Branchiostoma floridae (Florida lancelet): 118404186
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Entry
118404186 CDS
T01074
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfo03009
]
118404186
04121 Ubiquitin system [BR:
bfo04121
]
118404186
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
90S particles
Other 90S particles
118404186
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118404186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR19_1st
NBCH_WD40
eIF2A
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
118404186
NCBI-ProteinID:
XP_035659103
UniProt:
A0A9J7HGV0
LinkDB
All DBs
Position
17:complement(14020164..14041926)
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AA seq
445 aa
AA seq
DB search
MKIKMLSRNPDDYGRETKRDIQRLPRNYDPSLHPFEAAREYTRALNATKLERVFAKPFVG
ALDGHRDGVNCMAKHPGSLSTLLTGACDGEIKIWNLASRDCRRTIQAHSGFVRGLCVTPD
HSNFLSIGDDKTIKMWSLTSPDAGEEEEPVHTILGKNIFTGIDHHWKDTTFATCGQTVDI
WDHARAEPLRSFSWGVDSLNCVRFNPIEKHYLASCAADRSIILYDTRGSSPLRKVILNMR
SNVIAWNPMEAFVFTVANEDHNLYSFDIRRLTSPFNIHMDHVNAVLDLDYSPTGREFVSG
SFDKTIRIFPLDKGRSREVYHTKRMQRVFCIKWSLDNKYILSGSDETNVRIWKAKAAEKI
GKLTPREESALSYNDKLKEKFQHHPQVRRIARHRHVPKEVHHLTRQTRIMKDSRRRKEQN
RIRHSKPGSIKKKREREKVVVAEQE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaagatgttgagtcggaacccggacgactacgggcgggaaaccaagcgggac
atccagagattacccaggaactatgacccgtccctccatcccttcgaggcggcgcgggaa
tacacacgagcgctcaacgccaccaaactggagcgggtcttcgccaaaccgttcgtcggt
gctctggacggacatcgtgatggagtgaactgcatggcgaaacacccggggtcgctgtca
acactgctgactggggcatgtgatggggagatcaagatctggaatctggccagtcgagac
tgcagaagaacgatccaggcgcactctgggtttgttcgcgggctgtgcgtcaccccggat
cacagcaactttctgtcgatcggagatgacaagaccataaagatgtggagcctgacatcc
ccggatgctggggaggaggaggagccggtccatacaattctggggaagaatattttcacc
ggaattgaccaccactggaaggacacgacctttgccacctgtgggcagactgtagacatc
tgggaccacgcccgggccgaaccactccgctccttctcatggggggtggacagcctcaac
tgtgtcaggttcaaccccattgagaaacactacctggccagctgtgcagcagacagaagt
atcatcctgtatgacacgcgggggtcgagccccctgaggaaggtcatcctcaacatgcgc
tccaacgtgatcgcctggaaccccatggaggctttcgtcttcactgtggccaacgaggac
cataatctgtacagttttgacatccgacgcctgacctccccatttaacatccacatggac
catgtgaacgcagtgttggatctagactactctcccactggtcgcgagtttgtttctggc
agcttcgacaaaactatccgcatcttcccgctggacaagggacgcagcagagaggtgtac
cacacaaagcgtatgcagagagtgttctgtatcaagtggtcgctggacaataagtacatc
ctctccggttctgatgagacaaatgtgcgaatctggaaggcaaaggctgctgagaagata
ggcaagttgacaccgcgggaagaatcagcgttgtcgtacaacgacaaactgaaggagaag
tttcagcaccacccacaggtgcgacgaatcgcgcgccaccgccatgtgccgaaggaggtg
caccatctaacacgacagacaagaattatgaaggattcgcgcaggagaaaggagcagaac
agaatacggcacagcaaacctggcagcatcaagaagaaacgggagagagaaaaagtcgtg
gtggcagagcaggaatga
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