Branchiostoma floridae (Florida lancelet): 118404885
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Entry
118404885 CDS
T01074
Name
(RefSeq) glycine receptor subunit alpha-3-like isoform X1
KO
K05195
glycine receptor alpha-3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04080
Neuroactive ligand-receptor interaction
bfo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118404885
04082 Neuroactive ligand signaling
118404885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118404885
Ion channels [BR:
bfo04040
]
Ligand-gated channels
Glycine
118404885
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF2721
SK_channel
Motif
Other DBs
NCBI-GeneID:
118404885
NCBI-ProteinID:
XP_035660162
UniProt:
A0A9J7HL64
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Position
2:complement(11127495..11175700)
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AA seq
566 aa
AA seq
DB search
MEMFCVHIMYVMSILAVTESQLDSLGRTTQDWASFKAGSLHPGLDGSDALVGDANWESWQ
VWRTGSPLPSGYQQSQRPNEQERWTDVSSSVHIRNIGWLSEEHSNLSTTIQYNLAWVDPR
LGGLAASWFPIPADLAWTPPISFGRNVRRTSVVDQGSKSDSGISMWLHRSGIMLYSITRT
LKLTCSVQLWRYPFDSQVCSVKLHGYNGVMFNVLTSNTSLQAPITTDATAVRSQYMLKAV
EIRLERSSFLNERPSCEYFSQKCDHDVEHCLNVASCRDDQVCQQCKSSVGRCSHRVNSCD
DQNDSNDYTTLEVRIHLKRRLLSYFFTTFIPCTVVVISSFLQTWLPLVPSAIAGRFVLGI
FAVLVMISGHNMRHLILRVSEARAIDIWIMACILFVTLALLQTVVLHFVYDRLKRKEKKA
SLERTPSFHIPRPHLNRPLSSWWYRLPNKQWMTMYNPYIPSSSGAVGVDMSAYEEKTTKS
KVKPLVNIPRAKFRQPSLASWEQLPSNQWKVQLNYGSRANTGELYEKDRLPRSEEMTRKI
DRASRIAFPCAFLVFNLWFWLFYLLF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgttctgtgtgcacatcatgtacgtgatgtctattttagccgttactgaaagt
cagctggacagtttgggtagaactacgcaggactgggcttcctttaaggctggctcgctg
cacccaggactggacgggagcgacgctttagtaggagacgcaaactgggagagttggcag
gtctggagaacaggcagtcctctgccgtctgggtaccaacaatcccagagacctaacgag
caagaacgatggacagatgtttcctcaagcgtacacatccggaatataggatggctgtca
gaggaacactcgaacctcagcacgacgatacagtacaacctcgcctgggtggacccgagg
cttggcggcctggcggcctcgtggttccccatccccgccgacctggcctggactccgccg
atatctttcggcaggaacgttcggcggacttctgtcgtggaccagggaagcaagtcggac
agcgggatttccatgtggctccaccgcagcgggataatgctttacagtataacgcgcact
ttgaaacttacatgcagtgttcaactgtggcggtatcccttcgactcgcaagtgtgtagt
gtgaaactgcacggatataatggtgtcatgttcaacgtactcacatctaatacaagtctt
caggctcccatcactacagacgctaccgctgtgaggtcacagtacatgctaaaagcggtg
gaaatcaggctagagaggagctctttcctgaatgaaaggccaagctgtgagtacttcagc
cagaagtgtgaccatgacgttgaacattgtctaaatgttgcctcctgtcgcgatgaccaa
gtttgccagcagtgtaaaagcagcgtgggacgatgttcacacagagttaacagctgcgac
gatcaaaacgattcgaatgattacacaacactggaagtgcgcatccatctgaaacgccgc
cttctgtcctacttcttcacaacgttcatcccgtgcactgtggtagtcatctcatcattc
ttacaaacatggctgccgctcgtcccatcagccattgcgggccgattcgtgttgggcatc
tttgccgttctggtgatgatatccggacacaacatgagacatctcattctgagggtgtca
gaggctcgtgcaatcgacatctggattatggcgtgtattctgttcgtcacactggccctt
ctgcagacagtggttctgcactttgtctacgacaggcttaagagaaaggaaaagaaggcg
tcgttggagcgcacgccatctttccacattcctcggccacatctgaaccgtcccctgagc
tcctggtggtatcgtctgcccaacaagcaatggatgaccatgtacaacccgtacatacca
tcttcatctggagctgtgggggtggacatgtctgcttacgaggagaagacaacaaagagc
aaagtcaaaccactggtcaacattccgcgagccaagttcaggcagccaagccttgcatca
tgggagcagctgccgagtaatcagtggaaggttcagctgaactacgggtccagagcaaac
accggggagctctatgagaaggacagactgccacgatccgaggagatgacaaggaagata
gatcgagcctcaagaatcgcattcccctgtgccttcttggtgttcaacctttggttttgg
ctcttctatctgctattctaa
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