Branchiostoma floridae (Florida lancelet): 118404684
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Entry
118404684 CDS
T01074
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118404684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118404684
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
118404684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
118404684
NCBI-ProteinID:
XP_035659820
UniProt:
A0A9J7HK90
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All DBs
Position
17:complement(12972484..12991126)
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AA seq
724 aa
AA seq
DB search
MAGSPKEAMVLVVDVGPLMAQAPPGHVTPLENAKDAISMLLQRKMFSQSKDEVALILLGT
QETANELAGTDDESYLNITVARPLGQPDFDLLEFVKNDIVPGPVSADFVDAIVVALDLVR
NQTMGKKFETKRIVLFSNLAGEFTDDQLEGVINGMKALECEFNLIGLSLDDDDEDGDMPD
QNGAGPPRKERTPQQRAGTALIRHVIEEVDGVAYSESEALQMLSFFQKRNVRAAPWKVML
EVGTNLKIPVRGFIRVKECKPNSFKKVHARTLSKDDIHTTHEHRLNDDEETPVESTIDGY
RYGNTIVPFSTDDESQMKFKTDAKCFDVLGFTRADNVKRQYYMGDSVRCFVAEEGDEPAA
VALSAFIHALYETNMVAIVRYVYNKNSAPKVAFLTPHIKPNYECLLCIMLPFMEDMRKYT
FSSLHPNNKNQPSDDQLSAVDDLIDNMNLVMPDKDEDGKQQQYLKPKLTFNPHLQRLYQC
LSARALNPDDPQLPPPNQTILNYLQPQQDLLTQAQPCVDKIKAAFPLEVVTKKKEETTAQ
NIFGGGDDAEPAAKKPRLDTDAGGDGGLTMAGLAQGPVTEVGSVRPLEDFRAMISRKDDD
KFMEASAQLQKRIEEIVMESFGDQFYGKAMECLLALRKESAKLGEPDQFNTFLRGFKETL
FNKGRKDFWDCMVREKVTLISSEESSETSVSKEEAGKFLEIVEQKTEEPEEMEEAEAEDL
LAMM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggccggtagtccgaaggaagccatggtgctggtggttgacgttggccccctcatggcg
caggccccccctggacatgtcacccccctggaaaacgccaaggatgccatctccatgctg
ctgcagagaaagatgttctcccagtctaaggatgaggtcgcgctcatcctgcttggtacc
caggaaacagccaatgagctggcaggaacagacgacgagagttacctgaacatcacagtt
gcgcggccgctaggacagccagacttcgacctgcttgagtttgtaaagaacgacattgtt
ccagggcctgtgtccgctgactttgtggacgccattgtggtggcattagacctggtgcgg
aaccaaaccatgggaaagaagtttgagacaaagcgaatcgtcctgttctcgaacctggcg
ggagagtttacagacgatcagctggagggagtcatcaacgggatgaaggcactggagtgt
gaattcaacctcattgggctgtcccttgatgatgatgatgaagatggcgacatgcctgac
cagaacggggccggaccccccaggaaggagcggacgccccagcagcgggcaggcacagcg
ctgatccgccacgttatcgaggaggtcgacggggttgcgtactccgagagtgaggccctg
cagatgctaagtttcttccagaagcgaaacgtgcgggccgctccttggaaggtcatgcta
gaggtcgggacaaacctcaagattccagtccgagggttcatcagagttaaggagtgcaag
cccaactcctttaagaaagtccatgcccgcacgctgagcaaagacgacatccacacgact
catgaacacagacttaacgatgatgaggaaactccagtggagtccacaattgatggatac
agatatggaaacaccatcgtgcccttcagcacagacgatgagagccagatgaagttcaag
actgatgccaagtgttttgatgtcctgggattcaccagggcggacaatgtgaagagacag
tactacatgggagactctgtccgctgttttgtagcagaggagggtgatgagcctgcagct
gtagccttgtcagcattcatccatgctctgtatgagaccaacatggtggccatagtcaga
tatgtttacaacaagaacagtgccccaaaggttgctttcctgacccctcacatcaagccc
aactacgagtgtttgctgtgcatcatgttgccatttatggaggacatgcggaaatacacc
ttctcttcactccaccccaacaacaagaatcaaccatctgacgaccagctatcggcagtg
gatgacctcattgacaacatgaacctggtcatgcctgacaaggatgaggatggtaaacag
cagcagtacctgaagccaaagttgacctttaaccctcacctacagcggctgtaccagtgt
ctgtctgcccgagcgctgaaccctgatgacccccagctgcctccgccaaaccagaccatt
ctcaactatctccagcctcaacaggacctactgacccaggcccagccctgtgtggacaag
ataaaggctgcatttcctttggaggtcgtcaccaagaagaaggaggagaccacggcacag
aacatctttggtggaggggatgatgcagaaccggcagcaaagaagcccagactggacaca
gatgccggcggagacggagggctgacgatggcgggactggcgcaagggccggtcacggag
gtcgggtcggtgcgacctctggaggacttcagggccatgatcagtaggaaggatgacgac
aagttcatggaagcctcagctcagctacagaagcggatagaagaaattgtgatggagtcg
tttggtgaccagttctacgggaaagccatggagtgtttactggcactgaggaaggagtca
gctaagttgggagagccagaccaattcaacaccttcttgagaggctttaaggagacactg
ttcaacaagggtagaaaggacttctgggactgcatggtgcgagaaaaggtaacactgatt
tcatcagaagaatcttcagagacatccgtgtcaaaagaggaggcaggaaagttccttgag
atagtggagcagaagactgaggagccagaagaaatggaagaagctgaggcagaagatctg
ttggcaatgatgtga
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