Branchiostoma floridae (Florida lancelet): 118403657
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Entry
118403657 CDS
T01074
Name
(RefSeq) programmed cell death 6-interacting protein-like isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03250
Viral life cycle - HIV-1
bfo03272
Virion - Hepatitis viruses
bfo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118403657
03272 Virion - Hepatitis viruses
118403657
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118403657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118403657
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118403657
Membrane trafficking [BR:
bfo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
118403657
Exosome [BR:
bfo04147
]
Exosomal proteins
Proteins found in most exosomes
118403657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
118403657
NCBI-ProteinID:
XP_035658323
UniProt:
A0A9J7HFI9
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Position
16
Genome browser
AA seq
883 aa
AA seq
DB search
MASSFLSVPLKKSSEVDLVKPPEKFIKNTYSGPGGTQDDFVPMLKELDKLRDSATCKTLD
RHDSSLELIQKYYDQLCAIEAKLPITENQEDEPPTPYQIRVNFTWYDAFDQGMLFLGKMK
KTMSSGDYERMCVLFNIGALMSQIAAAQNLGADDGLKNAAKYLQQAAGVFTHIKESMAGP
FQQVVTPDLSLEMLSTLSVVMLAQAQEAILLKSIQDKMKEVIIAKLSMQASDLYSDAMKQ
AQNPHFGDLLPKEWIPTLAGKQAMYHAQAEFYMSLLAKKNKSIGEEIARLKHALELAKTG
SSRAGSTMDMKDFIGKLQRAHDSADKDNNFIYHDRVPELSNLPAIGRAVVAKALPLSKPM
NPKFTDLFEKLVPLAVHQALTGYEARKADVVNREVGRLREATQLMNSVLASLNLPAAIED
LSGDNVPQSILEKGTAIKERGGIDKINQLIQDLPELLQRNKEVLDEANRVLDEEEKTDSE
LRANFKERWTRTASAQLYSPLRAEGGKYQSILDNAIHADTIVREKYNKHAENITLLCKPE
DLPGKIPSSSPAAALQGSKCVTDLRQLMEEVETIKAERDVIESEIKEAKTDISSKFLSAL
AQDGVVNEENLSVGELDRMFGPLQKQVTESVSRQEGLMNKIQTANTEFCQQKQASGSANQ
REEKLKDLAAAHDAFMELLGNLEEGTKFYNELLLLLVKFQTKCNDIVFARKTEKDEHLKD
LQENIAKQPSQSAPTPPAYQASGPGGAKPPPPARPPPPQVQPQQQQQQQQPPAQQAAAGS
QPPQLNMPQAGQPQYGYNNPQYYSPPPMPTSYNPYATMQYQPPPQQGAAAPYGQQPGAPP
YPQQQQAAPPYPQQQYAPQYPQPAYNPYAPPSQYNPYQQQQQR
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttttttgtccgtaccactgaagaagtcgtcagaagtagacctggtaaaa
cccccggaaaaattcatcaagaacacttactccgggccaggagggacccaagatgacttt
gtacccatgctgaaggaactggacaagttgcgagactctgcaacctgcaagacgctggac
agacatgacagttccttggagctcatccagaagtactatgatcagctctgtgcaattgaa
gccaagctcccaatcacagagaaccaggaagatgaaccccctaccccctaccagatccga
gtcaacttcacctggtacgatgccttcgaccagggcatgctgtttctgggaaagatgaag
aagaccatgtcatctggagactatgagaggatgtgtgtcctgttcaacatcggagcactg
atgagccaaatagctgctgcacagaacctgggcgccgacgacggcctgaaaaatgctgcc
aaatatctgcagcaagcggctggtgtgttcacacacatcaaggagtccatggcagggccc
ttccaacaggtggtgacccctgacctctccctggagatgctgagcaccctgtctgttgtc
atgttggcccaggcacaggaggccatcctgctcaagtctatacaagacaagatgaaggaa
gtcatcatcgcaaagttgtccatgcaggcgtctgacttgtactctgatgccatgaaacag
gcacagaacccacactttggagacttactcccaaaggagtggatcccaaccctagctggt
aaacaggccatgtaccatgcccaggctgagttctacatgtcacttctggccaagaagaac
aagagcattggggaggaaatagccaggctcaagcatgccctagagctggcaaagaccggt
agcagcagagcaggttcgaccatggacatgaaagacttcatcggtaaactccagcgtgcg
cacgactctgccgacaaggacaacaacttcatctaccatgaccgcgtaccggaactcagc
aacctgcctgccattggtcgagctgttgtggccaaggctttgcctctctccaaacccatg
aatcccaagtttactgacctgtttgagaagctggttcccctggcggtacaccaggctctg
actggttacgaggcccgtaaggcggatgtggtgaacagggaggtggggcggctgagggaa
gcaacgcagcttatgaacagtgtgctggcatccctgaatctgccagctgcgattgaggac
ctgtcaggtgacaacgtcccccagtctatcctggagaagggcactgccatcaaggagagg
ggaggcatcgataagatcaaccagctcatccaagacttacccgagctgctgcagaggaac
aaggaggttctagatgaggcaaatcgtgtcctagacgaggaggaaaaaacagacagcgaa
ttgcgggcgaacttcaaagagaggtggacgcgcacggcgtctgctcagctgtacagtccg
ctgagggcggaaggtgggaagtaccagtctatcctggataacgccatccatgcagatacc
attgtacgggagaagtacaacaagcatgctgagaacatcaccctactgtgtaagcctgag
gatctgccagggaagattccctcatccagcccagcagcagccttacaagggagcaagtgt
gtgacagacctgcgccagttgatggaggaagtagagactatcaaggcagagagagatgtc
atcgagtctgagatcaaggaggccaagactgacatctcgtccaagttcttgtcagcgctg
gcacaggacggtgtggtgaacgaggagaacctgtcggtgggagagctggacaggatgttt
ggtcccctccaaaaacaggtcacagaaagtgtgtccagacaggagggtctcatgaacaag
attcagaccgccaacacagagttctgccagcagaaacaggcgagtggatcggccaatcag
agggaagagaagctgaaagacctggccgccgcacatgacgccttcatggagctgctgggt
aatctggaagaagggaccaagttctacaatgagcttctgctgcttttagtcaagttccag
acaaagtgtaacgacattgtctttgctcgaaagacggagaaagatgagcacctgaaagac
ctacaggagaacattgccaagcagccgtcccagtctgcccccacccctccagcctaccag
gcctcgggacctggtggagccaagccaccgccacctgctcgcccccctccccctcaagtg
cagccacaacaacaacaacaacaacagcagccacctgcacagcaagcagctgcaggctcc
cagcccccacagctgaacatgccccaggcaggacagccccagtacggctacaacaacccc
cagtactacagccctccccccatgcctaccagctacaacccctatgcaaccatgcagtac
cagcctcctccacagcagggcgctgctgcaccgtatggacagcagcctggagccccaccg
tatccccagcaacagcaggctgccccgccctacccacagcaacagtacgccccccagtac
ccccaacctgcctataatccatacgcacccccctcccagtacaacccatatcaacaacag
cagcaacgttga
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