Branchiostoma floridae (Florida lancelet): 118405079
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Entry
118405079 CDS
T01074
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118405079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118405079
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118405079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
118405079
NCBI-ProteinID:
XP_035660372
UniProt:
A0A9J7HLH9
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Position
17:17923752..17930037
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AA seq
282 aa
AA seq
DB search
MPTDSRRVPGPQDSRSPHWYGKHATRQEGDTRPDGRGDHDLRPVYLHAGVVSQATGSAYI
EMGQTKVIAAVYGPREIARREEFTMKGRLCCELKFATFACRRRRQHIQDNQEKDGALIVL
QALEPAVCLDRFPKSQVDVYITVLQDDGSALAAAITCAAAGLADAGVMMYDIVAGCSVRQ
CGERQLLDPSVGEELSQEGESAEDHGMVTVGLLPSLNQVSALTLDGHLQQQTAVQAVKTC
IGGCQGIYPILKDCLVTSTRKKIPALDPKSSHASTEGQNGQT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagactccagacgggtccccgggccgcaggacagccggtccccgcactggtac
gggaaacacgcgactcggcaggaaggcgataccagacctgacgggagaggagaccacgac
ctccgacctgtgtacctccacgcgggcgttgtcagccaggccacggggtcggcctacatc
gagatgggtcagacgaaggtcatcgcagctgtgtacggcccgcgggagattgctcggcgc
gaggagtttacgatgaagggtcggctgtgctgtgagctgaagttcgccacgtttgcctgc
agacggaggagacagcacatccaggataaccaggagaaggacggggcgttgattgtccta
caggccctggagcctgcggtctgcttggacaggttcccaaagtctcaggtcgatgtttac
atcacagtattacaagacgacggcagcgccctggcagctgcgatcacctgtgccgccgcg
ggattggccgatgcgggagtcatgatgtatgacatcgtggcggggtgttccgtgagacag
tgtggggagagacagttgttggaccccagtgtgggtgaggagttaagtcaggagggggag
agtgcagaggaccatgggatggtgacggtcggactgctgccatcgctgaaccaggtgtcg
gcactaacgttagacggacatctgcagcaacaaacagctgtacaggccgtgaagacgtgc
atcggtggatgccaaggaatctaccccatccttaaagactgcttagtcacgtctacaaga
aagaagatccccgccttggatccgaagtcgagccatgcgagcacagagggacaaaacggg
cagacatga
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