Branchiostoma floridae (Florida lancelet): 118403812
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Entry
118403812 CDS
T01074
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118403812
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bfo04812
]
118403812
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118403812
Cytoskeleton proteins [BR:
bfo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118403812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
HEAT_EF3_N
TOR1L1_N
HEAT_2
Cnd1
PDS5
Sec7-like_HUS
MMS19_N
TAN
Motif
Other DBs
NCBI-GeneID:
118403812
NCBI-ProteinID:
XP_035658510
UniProt:
A0A9J7HF45
LinkDB
All DBs
Position
16:complement(15645464..15755948)
Genome browser
AA seq
1364 aa
AA seq
DB search
MADGEFETLVDDVFDKDTTKRLAVAEVLVAYLQEHSSPLPADSSLMGRLVDGLAAWLNTS
NFKICLNGMEVISHLIVRLKEKFRHHINTVLPPLIDRLGDSKDQVREQAQELILRLMEPV
SSPQYVFERMMGAFGHRNFRVREEVLICLVATINTFGAGSLTLSKIVPHICKLLGDPNSA
VRDMAINSLVEIYRHVGEKVRVDLSKKGIPSSRLSVIFQKFDEVKQSGRMLAVSSSSSLR
SSSSGDGDETDSAKNRPFLYWSGHIYDSPIMMETAMIQAHMKIAPEVSRMSGAKRVSSAP
PRRPASAGMKPPLAPSSSAGAGGADEEMFIKFFEEVPKVNLFSARDLEDHMHKIKDTLGD
DKCDWEQRVDSIKKVRSLLVHGAMDYDNFFQQLKLLEPVFKLAVRDLRSQVVREACITLS
YLAQRLQSKFDHFAEVVMPNLFNLIPNSAKIMATAGAVTCRFIIQYTHAHRLIPIITSHH
NSKSVAIRRKTFELLDLLLRSWDTNTLEKHSQTLVETIKNGIGDADSEARVDARKCFWAF
KEHYPNLSDNLLKLLTPAQKKVLLGSLAHSASSDSLATQSTRLRASSSENVRSVPGSARR
THTAPCTTPSKLPKKDKADAKTPAGIPLSRSRSDIDMSAASRAKTRLGTGMLSTAHMRAG
ATASLGCSSGSETESQCSDLDYGYSRAGKSGSQSAKKKTPGRNWKAPRTSPGAAAEKAAE
ARGRQAGRQTRVSQSQRRSRSCSAAALVPQLKIVDIDISSTSDPAGSRSGSPGRHTSAYT
SYGRVEAGAGRRRTRSGIPRSTGTSRETSPKRYGMRSTSRERRLSESSGARRPVLGPAER
RPVASRAASSANPPVTALRVLGPGKDVEAAVADALANYSYDTVCHPQRRPMRRRYDVYSD
DDDSEICSVSSDKSNGSSYGRQLEPSNKTDWSSHEHLLLLVNEQQDIAEILNKCASSSWA
ERKDGLLGLQAMLRANQMLSRAELKRVTELFNRMFADPHGKVFSLFLETLVDLLMVHKAD
LTDWLYVLLTQLLKKLGADLLGSVQAKVQKALDTARDSFPYDVQFNILMRFIVDQTQTPN
LKVKVALLRYMEQLIVLMDPQDFINSSETRLAVSRIITWTTEPKSVEVRKAASAVLIGLF
ELNTPEFSMMLSVLPKTFQDGATKLLHNHLRNTSNANQGSPRRTTPVQSPRSGLTSPLAR
LGSLRNASPAGSVDYDAENMNSEEIYNSLRQTTAEIQNYNFHHDDHEPIKLDKKKDSDEV
SGDSGITSSMPDIRSDSPDAKIVHTDHAGDSHSKKQGLYNPTQYQDENNVNAYNRAALAE
ATFDEDFCGSVPLDQSEMIAELLRELSNHDERQDKSKFVAHRLR
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggagagttcgagactttggtggacgatgtttttgataaggacaccacgaag
cggctggcggtggccgaggttctggtggcatatctgcaggagcacagctcgcccctcccc
gccgactcgtcgctcatgggccggttggtggacggactggcagcatggctcaacacctcc
aacttcaagatctgcctgaacggcatggaggtcatcagccacctcattgtccgcctcaag
gagaagttcagacatcacatcaatacagtcttgccgcctctgatcgacagactaggagac
agcaaagaccaggttcgagagcaggcacaggagctaatactgagactcatggagccggtg
tcatccccacagtacgtgtttgagagaatgatgggggcgttcggacatcggaacttccgc
gtgcgagaagaggtgctcatctgtctcgtggccaccatcaacacgtttggtgcaggctct
ctcactctcagcaagattgtgccacacatatgtaagctgctgggagaccccaatagcgct
gttcgggacatggcaatcaactcgctggtagagatctacagacatgtgggggagaaggtc
agggtcgacctcagcaagaagggtataccatcatcaaggttgtctgtgatcttccagaag
tttgatgaagtaaaacagtcaggcaggatgctggcagtctcttcatcatcctcccttcgg
tccagcagttctggagacggagacgagacagactctgccaagaacagaccctttctctac
tggagcgggcacatatacgactcccccattatgatggagactgctatgattcaggctcat
atgaagatagctccggaggtatccagaatgtcgggagcgaagcgggtgtccagtgcgcca
cctaggcgaccggcatcagcaggcatgaagccgccgctcgccccgtcttcgtctgcgggt
gcgggaggagcggacgaagagatgttcatcaagttctttgaagaggtcccaaaagtcaac
cttttttcagccagagatctcgaggatcacatgcacaagatcaaggataccttgggcgac
gacaaatgtgactgggaacagagagtagactctataaaaaaagtgaggtcgttgctcgta
cacggagccatggactacgacaacttttttcagcagctgaaattgttggagccggtcttc
aagctggctgtgagagacctgcgctcacaagtagttagagaagcatgtattactttaagt
tatttagcacaaaggctacaaagtaagtttgaccactttgcggaagtggtgatgcccaac
ctgttcaacctcatccccaacagtgcaaaaatcatggccacggcaggagccgtcacctgt
aggtttattatacagtacacccacgcccatagattgatccccatcatcactagtcatcac
aactccaagtctgttgccatcagaaggaaaacatttgaactgctagacctgttgttacga
tcgtgggatacaaatactctagaaaaacactcacaaactctagtagaaacaatcaagaat
ggtataggagatgcagactctgaagcaagagtagatgctagaaaatgtttctgggccttc
aaggaacactaccccaacttgagcgacaacctgttgaagctgctcactccggcgcagaag
aaggttctcctgggatctctggcgcactccgcctcgtctgacagtttggcaacgcagtcc
acgcgcctgcgggcgtcgtcctcggaaaacgtcaggtctgtaccgggaagcgctcgcaga
acacatacagccccatgcacgactccttctaagctgcctaagaaagacaaagcagatgcc
aagacgcccgctggaattccgctgtcccgttcccgtagcgacatcgacatgtctgcggcc
tcccgtgccaagacgcggctggggacaggcatgttgtctaccgcacatatgagagcgggg
gcgacagcttccttaggctgctcctcaggctctgagaccgaatcgcaatgctcagatttg
gactatggctacagtagggcgggaaaatctgggagtcaaagtgcaaagaaaaagacacca
ggtcggaactggaaggcgccacggacgtcgcccggcgcagcggcggaaaaagcggcggaa
gcgagaggaagacaagccggcagacaaactagggtgtcgcagtcacaacgccgctctcgt
tcctgctccgccgcggctcttgtcccccagctgaagatagttgacattgacatctcctcg
acctctgaccctgcgggcagtcggtcgggctcccctggccgccacaccagcgcgtacaca
agctacggccgtgtggaggcgggggccgggcgccgacgcacacgcagcgggatccctcgc
agcaccggaacgagccgggagacaagcccgaagagatatggcatgcgatcgaccagtaga
gagcggcgcctcagtgaaagtagcggtgcgagaagaccggttctgggtcctgctgagaga
agacctgtggcctcacgggctgcaagctcagcgaatccccccgtgacagccctaagagtc
ctgggtccaggcaaagatgtggaggcagctgttgccgatgcactggcaaactacagttat
gacaccgtgtgtcacccacagagacgaccaatgaggcgacgctacgatgtctactcggac
gacgacgacagcgaaatttgttccgtttcttcggacaagtcaaacggttcaagttacggg
cgtcaacttgagccaagcaacaaaactgactggtcaagtcacgaacaccttctgcttcta
gtcaatgagcaacaagacatcgcagagatcctgaacaagtgtgccagcagctcctgggcg
gagaggaaggacgggctcctggggctccaggccatgctcagggccaaccagatgctcagc
cgtgctgagctgaagcgggtgacggaactgtttaaccgcatgtttgcggacccccacggg
aaggttttcagcctgttcctggagactctggtggacttactgatggtgcataaggcagac
ctgacagactggctctatgtcctgctcacccagctgctgaagaaacttggggccgacctg
ctggggtctgtacaggctaaagtacagaaggcactggatacagcacgggatagtttcccg
tacgacgtgcagtttaacatcctgatgcggttcatcgtggatcagacccagacgcccaac
ctgaaggtgaaggtggcgctgctcaggtacatggagcagctcatcgtgctcatggacccc
caggacttcatcaactcctccgagaccaggctcgctgtgtcgcgcatcatcacatggacc
accgagccaaagagtgtggaagttagaaaggcggcctcagctgtgctgattggtctgttt
gagctgaacaccccagagttcagcatgatgctgtcagttctgcccaagacctttcaggac
ggagccactaaactactgcacaaccatctacgcaacaccagcaatgctaaccagggcagc
cccagaagaacgactcccgtgcaatcccctcgcagcgggctgacctcccccctggccaga
cttggtagcctccggaacgcctctcccgcgggcagtgtggactacgatgccgagaacatg
aactccgaggaaatctacaactcactccgacaaacgacagcggaaatccagaactacaac
tttcaccatgacgatcacgagccgatcaaactagacaagaaaaaagacagcgatgaggtt
tcaggagacagtggaatcactagctctatgccggacattcggtccgacagcccggacgcc
aagatcgtgcacacagaccacgccggggattcccactctaaaaagcagggactctacaac
ccaactcagtaccaagatgagaacaatgtgaatgcctacaatagagcagctctagcagag
gccacatttgatgaagatttttgtggatctgttccccttgaccaatcagagatgatagca
gaactcctgagggaattatccaatcacgatgaaagacaagacaaatcgaagtttgtggcg
catcgactgaggtga
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