KEGG   Branchiostoma floridae (Florida lancelet): 118404033
Entry
118404033         CDS       T01074                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    118404033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfo03400]
    118404033
DNA repair and recombination proteins [BR:bfo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     118404033
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_IP5PC_F Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_DCAF4 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st WD_LRWD1 WD40_RFWD3 RAWUL Beta-prop_VPS8 WD40_like
Other DBs
NCBI-GeneID: 118404033
NCBI-ProteinID: XP_035658852
UniProt: A0A9J7KHG7
LinkDB
Position
17:complement(14556468..14579490)
AA seq 685 aa
MAVHHRQTSASAKKKVQVSYIIRDEVEKYNRSGVNALQLDFLQKRLFTSGRDSIIRIWNV
NNLSSKHDPYIQSMEHHTDWVNDIVLCCNGRTLISASSDTTVKVWNAHKGFCMSTLRTHK
DYVKALAYARDKEQVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLTGNKDSIYSLAMN
HYGTIIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLVNRDGTQCLSGSSDGTIRLW
SIGQQRCIATYRVHDDGVWALQANEAFSTFYSGGRDRRVYQVDMRNPENRFLLCEEKGPI
VKLLLTQDNSHIWAATTQSSVNCWPISNQPARVSGDYDNENPVPVYTQPEGTVKGGPSIT
QYYILNDKRHILSRDTNGHVVLWDVLKACKVEDLGKADLEEEIKARSKMVYVPNWFSVDL
KTGMLCIHLDESDCFAAWVSAKDVGFGSNDGSDPKLNFGGLLLQALLEHWPKTHTLEEED
HSNNTAVLNGNADTTDVTVRVGGSVTKGNGYFSVPGHTPVIFSEVGGRTLFSGCTSRLLC
RDAGAETEGMLLNDTVPAWVIDITVDKNMPKFQKIPFYLQPHSTSGAKTLKKDRLSASDM
LQVRKVMEHVYEKVLGADNISQNTASSGGEKPEQEKEEDISSLAEEKIELLCQDQVLDPN
MDLRTVKHFIWKSGGDLTLHYRQIK
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggcggtgcaccaccggcagactagcgcttctgccaagaagaaagtgcaggtgtcgtac
ataatccgggatgaagttgagaagtacaacagatccggggtcaacgccctgcagttggac
ttcctgcagaagcgcctgtttacctccggcagggactcgatcatccgcatctggaacgtc
aacaatctctccagcaagcatgatccatacatccagtccatggaacatcacacagattgg
gttaacgacattgtactgtgctgtaacggacgcacattgatttcagcttcttcagacaca
acagtgaaggtgtggaatgcacataaggggttctgtatgtcaactttgaggactcacaag
gattatgtgaaagccctagcctatgccagggacaaggaacaggtggcttcagctgggctg
gacagacagatcttcttatgggatgtcaacactcttactgcactcactgcctccaataac
acagtcacaacttcttctctgaccggaaacaaagactccatctacagcctggccatgaac
cactatgggaccatcatcatttctgggtcaacagagaaggtgctaagagtgtgggatcct
cgtacctgtgcaaaactcatgaagctgaagggacacacggacaatgtcaaggcactactg
gtcaacagagatggcacacagtgtttatctggaagttcagatggcacaatccggctgtgg
tccattggtcagcagcgttgcatagcaacctaccgtgtccatgacgacggggtgtgggca
ctccaggcgaacgaggcgttcagcacgttctactcgggcggacgcgacagaagagtgtac
caggtcgacatgagaaatccggaaaacagattcctgttgtgcgaggagaaaggaccaatc
gttaagttgttgctgacacaagacaactcccatatttgggcggcgaccacccagtccagc
gtgaactgttggccgatctctaaccagcctgcgagagtgtctggcgactacgataacgaa
aaccctgttcctgtctatacacagccggagggaacagtcaaaggtggccccagcattacc
cagtattacatcctaaatgacaagagacacatcctgtcccgcgacactaacggacatgtg
gtgctctgggatgtgctcaaggcatgtaaggttgaggatctgggcaaagctgatctggag
gaagagatcaaggccagatctaagatggtctacgtccccaactggttctctgtggatctc
aagacagggatgctgtgtattcacctggacgagtcagactgttttgctgcctgggtgtcg
gccaaggatgtcggcttcgggagtaacgatggctcagatcctaaattaaattttggaggc
ctcctactccaggctctgttggaacactggcccaaaactcacacactggaggaggaggat
cactctaacaatacagctgtactgaatggaaacgcagacaccactgacgtgacagtgcga
gtgggcgggagcgtaactaagggcaacggttacttcagcgttcccggacacacgccagtc
atcttcagcgaagtcggagggagaacgcttttcagtggctgtacttctaggttgttgtgt
cgcgacgcgggcgcagaaacggaggggatgcttctcaacgataccgttcccgcctgggtc
atcgacatcactgtagataaaaacatgcccaagttccagaagattccattctacctacag
cctcattccacatcaggagccaagacactcaaaaaggaccggttatcagccagcgacatg
ttgcaggtgaggaaggtgatggagcatgtttatgagaaggttcttggagcagacaacatc
tcgcagaacacagcatcgtcgggaggagagaaacctgaacaggagaaggaagaagacatc
tcttcactggcagaggagaaaatagagctactgtgtcaggatcaggttttggaccccaac
atggacctccgtactgtcaaacacttcatctggaagagtggaggggacctcacattacat
tacagacaaatcaaatag

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