaggcctcctcaccaaggcaacctggagacattgctgtcctgacc
acacccactgttcccggggacaaccgccaacactgtctacaattttactatcacatgttt
ggcgtggacattggcacacttaggctgtgggaggtacggggaactgagcaaccacgcata
gtttgggagatgtcaggtgaccagggcaaccaatgggcagccatgcagtgggccgtgacc
ccgagcattgacacctacttcttgttcgagggtatccgtggaaacagtttccgtggcgac
atctccattgatgatgtcacctaccttaacgacaggtgtatcggtgcttccacaggtaat
tgtgactttgaagctggtccatgcacatggtccaacacccaggtgggtgacgactttgac
tggacagaaggatctggcagcactgctagcaccgggactggaccatccattgaccacacc
acaaactcagaccaaggaaagtacatgtttattgagtcatctgcaccaacccaacctggg
cagaatgcccgctggcagagtgagcagttcccagccacagcaggctccaccaggtgtatc
aagttctggtaccacatgtacggaagtgggatcggaaccatgaatgttctaatccaggaa
cagggccttcctgacaggatcctctggcaactggccagcaaccaaggagaccagtggtca
gatggtcaagtggagttcaccagtctggactcctataggattgtgtttgaggctgttcga
gggctcagccacactggtgacatagccatagatgatatcaccttcgaggaaagtggatgt
aatctgaaacccatagctgccaacccaccgacatctccaactctggcacccacatcagcc
acaacgggcacctttgactgtgactttgacacggacctgtgtggctggattcaggccgtg
gatgatgagtttgactggatccgtcagaatggggggactggaagcaccaacaccggccca
acatcagaccacacgtcaggcaatggtttctatgtatttatcgagacctcagccccccaa
gtgaccggagacaaggctcgcctggtcagccccctggtcactcccacaggcaccaagtgt
ctgaccttctggtatcacatgtacggagacaacgtggacagtctgaacgtgtatgtacag
actggaccagtggtgggtcagcccatctggactaattcaggcacacaggggaaccagtgg
aacctgggacaggtggacataccaagcagcagtcagtacaatatggtgtttgaaggtgta
agaggaaatgggttcagaggagacattgccgtagatgatgtgacaatgactgatggatcc
tgctttggagctacagtaagccctcaggctgtgtgtggttttgaggactccagactgtgt
ggcttcaccaatgacggtggagacatctttgactggacctggcagactggagggaccggc
actgttaacactggacccacagtggaccacacttatggcactagtgctggtcattttgtt
ttcattgagacctcgagcccacgtgttcccggtgacaacgccatattcctgtctcccacc
tatcccacctcctcaccaaactactgtgtggagttctactaccacatgtttggtacaaac
atcggcacactcaatgtctatgccaagaagaatggtaacctgggaccagctctgtggact
ctatctggtgaccagggcgacatatgggttatggcacaggtgacagtgacagctgacaac
ccattccaagtagcttttgaaggtgtccgtggtgctagttaccgtggtgatattgccctg
gatgacatcagtatagtccctggaggatgtggtaccccaggcacctgtgactttgaaagt
ggactgtgcacctggaccaatgacttaaccggagacgactttgactgggttacaggaagt
aaaaactcagcaactacccagacaggaccctcgactgatcacaccacgcagaatgacaca
ggaacatacctgtacctggaggcctcctctccaaggctaccgggtgatgtggccagattg
gtcagcgaggctttcccagtggcaactggtcggtgtctgtccttctggtaccacatgttt
ggtagcggaatggggaccctacgcattgttctccacgagacacagagtagaccagtatca
atgtgggaggtaacaggagaccagggagaccaatggctacagggacaggtacctctgaca
acctcaacgtcattccagatctacgtcgaaggtgttcgaggtgccgactataggagtgac
gctgccattgatgacattgagtataccagcacagcttgtacattgatgccagcaggtgcc
acgcctgcaacccctactggaacagtaccgacaaccccagccttcacaggacctacacca
accccggggccgtttgactgtgactttgagtcgggtctgtgtgggtggctacagctgacc
gatgatgacttcaactggagcaggaaccagggtgttactggcagctccaacactgggcct
tcttctgaccacaccacaggaaatggctactacatctacattgaggccagcggacagtcc
accaataggacagctcgggtcatgagtccactagtgatgccagccagtcggaactgcctg
cagttctggtaccacatgtacggagacgatgtcggaaccctaaatgtctacaccagagtt
gggagcatagttggtgatcctttatggacgcgatcaggaaccaacggagaccgctgggtg
ttggcacaggttcccgtcgtcggcctgaccatgtacagcgtggtgctggagggagtgcga
ggagacggtttccgtggagacatcgctgtggatgacgtggccatgctgacaggagactgc
ccccctgttgtggtgacccccagccccagtgcccctcccacctctgtgacgtgtaacttt
gagagcgtcagcatctgtggataccaacagagccaggcggatgactttgactggacaaga
ggctcgggaggaactggtaccaccaacactggacctgcaactgaccacactctgggaacc
aacaatggttactacatgtacatcgaaacctcatcccctcgacagcctggagacaaggct
gtcctgcggaccccatccttccctcagggaaaccaggcgcagtactgtgtggagttctac
taccacatgtttggagaccacatcggggaactgaaggtcttctatgtcccaactcaacag
ggcagctttgcttcaccaatgtgggagctctctggagaccagggtgaccactggtacctg
gggcaggtcactgttcagggagaccaggacttctatgtggagttcgaggctgttcgagga
cagagtttccgtggtgatatcgccattgatgacgtgactgtcagaaacggagcatgcagt
gacccaggatcatgtgattttgagaatggaccttgtacctacaccaatgaccccaacgat
gactttgactggacagagaactcgggaagtacaggtagtaccaacactggacctaccaca
gaccacaccactggaactgcacaaggcacctactactacattgagacctcagcaccaaga
caacctggcgacgtggctcgctttgtcagccaggagtttgctccaacagcagggacaagc
tactgtctgtccttctggtaccacatgttggggaacggtgtgggagccctgcatgtggtc
atcaaggagaagtcagggcccgagatctacgtctggagcctgtttggttcccagggcaac
cagtggctgcaggctaaggtccccgtttccagcaatgatatctggcagatttcatttgat
ggatcgcgaggaagcaatattcgtggagacatttccattgatgacattgtcctgcaaatg
caacctgtgcagggttgtacattgcaaccgtcaggtgccacgcctgcccctccgaccatg
tcacctacacagtcatctttgaccatagactgtagctttgagaatgacacctgtggttgg
agacaggccacagacgatgactttgactggagtcgccaacaaggatcaaccgacaccaca
cagacagggcctggtgcagaccacacaactggcaatggctactatgtctttatagaaacc
tccactccccaagtccaaggggacgcagcgcggctcgtcagtccgtacgtgagccccggc
actaacatgtgccttaagttctggtaccacatgtacggcacacacgtggacacactcaac
gtgtacgtccagactgggccggctctgggaactgctgtgtggactcggactggcacacag
ggagaccagtggtttgaagggctggtgcaggttaccgctagtgggcagtacaatcttgtg
tttgaaggtaccaggggagcatcttacagaggtgacatcgctctagatgatgtcactttt
gttcctggtgactgtcctcaagttgtggtgacccctgccccaagctcagcccctaccacc
cagacatgtgactttgagaaccagaacctgtgtgggtacacccaggacggcacagatgac
tttgactggacatgggccactggaggaacaggcacaaccagtactgggccaagtgctgat
cacacctacggtactccaacaggtcattacatgtacacagagacctccagccctcgcgtg
ccaggtgacgtggctcggttgatctctcctgcgttccaaagctcagtgaactcgtactgt
gcagagttctggtaccacctgtacggacagcacattggaacactgaacgtctacaccaaa
cggcaggggaacctgggtacagcagtgtggagcatgtcaggagatcagggagatcagtgg
tatgtagcatctgtcaccctggatggcacaacagacttccagctcgtgtttgagggtgtg
cgtggtcagtcattccgaggtgatatcgccatcgacgatgtcacagtcagtagcggagca
tgtgttgcaccaggtgactgtgactttgaaaatggcccctgcacctggaccaacactcag
actggcgatgagtttgactggatcgaggggttaggagcgacgtccagccccagcactgga
cccccctcagaccacactctgggaactgcccaaggtacatacatgtacatcgagagctcc
actcctcgcgtgcctggggatcgggctcggtgggaaagccagctgttccctggctcccag
cagtcgcgctgcatgagtttctggtaccacatgcgagggccggacattgggacactgacc
gtgtacgtgaactctgggtcatcagaccagacagtgtggcagctctccggtgacaagggc
aaccagtggctcaatggcaaggttacagtcagcagtgcaacctcataccaggttgtgttt
gaagctgtgcgaggctccggttaccagggtgacatcgctctcgatgatctgagcttcaca
gatggcacatgtgcaataatgcctgtagcagccaccccaggaggtgggcctaccagtgta
ccagcctccacagcagccccaggaccgttcaactgtgactttgaggttgacatatgtggg
tggagacaggctgacgatgacaactttgactggaccagacaccaggggagcaccggcacc
actgacactggacctagtgctgaccacaccactggaagtggctattacatctacatcgag
gcatccaatgtggctgttaatcgtactgcccgagtgattagtccccctgttaccgccacc
acggccaaatgcgtccagttctggtaccacatgtacggtcagcacgtggacacactcaac
gtgtacatacagacgggtccgtctctgggcagcgtggtgtggatgcgcacaggcacacag
ggtgacaattggaactacgggcagattgacatcacagcaggaacttcattcaatgttgtt
tttgaagctatccgcggatctggataccgtggtgacatttcactggatgacatctctatt
gtggacagcagctgcacacaaggtatgatcaaggatagaaaaatgcaggagtcctag
DBGET
integrated database retrieval system
