Branchiostoma floridae (Florida lancelet): 118403634
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Entry
118403634 CDS
T01074
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118403634
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_13
LRR_9
LRR_NLRC4
DHU1_N
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
118403634
NCBI-ProteinID:
XP_035658302
UniProt:
A0A9J7KGU3
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Position
16
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AA seq
567 aa
AA seq
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MSTKSDTSPGAEGNDPPPTPTVKEKKTSVPAFDIGKKTSIGGMDPAKKQVTVAVDGNKPK
KTVSKKKSVPGMDVTKEFNRCREEGATRLDLSKKVISVLPPSVKELTQLVEFYLYGNRLQ
SLPPEIGHLVNLQTLALSENSLTTLPDQLVNLKKLKVLDLRHNKLKEIPDVVYRLTSLQT
LFLRFNRITVVGDDLQRLTKLTMLSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAE
IGNCVQMSSLDLQHNELLDLPETIGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEG
NNLSSLPEGLLSSLVNMSSLTLARNNFSSYPIGGPAQFATVYSINMEHNHINKIPFGIFS
RAKYLTKLNMKDNQLTSLPLDVGTWENMVELNLGTNQLQKLPEDIQHLTNLETLILSNNL
LKKLPRGIGNLRMLRVLDLEENRLESLPTEIAYLRDLNRLVVQSNQLTTMPRAIGHLTNL
TYLGVGENNLQQIPEEIGTLENLEQLYLNDNTNLHSLPFELALCGNLQIMSIENCPLSQL
PPEIVSGGPSLVIQFLKMQGPYRQMVA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaagagcgatacctcgccaggtgcggaaggaaacgaccccccgccgaccccg
acagtgaaagaaaagaagacttcggtccccgcgttcgatataggaaagaaaacgtccatc
ggaggcatggatccggcaaagaaacaagtgacggtcgctgtcgacgggaataagccaaag
aaaactgtgtcgaagaaaaagtcggtcccaggaatggatgtgaccaaagaattcaatcgc
tgtagagaagaaggagccaccagattagaccttagcaagaaagttatatcagtactaccg
ccttccgtgaaggaactaacccagctagtagaattctacctgtacgggaaccggttacaa
agtctaccgccggagatcggacatctagtcaacctacagaccctcgctctgagcgagaac
tccctcacaacccttccagaccagctagtaaacctgaagaagttgaaggtgctagacctc
agacataacaagttgaaagagatcccagatgtggtatacaggctgacttcgctgcagacc
cttttcctaaggttcaataggatcacagttgtcggggacgacctgcaaagattaacgaaa
ttgaccatgcttagcttgagagagaacaaaatccgagagcttcccggggggatcggccag
ctggtcaacctgatcaacctggacgtctcgcacaatcacctggagcacctgcctgcagaa
attgggaactgtgtacagatgtcatcactagacctccaacacaacgagcttctggatcta
ccagagaccataggcaacctcaagttactcagtagactaggactaaggtacaaccggttg
gcctcagtacccaagtccttgagcaactgtacagagatggaagagtttaatgcagaggga
aacaacctgtcatcgctaccggaggggttgttgtccagccttgtcaacatgtccagtctg
accctcgctaggaacaacttcagctcatatcccattggtggaccagcccagtttgccact
gtctattcgatcaacatggagcataaccacatcaacaagattccgtttggcatcttctct
cgtgccaagtacctgaccaagctgaacatgaaggacaaccagcttacatccctgcctcta
gatgtggggacgtgggagaacatggtggaactgaacctgggcaccaaccagctgcagaag
ctgcctgaagacattcaacatctcaccaacctggagacactcatcctctccaacaacctg
ctcaagaagctgccccgtggcatcggcaacctcaggatgctgcgtgttctggatctagag
gagaacaggctggagtccctgccgacagagatagcatacttgagggacttgaaccgactg
gtggtccagtccaaccagctgacgaccatgccccgagcgatcggtcacctgaccaacctg
acgtacctgggtgtgggggagaacaacctacagcagattccagaggagataggtacattg
gagaaccttgagcagctgtacctgaacgacaacaccaacctgcacagcctgcccttcgag
ctggccctgtgtggtaacctccagatcatgagcatcgagaactgtcccctcagtcagctg
cccccagagatagtcagcggtggaccatcccttgtcatccagtttctgaaaatgcagggt
ccatacagacagatggtggcataa
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