Branchiostoma floridae (Florida lancelet): 118404522
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Entry
118404522 CDS
T01074
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2-like isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118404522
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118404522
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118404522
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118404522
mRNA cycle factors
Stress granule specific factors
118404522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
118404522
NCBI-ProteinID:
XP_035659543
UniProt:
A0A9J7KGX9
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All DBs
Position
17:1449019..1469163
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AA seq
724 aa
AA seq
DB search
MSQLPQTASPTLPGAPPAGAPPAQGGMNPAPGIITPTQGAAGVSPAVTGSTLANGTVVTG
HPAVPSNMANPKEKTPMCLINELARYNKIQPQYKLITETGPAHQKTFTISLTLNDKTWSA
EGSSLKKAQHAAASKALDTCNLPWPKPKPPRNQELTDGDVPVGSITPTVELNGLAMRRGE
PAIYRPIDPKPTIPPQYRPNYNFRGIYNQRYHYPTPKTFYVSLTIGNREFIGEGRTRQQA
RHNAAAKALKVLKDEPIPETTDPPQPAPDVLANEKAENLLKPEITLVYEIARKRNMSVSF
EVVKESGPPHMKTFVTSCKVGDFVAEGEGNGKKVSKKRAAQKVLEQLKVLPLLHDDGGSR
QNKRYNKKRPKSLIKVGLNSWIEADMNELNQTNPDYGQGINPVSRLIQIQQARKEKEPEF
SLVAERGLPRRREFVMQVTVKDKVCTGIGPNKKLAKRSAAEAMLQLLGYRNALSNMQPGK
PALKTGDGQGDGPGNGRKVKFVDQTAEVKDGHGDSPSILSRQLAPGLLPMPQEMVRSTGG
NGMGLPGVNIPQRGLNRAPGAPLSPRSPQLTSAAIAKELLTIGTSPTAEAMVQSGVTGMP
QGQQVPPKQQLAYLAKVQGFRVDFTDFPKGNKSEYLSLVSLSSNPPLVSHGAGPTVEAAH
DQAALNALKSLMDMGLDRVDGEGGGDKAEGVQEETPSVSEHKQANSADADMAGSLEPVVK
TESK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgccgcagacagcctctccaactctcccaggagcccctcctgctggtgca
ccccctgcacagggggggatgaatcccgccccagggatcatcacccccacccagggggca
gctggggtctcccctgctgttactgggtctacacttgccaatggcactgttgtgacaggt
catcctgctgtcccctccaacatggcaaaccccaaagagaaaacccccatgtgtctgatt
aatgagttagcccggtataacaagatccaaccacagtacaagctcattactgaaactgga
ccggcccaccaaaagacctttaccatctccctgaccttgaatgataagacatggtcagct
gaggggtcgagtctgaagaaggcccagcatgctgctgcctccaaggctctggacacctgc
aacctgccctggcccaaacctaaacctcccaggaaccaggaactcacagatggggatgtt
ccagttggtagcatcacccccaccgtggagctgaatggcctggccatgaggaggggggag
cctgccatctaccggcccatcgaccccaaacctaccatcccaccacagtaccgacctaac
tacaacttcagaggaatatacaaccaaagatatcattatcccacaccaaagaccttctat
gtgtccctgaccattggtaaccgggagttcatcggggagggccgcacccggcaacaggcc
cgacacaatgccgctgccaaggcactgaaggttctaaaggacgagccaatccctgagact
acggacccgccccagccggctccggatgtactagccaatgagaaagcagagaatttactg
aagccagagatcaccttggtgtatgagattgctcggaagaggaacatgtcggtttcattt
gaggttgtgaaagagagtggacctccccacatgaagacctttgttaccagctgtaaagtt
ggagactttgtggcagaaggagaagggaacggcaagaaagtctccaagaaacgggcagcc
cagaaggtgttggagcagctgaaggtcttgcccctccttcacgatgacgggggttcccgt
cagaataaacgctacaacaagaagaggcccaagtctctgatcaaggtgggcttgaactct
tggattgaggcagatatgaatgagctgaatcagaccaacccagactatggacaaggcatc
aaccctgtcagtcgactcatccagattcagcaggccaggaaggagaaggaaccagagttc
tcattggtggctgaacggggactccctcgccgccgagagtttgtcatgcaggtaacagtc
aaagacaaagtttgtactgggattggtcccaacaagaagttggccaagcgtagtgcagca
gaggccatgttacagttgctcggatacaggaacgccttgtccaatatgcagccaggcaag
cctgccctcaagacgggcgacggtcagggtgacgggcccggaaatggtcgcaaagtcaag
tttgtggatcaaacggcggaggttaaggatggccatggtgacagcccctccatcctgagc
cgacagctggcacctggactcctccccatgccacaggagatggtacggtccacggggggc
aatggcatgggactgccaggagtaaacatcccccaaaggggtctaaacagggcccccgga
gcccccctcagcccccggagcccacagttgacgagtgcagccatcgctaaggagttacta
acaattgggacgtcccctactgctgaggcaatggtacagtccggtgtcacggggatgcca
caaggccaacaggttcctcctaagcagcagcttgcctaccttgccaaagtgcagggcttc
agagtcgacttcacagattttccaaagggtaacaagtctgagtacctgtcgctggtgtcc
ctctcctctaaccccccgctagtgagccatggcgccggcccaactgtggaggcagctcac
gaccaggctgcactcaacgctctcaagtctctcatggacatgggactggaccgtgtggat
ggggaggggggcggggacaaggctgaaggagtgcaggaagagacgcccagtgtgagcgag
cacaaacaggctaactcagcagacgcagacatggctggctcgctggagcccgttgtcaag
acggagtccaagtga
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