Branchiostoma floridae (Florida lancelet): 118404369
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Entry
118404369 CDS
T01074
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118404369
04091 Lectins [BR:
bfo04091
]
118404369
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118404369
Lectins [BR:
bfo04091
]
C-Type lectins
Others
118404369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
PLAT
GPS
ATS3
Motif
Other DBs
NCBI-GeneID:
118404369
NCBI-ProteinID:
XP_035659332
UniProt:
A0A9J7KHT6
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Position
17:complement(15447876..15462906)
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AA seq
1320 aa
AA seq
DB search
MDDLYLNKLMPEFSDQEIFADFSLSKLHLRIKRENRTRISGRVYLVKGDSDSLVRVPSFQ
NLLDGSCDGNQDVGIQFLESNFNPFEYSNNSQEIRTDVTGLEVKCGNRTLPVSGLSEPID
ILTRRKNESLDGSVYVFKTSVSLGNLTVFEFLVGKEQSTLGFYIDFNSTRFPQDVSLFLC
KDCVPTQDAFNWTATLPVSEDQIVSVPWINGTNLTSSPYQWLLHGEEVDITGYDVGNLTK
FGIGVQFGSDLDLDEEEIIDFSLTVFESSCVYFDEEVHLWHSDGCEVGPLTNMTHIHCRC
DHLTKFAGFVPPNPLNIAEALSANVLENPAGMVLVLAVFALYLFGILLTRKADRRDLLKA
GVGILPGHTLNPRKECQYVITVYTGFRGNAGTTAEVTIVLGGLTNESIPFKLRDEKRVLF
EKGSVDSFLLSTEEPLGELSHLRVWHNNKGYSPGWFLSQIVVTNRARNNTTYFLCNRWLS
VEEDDGKVHRIIPRAVPEDLKKFRNLFLAKSARDMNDGHMWFSVVGRPARSPFTRVQRLS
CCLTLLYSTMLTNIMFFGRGDDFEPPEPIRFAGVEINPPISLPQIMIGVQSAAIILPVNV
LIAFLFRNSGPRGDKSTDKKAQKDGAGDGGKAKSSLPWWTAYIGWLLVWSASFVAAFFTV
LYTLSFGRAKAEAWLVTFLTSFMTDLFLMQPFKLLIVAVIFALISKTPVEDDEPAAEPLE
SGEEFLHPVTPDSNKKQDTCLDSPLDESTLAEQRQKSAEKRKRRAAVLEVLVFGLFIAVV
MATSYGERSPMAFYMTQNVGRQILETGDVGFFEIDDIPSFWTWITTGLMPALHVRSWYNG
RVNPDAMLLTDMVTYPLGPVQLRQVRLGPGQHCAPPDQMLNVTSRCRVPYTLSVADTQNY
SLHWVTVNTTANGTDNTVCSPSSSQTSRELHNCANNVSPWRYTYASLTDGIPYFGQHGSY
ISGGYIAWLGTTDESMTFLKRQSWLDENSRAVFIELILYNPHVNLFSVVSLVVEFSNLGG
VYKSSEIVTVRLIQHDVILLLVLRGVLALFLLYFVFREGKSLLSRPLEYLSEFWSWVELL
VITIGFSTLVIYFYTQNIIDEVAEQRRNGNSVFHLYKSSVSWFQISTYLQGFLICCATLK
FIRLLRFNSHVYALSMTMKKSLKPLMSFMFSVAVILFAFILVMALTLGSKISDYKNISST
LQSLLLMMLGSFDFDALSSGHRILGPLVFFLYQVVMQFILLSIFMVILFDVYENEAHSEN
PHDIGFTSYLKETAAETVQRIKNTSFKIERKKPKMERRFSTNMIPKIYSGLRHLNSDSTI
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctttaccttaacaagctgatgccggaattctcggatcaggaaatcttcgcc
gatttttctttatcaaagttgcatctcaggattaagcgggagaatcggacgaggatctcg
gggagagtttaccttgttaaaggggacagcgactctctggtcagggtaccttccttccag
aatttgctcgatggttcttgcgatgggaatcaggatgtgggaatccagttcttagagtcc
aacttcaacccgttcgagtactccaacaactcgcaggagatccgtactgacgtcaccggt
ctggaggtgaaatgtggtaaccggacacttccggtttccggtttgagtgaacccatcgac
atcctgacaagacggaagaacgagagtctggatggatccgtgtatgtcttcaagacgtcg
gtatcactcggcaacctgacagtgttcgagttccttgttgggaaggaacagtcaaccttg
gggttctacatcgacttcaactcaactcgatttccccaagacgtttcgctatttctttgc
aaagactgtgtacctactcaagacgccttcaactggacagccacgctgcccgtttctgaa
gaccagatcgtctcagttccatggataaacggaacgaacctcacctccagcccctaccag
tggctgctgcatggggaggaggtggacattacaggctatgatgttgggaacctcacaaaa
tttggcattggagtgcagtttggctctgatttggacttagatgaagaagaaatcatcgat
ttttctttgaccgtctttgagtcatcctgcgtttacttcgacgaagaagtgcacttgtgg
cacagcgatgggtgcgaagtcggcccgctgaccaacatgacgcatatccactgccggtgc
gatcacctgaccaagtttgccggctttgttccgccgaacccgctcaacatcgcggaggcg
ctgtccgcaaacgtcctggagaatccagccggaatggtgctggttctggccgtgttcgcg
ctgtacctgtttggaatactgttaacaaggaaggcggacagaagagacttactcaaggct
ggagtgggaatacttccgggtcatactctgaacccgcggaaggaatgtcaatacgtcatc
actgtgtacaccggcttccgggggaatgctgggacaactgctgaggtaacaatagtcctc
ggtggacttaccaacgagagcatccccttcaagctgcgggacgaaaagcgggttctgttt
gagaagggaagcgtggactcgtttctcctgtctacagaagaaccgttgggagagctctcc
catctgcgcgtgtggcacaataataaaggctacagtccgggatggtttttgagccagatt
gtggtgacaaacagggcaagaaacaacacaacgtattttctgtgtaacagatggctgtct
gtggaggaggatgacgggaaggtccaccgcatcatccctagggctgtacctgaggacctg
aagaagttccgcaacttgttcctggccaagagtgcaagggacatgaatgacggccacatg
tggttctcggtggttggccgccctgcccggagcccgttcacccgtgtccagcgcctgtcc
tgctgcctgacgctgctctacagcaccatgctcaccaacatcatgttcttcggccgcggg
gacgacttcgagccaccagagccaatcagattcgctggggtggagatcaacccgcctatt
tcgcttccgcagatcatgatcggcgtacagagtgcagccatcatcctacccgtcaatgtt
cttatcgccttcctgttccgtaactccggtccgcggggcgacaagagtacggacaagaag
gcacagaaggacggggctggggatggtggaaaggccaaatcgtcgctgccctggtggact
gcctatataggttggctgctcgtgtggtcggctagtttcgtggcggcgttcttcaccgtg
ctgtacaccctgagtttcggacgggcgaaggcggaggcgtggctcgtcacctttctgacg
tcattcatgaccgacttgttcctgatgcagcccttcaagctgctcatcgtggcggtcatt
tttgctttgatatcaaagacacctgttgaagatgacgagcctgccgccgaacctcttgag
tccggtgaagagtttcttcatcctgtaacaccggactccaataagaagcaggatacttgc
ttggactcacccctggacgagtccactctggctgagcagcggcagaagagcgcagagaaa
cgcaagaggcgcgccgccgtgctggaggttctggtgttcggtctcttcatcgctgttgtc
atggcaacctcatacggggaacggagccccatggcgttctacatgacacaaaatgtcggg
aggcagatactggagactggcgacgttgggttctttgagatcgatgatatcccgtcgttt
tggacctggataacaaccgggttgatgcccgcccttcacgtgagaagctggtacaacggc
agagtcaatccggacgccatgttacttacagacatggtcacctacccgcttggtcccgta
cagcttcggcaggtgcgattggggccaggacaacactgcgctccacccgatcaaatgctg
aacgtgacatcgcgttgtagagtgccgtacacactcagtgtagccgatacacagaactac
agcttacattgggttactgtcaacacaacagcaaacggaactgacaacacagtctgtagt
ccctccagctcacaaacatctcgagaactacacaactgtgcgaacaacgtgagcccatgg
aggtatacttacgcttcactcacagacggtatcccttatttcggacagcatggctcttat
atcagtggcgggtacatcgcttggctaggaacgaccgacgagtccatgacatttctaaaa
cgtcaaagttggctggacgagaacagtcgcgcagttttcatcgagcttatcctatacaac
ccgcacgtgaacctgttttcggtagtgtctctggttgtggagttcagcaatctcggggga
gtttacaagagttcggagatcgtaaccgttagactcatacagcatgacgtcatcttactt
ctggtcctgagaggggtgctggcgctgtttctactctactttgtatttcgtgaaggaaag
tctcttttatcacggccactggagtatctctccgagttctggagctgggtagagctgctg
gtcatcaccatcggtttcagcaccctcgtcatctacttctacacacagaacatcatagac
gaggtggcagaacaacgaaggaacggaaactccgtattccatctgtacaaaagctctgtc
agctggttccagatctcgacttacctacaagggtttctcatctgttgtgccacgttgaaa
ttcatccgcctgctgcgcttcaactctcacgtgtacgccttgtctatgaccatgaagaag
tctctcaaacccctcatgtcttttatgttttctgtagctgtcattttgtttgcttttatc
ctagtgatggcgttgactttagggtcaaaaatcagtgactataagaacataagttcaact
cttcaaagccttcttctgatgatgttgggtagttttgacttcgacgccctttcctcgggg
catagaatactcggaccgctggttttcttcttgtaccaggttgttatgcagttcatacta
ctgagcattttcatggtgattcttttcgatgtgtatgaaaatgaagcacactctgaaaac
ccacacgatatcggctttacatcctatctaaaggaaacggcagcagagactgttcagaga
atcaaaaacacttcgttcaaaatcgaaagaaagaaacccaagatggaaagacgattctct
acaaacatgattcccaagatatatagtggcctacgtcatctcaatagcgattcaactatc
tga
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