Branchiostoma floridae (Florida lancelet): 118404506
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Entry
118404506 CDS
T01074
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118404506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118404506
03016 Transfer RNA biogenesis [BR:
bfo03016
]
118404506
03012 Translation factors [BR:
bfo03012
]
118404506
04131 Membrane trafficking [BR:
bfo04131
]
118404506
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118404506
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118404506
Transfer RNA biogenesis [BR:
bfo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118404506
Translation factors [BR:
bfo03012
]
Eukaryotic type
Elongation factors
118404506
Membrane trafficking [BR:
bfo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118404506
Exosome [BR:
bfo04147
]
Exosomal proteins
Proteins found in most exosomes
118404506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
118404506
NCBI-ProteinID:
XP_035659513
UniProt:
C3YFS9
LinkDB
All DBs
Position
17:4175248..4184287
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGKYYVTVIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSEARFGEITKEVGAYIKK
IGYNPKSVAFVPISGWHGDNMIEESTNMSWFKGWSIERKSGKSSGHTLMQALDAIEPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNLTTEVKSVEMHHESLT
EALPGDNVGFNVKNVSVKEIRRGYVAGDSKNDPPKEAASFIAQVIVLNHPGQIQAGYAPV
LDCHTAHIACKFAELKEKCDRRSGKKLEDNPKSVKSGDAAIVEMLPSKPMCVEAFSSYPP
LGRFAVRDMKQTVAVGVIKSVNKTEKAGKTTKAAQKAAGGKKK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagcttcacatcaacatcgtggtcatcggccatgtcgactctggcaag
tccacctccaccggtcacttgatctacaagtgcggtggcattgacaagcgtaccattgag
aagttcgagaaggaagctcaggagatgggcaagggctccttcaagtacgcctgggtgctg
gacaagctgaaggccgagcgtgaacgtggtatcaccatcgatatcgccctgtggaagttc
gagaccggaaaatactacgtaactgtcattgatgcccccggacatcgtgatttcatcaag
aacatgatcacaggaacttcacaggctgactgtgccgtgctgattgtggctgctggtact
ggtgagttcgaggctggtatctccaagaacggacagacccgtgagcacgccctgctggcc
tacaccctgggtgtcaagcagctcatcgtgggagtcaacaagatggactccaccgagccc
ccctactccgaggctcgcttcggtgagatcaccaaggaagtaggtgcctacatcaagaag
atcggctacaaccccaagtccgtcgcgttcgtgccaatctctggctggcatggcgacaac
atgatcgaggagtccaccaacatgtcctggttcaaggggtggtccatcgagcgcaagtcc
ggtaaatcctcgggccacacattgatgcaggccctggacgccatcgaacctccgtccagg
cctactgacaagccccttcgtctcccactgcaggacgtgtacaagattggcggtattgga
actgtgcccgtcggccgtgtggagaccggtatcctgaagccgggcatggtggtgaccttt
gctcccgtcaacctcaccactgaggtcaagtccgtggagatgcaccacgagtctctgacc
gaggccctgcccggtgacaacgtcggcttcaacgtcaagaacgtgtccgtgaaggaaatc
cgtcgtggctacgttgctggtgacagcaagaacgacccacccaaggaggctgccagcttt
attgcacaggttatcgtgctgaaccacccaggccagatccaggccggctacgcgcccgtg
ctggattgccacaccgcccacatcgcttgcaagttcgccgagctcaaggaaaagtgtgac
cgtcgttccggcaagaagctggaagacaaccccaagtccgtgaagtccggcgacgctgcg
atcgtcgagatgcttccgtccaagcccatgtgcgtcgaggccttctcttcctacccgccc
ctgggtcgtttcgccgtgcgcgacatgaagcagaccgtggccgtcggcgttattaagtcc
gtcaacaagaccgagaaggccgggaagaccaccaaggccgcccagaaggctgccggcggg
aagaagaagtga
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