Branchiostoma floridae (Florida lancelet): 118404005
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Entry
118404005 CDS
T01074
Name
(RefSeq) sodium channel protein 1 brain-like
KO
K21862
voltage-gated cation channel
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfo02000
]
118404005
Transporters [BR:
bfo02000
]
Other transporters
Pores ion channels [TC:
1
]
118404005
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
IQ_SCN5A_C
GPHH
ECSCR
SMP_MUG190-like
Motif
Other DBs
NCBI-GeneID:
118404005
NCBI-ProteinID:
XP_035658800
UniProt:
A0A9J7HG25
LinkDB
All DBs
Position
17:complement(10624706..10804383)
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AA seq
1679 aa
AA seq
DB search
MHRSNMKRKSSAKGTNITFKCPDKVLCVVVNRTSSTCIFRFPGDKVLFCLGPLHPIRRIA
ICVATNKYFEMFVMCTILINSLILSLSRPIPITDYVFMAIYTAEMAIRVVASGFIRRKHS
YLRDMWNVIDFLVIFLAYATLFGDFSNLSGLRTFRILRALKTVSIIRGDTSSFEESYDPE
PSGSQDFSLGINGLKQAVQALLKSMKMLLNVLTLILFCLIVIALFALQLYMGVLTNKCVR
NLPTNVTNVTHDFYAAYTWNKTNWQPGREDWKFQVCGNVSGAGTCAENYTCLGDIDGNPD
YTSFDNFGWGLLMSFELLTLDYFENVYDLVMRAYGPWNMIFFVAVTFFGSFYLVNLMLAV
IAMTYQEQKRQDMERKRKMLETGEESWMLKFSRKPYEMWYILEGVKLIALTKERLSLLNM
QIRQRFQKRKLAHLRKIAKSAGRQTVEAEETPPVEIPLVEQNSTENVASAEGGPRNCCVG
PSHYTCITVEPPGSPLRHQNTNGYDMEYIKSTCSCHRDRSLQNQENNVPPASAILAMSAA
STTSPNGEAEQGDSTDGKCCRALKIKKEKCVSFLFDYCCEWVCCTSSCWSKFQHYVDRVV
SDPLFDFLIMICILINTGFLAVDHHGMSQSLAKTLDDGNKIFTAIFTAEVLLKMMAWTPK
KYFQDYWNVFDCCIVFISLIEWGLEGVEGLSVLRSFRLARVTRVLKLAKSWPTMQLLLTI
ITNSIQDVGGLTFLLVVIIYIFSVLGMQMFGQDYKDNYLRLPGKEVPRWNFVDFHHSFMM
VFRVLCGDWVKPLYDCMAVSGYGCVIMYVAALAVGNFVVLNLFVAMLLSSFASEELSSFE
NNTNSIQDGMKRLKEIFGLNGLFNSCRNPKKQKDDSVITVDRKNLLKYLHERTHTKLSLV
SDKSDHSVQDCFPSVIMRLRCWKKFSMSKFGRYWAKFRLKTLKIVDNNIFEGFILVIILA
SSILLAFDDIYLDTRPTLQKVLAILDIIFALIFLIEMLLKWIAYGFVKYFTNGWCVLDCV
VVAVGLPVSLFSIALESTTKSANLSAVRSLRVFRALRPLRAISRWQGMKVVVSALLHAVP
AIFNVLLVCVVFWLIFGIMGVQLFSGQFFKCLDHEGERIPATLINDKTACVTGNFTWINS
KVNFDNVGAALLALFQVATFQGWIEIMHDAVDVRGVDMQPSREANPYMYIYFVVFAIFGS
FFTLNLFIGAIIDNFNSLKRKYEGEGYLDIFLTSNQKKYYNTLRKLSDKKPQKIVSRPKI
RWRAAIFDFALSKEMEIAVMGAIGLNMVAMAIEHYHQTEVITHVLWVINLVFTGLFTLEA
IVKLIGMGNQYFRLPWNVFDFCIVVLSILGFLLEDVLKSRFLTPTLLRVVRIFRIGRVLR
LIRAAKGISRLLFALLISLPALFNICILLLIVMFIFSIMGMVSFTHVHHEGMLDEIVNFE
TFGRSMMLLFRLTTSAGWNDILEPLMKYCDTSEPDHDGLCSGTTIPALYLVSYIMVSSLI
IRNMYIAVGLEGFNQAQEQKHVGITEDDFESFYMVWQRYDPDATQFIDYTLLTDLVDELD
DPLRLRKPNNIKLQTLDIPLVSGDRVHCIDVLKELTTFTYKRLWGDVENTDEFGEIMDQM
EDTFKKSFPTRVNEVVVTTTARREREFRAAVLIQRAFRNHQTAKWAELLKSFTIHETTV
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggtccaacatgaaaagaaagtcttcggcgaaggggacgaacataaccttcaag
tgtccggataaggtgctgtgtgtggtcgtcaacaggacgtcctccacctgcattttccgt
ttcccgggagacaaggttctgttctgcctgggaccgctccatcccatccggaggatagcc
atctgtgtggcaaccaacaaatattttgagatgttcgtgatgtgtaccatcctcatcaac
agtctcatcctgtcactgtccaggcctatccccatcacggactatgtgttcatggcgatc
tacacagcagagatggctatccgagtggtggcgagtggcttcatcaggcggaagcactcc
tatctcagggacatgtggaacgttatagactttctcgtcatttttctcgcgtatgcaacc
ctcttcggagacttcagcaacctttcgggcctgcgcactttccgaatcctccgcgccttg
aagacggtctccatcattcgaggtgacacgtcttcctttgaagaaagctatgacccggaa
ccatccggctctcaggacttttctctgggtatcaacgggttgaaacaggccgtgcaagcg
ctactgaagtccatgaagatgcttctcaacgtgttgacgctcatcctcttctgtctcatc
gtcatcgcgctgttcgccctccagctgtacatgggcgtcctcaccaacaagtgcgtcagg
aacctccccaccaacgtcaccaacgtcacgcacgacttctatgctgcttacacttggaat
aaaactaattggcagcccggccgcgaagactggaaatttcaagtctgcggaaatgtgtcg
ggtgcagggacatgcgcggaaaactacacgtgtcttggagacatcgacggtaatccagac
tacacgagcttcgacaactttggctgggggctcctcatgtccttcgagctgctaacactg
gattacttcgaaaacgtgtatgacttggtgatgcgcgcatacggtccctggaacatgatt
ttctttgtggcggtgacgtttttcgggtcgttctacctggtcaacctcatgttggctgtg
atcgccatgacgtaccaagaacagaagagacaggacatggagcggaagaggaagatgcta
gaaacaggagaagagagctggatgctgaaattcagcagaaaaccgtacgagatgtggtat
atactcgagggcgtgaaattaattgcactcaccaaagagagacttagcctgctgaacatg
caaattagacaaagatttcaaaagagaaaactagcccatctccggaaaatcgcgaaaagt
gccggcaggcagacggtagaggccgaggagaccccgccggtggaaatcccgttggtggag
cagaactctacggagaacgtagccagtgcggaaggtgggcccaggaactgctgtgtggga
ccctctcactacacatgtataaccgtagaaccaccagggtcaccgctacgtcatcagaac
accaatggctacgacatggagtatatcaagtcgacgtgcagttgccatagagaccggtca
ctgcagaaccaagaaaacaacgtgccgcctgcgtccgccatcttggctatgagtgcggca
tcaaccaccagccccaatggcgaagcagagcaaggagattccaccgatgggaagtgctgc
cgagctctgaagataaagaaggagaagtgtgtctcgttcctgttcgactactgctgtgag
tgggtctgctgcacctccagttgctggagcaagtttcagcactacgtcgacagggtggtg
tcagaccctctcttcgacttcctcatcatgatctgcatcctcatcaacacggggttcctc
gcggtggaccaccacgggatgagtcagagcctggcaaagacgctggacgacgggaacaag
atttttacggcgatctttacggcggaggtgctgttgaagatgatggcctggactccaaag
aagtactttcaggactactggaacgtttttgactgttgcatcgtgttcatcagtctgata
gagtggggactagaaggagttgaagggctgtctgtactacgctcctttagattggcacga
gtgacaagagtgttgaagctggctaagtcgtggccgactatgcagcttctcctgaccatc
atcactaacagcatccaggacgtagggggccttacgttcctccttgtcgtcatcatctac
atcttcagtgtgttgggcatgcagatgttcggacaggattacaaagacaactatttaagg
ttacctgggaaggaagttcctaggtggaactttgtggactttcaccactccttcatgatg
gtgttccgggtcctctgtggggactgggtcaagccgctgtacgactgcatggcggtgtcg
gggtacggctgcgtcatcatgtacgtggccgcgctggctgtcgggaactttgtggtactg
aacctgtttgtcgcaatgctcttgagctcctttgcctcggaggaactcagcagctttgag
aacaacaccaacagcatccaagacggcatgaagaggctcaaggagatcttcggcctcaac
ggactcttcaacagctgcagaaaccctaagaaacagaaagacgactccgtcataacagtg
gacagaaagaaccttctaaaatacctccacgaaagaactcacaccaaattgtcccttgtg
tcggacaagagtgaccacagcgtacaggactgttttccttcggtcattatgagacttcgg
tgttggaagaagttcagcatgagcaagtttgggagatactgggccaagtttaggttaaag
accctcaagatcgtagacaataacatctttgagggctttatcttagtcatcatcttagcc
agcagtatattactggcattcgatgacatctatctggacaccagaccaaccctacagaag
gtgttggccatactggacatcatctttgcccttatttttctcattgagatgcttctaaaa
tggatagcttacggctttgtcaaatatttcaccaatgggtggtgtgttcttgactgtgtc
gtggttgcggtaggtctacccgtttcgttgttcagcatagctctggagtccaccaccaag
tcggcaaacctgtcggctgtgaggtccctgagagtgttccgggcgctgcggccgctaagg
gctatctctagatggcaaggcatgaaggtggtggtgagcgccttgctgcacgcagtaccc
gccatcttcaacgtcctgctggtctgcgtggtgttctggctcatcttcggcatcatgggc
gtccagctgttctccgggcagttcttcaagtgcctggaccacgagggggagaggatcccc
gccacgctcatcaacgacaagacggcctgcgtcaccggcaacttcacctggatcaactcc
aaggtcaacttcgataacgtgggggcggcgctgttggcccttttccaagtggcaacgttt
caaggctggatagaaatcatgcacgatgcagtggacgtcagaggggttgacatgcagccg
tcccgggaggctaacccgtacatgtacatctactttgtcgtgttcgccatctttggatcc
ttcttcacgctcaacctcttcatcggagccatcattgacaacttcaactcactcaagaga
aagtacgaaggcgaggggtacctggacatattcctgacgtctaaccagaagaagtactac
aacacgctgaggaaactcagcgacaagaagccgcaaaaaatcgtcagtcgacccaagata
aggtggagggccgccatctttgatttcgccctcagcaaggaaatggaaatagcggtcatg
ggggccatcgggctgaacatggtcgccatggcaatagaacactaccaccagacagaggtc
atcacgcatgtcctgtgggtcattaacctcgtcttcacggggttgttcaccctggaagcc
atcgtcaagctgatcgggatgggcaaccagtacttccggttaccgtggaacgtttttgat
ttctgcatagtagttctgtctatcctgggatttcttctggaggatgtcctgaagagcaga
tttctgacgccgacgctcctgagagtggttcgtattttccgtatcgggcgagtgttgcga
ctcatccgcgcggccaaggggatcagtcgcctcctgttcgcgctgctcatctccctcccg
gcgctcttcaacatctgcatcctcctccttatcgtcatgttcatcttcagcatcatgggg
atggtctccttcacgcacgtgcaccacgagggcatgctggacgagatcgtgaattttgaa
accttcggacggtccatgatgctcctcttccggttgaccacttccgccggatggaacgac
atcttggaaccgttgatgaagtactgcgacaccagtgagcccgaccacgacgggctctgt
agtggtacaaccatacccgcgctgtacttagtgagctacatcatggtcagctctttgatc
ataaggaacatgtacatagcagtaggtctggagggcttcaaccaggcgcaggaacaaaaa
cacgtcgggatcaccgaagacgacttcgagtctttttacatggtgtggcagaggtacgat
cccgacgccacgcagttcattgactacactcttttaaccgatcttgtggacgaactggac
gatccactacgattgcgtaaaccgaacaatatcaagttacagacgctagacattcccttg
gtcagcggggaccgcgtccactgtatagacgtcctgaaagagctgaccaccttcacgtat
aagcggctctggggagacgtagagaacacggatgagttcggggaaatcatggatcagatg
gaggacactttcaagaagtctttccccaccagagtgaacgaggtcgtcgtgacgaccacg
gcacgcagggaacgagagttccgggcagcggttttgatacagagggcgttcagaaaccat
cagacggcgaaatgggccgaacttttgaaaagttttactattcacgaaacgactgtatga
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