Branchiostoma floridae (Florida lancelet): 118403879
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Entry
118403879 CDS
T01074
Name
(RefSeq) lissencephaly-1 homolog
KO
K10267
F-box and WD-40 domain protein 12/13/14/15/16/17/19
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118403879
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118403879
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
F-box-like
EIF3I
Beta-prop_EML
F-box
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
F-box_4
NBCH_WD40
F-box_5
Beta-prop_RIG_1st
PEP5_VPS11_N
TFIIIC_delta
DUF1543
Motif
Other DBs
NCBI-GeneID:
118403879
NCBI-ProteinID:
XP_035658626
UniProt:
A0A9J7K6D3
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Position
2:complement(25871632..25878465)
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AA seq
477 aa
AA seq
DB search
MAEVDAESSSSSALSVPFDCLLEIFGYLDGHDLAKVSRVCKNWHDAAQTPLLWKHLCLQR
WLFCNLSNMTPGEQAWQEYYIHRHAVDTSMGRGAPKKDYRAKTLRGHKGQIHDAVYLSKK
EVCFDTANFQPILASCSEDKTVRVWNITEGSELWVGTEHRSAVTCLVLWEEESILCSGDQ
DGDVHMWDCPTGQNRGSLRGHDGGVTKMVVYKSGGYTVLLAGTGQGDIKMWDLRNTAACL
KTFPAVPGMAVNILSLHKDRTLAVASSDGGGMKLYDLERLLSPEGLMGDAEDCQVGELEH
PSLQHTCCITWLPWKPNMAAIGYRNGDIGIWDLKPASSGREKGLPVLLHITSAHFGAVRG
LSAVHNMLVSASTQDVHLKTWSLQNDGSLTEEKTYTDHQGPVTGIHVDHYKAVSCSDDFS
IRVYQWGREGGSRVLDSKYTLLGGSLQRASGFQSVLSDYTSCVGISGNVLKAYTFTT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagttgacgctgaaagcagtagtagtagtgctctgtctgtgccgtttgattgt
ctactagagatctttgggtatctcgatgggcacgacctcgcaaaggtgtccagagtgtgt
aagaactggcatgatgctgcccaaactccattattgtggaaacacctgtgcctacagaga
tggctgttctgtaacctgtccaacatgaccccaggagagcaggcctggcaggagtactac
atacacaggcatgctgtggacaccagcatggggaggggggcacccaaaaaggactaccgg
gcaaaaactctcaggggacacaagggtcagatacatgatgccgtgtacctgagtaagaag
gaggtgtgctttgacaccgccaactttcagcccatcctggccagctgttcagaggacaaa
actgtaagagtctggaacatcacagagggcagtgagctatgggtaggcacagaacatagg
agtgctgtgacttgcctggtgctgtgggaagaagagtccattctgtgcagtggggaccag
gatggagatgtacacatgtgggactgtcctactggacagaacaggggcagtctcagagga
catgatggaggggtgaccaaaatggtggtctacaagtcaggagggtatacagtacttctg
gccggtacaggacagggagacattaagatgtgggacctaagaaacaccgcagcttgtctg
aagacattccctgcagtccctggcatggctgtcaacatcctcagtcttcacaaggacaga
acactggctgtggcatcgagcgatggaggagggatgaagctgtatgatctggaaaggttg
ctgtcccccgagggtctaatgggtgatgcagaggactgccaggtgggagaactggaacat
cccagcctgcaacacacctgctgtatcacctggttgccatggaaacccaacatggctgca
atcggctatagaaatggagacattggcatctgggatctcaaacctgcatcttcaggtaga
gaaaaaggtttaccagtactacttcacatcacatctgcacattttggagcagtcagagga
ctgagtgccgtccacaacatgctggtatctgcaagcacgcaggacgtgcacttaaagaca
tggtccttacaaaatgatggcagcttgactgaagagaagacgtacactgatcaccaagga
ccagtcacaggcattcatgtggaccactacaaggccgtgtcctgctcagatgacttttcc
atcagggtttaccagtgggggcgggaggggggcagcagagttctggacagtaaatacact
ctactgggagggtctcttcaaagggcaagtggtttccagagtgtactgagtgactacacc
agctgtgtggggatttcaggcaatgtgctgaaggcctacactttcacaacatag
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