Branchiostoma floridae (Florida lancelet): 118405346
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Entry
118405346 CDS
T01074
Name
(RefSeq) thyroid hormone receptor beta-like isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04080
Neuroactive ligand-receptor interaction
bfo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118405346
04081 Hormone signaling
118405346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118405346
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bfo03310
]
118405346
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118405346
Nuclear receptors [BR:
bfo03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
118405346
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118405346
NCBI-ProteinID:
XP_035660688
UniProt:
A0A9J7KIJ2
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Position
18:11698958..11762828
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AA seq
431 aa
AA seq
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MDAMKENLSYFHEDTNSRNVTSSGYPSSIMDDNDMDKKGPYIPSYMDQNTPEPCVVCGDK
ATGYHYRCMTCEGCKGFFRRTVQKDLKYSCKYAGDCVVDKTTRNQCQECRFKKCVRVGMA
TDLVLDEQKRVAKRKLIEENRERRRSEEIRKISRLRADCVFTERDQYIVDHVTTSWLQTC
PKKVNRYYLNGSPKPGMPVPEAPRPPVVQNGVVREADSSGAMDDDMVDQDIFSHLAEVIT
PAIIKVVEFAKQIPGFTKLVPDDQVALLKNCCFEVMCLRAASRFDKQRRTITMFGGLTVT
KEQVSQGGLGRLAEPLFEFAEGLSQLHLDDTEVALLAALLVVADRPGVQDQESIDRLQDI
ILTAYKNYITRQRPHQPVLWGKILMKVTDLRALSVAHAEQVKLVKMECTNDIPPLFLEMF
ESSSPLFMKQE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatgaaggagaacctctcttactttcacgaggacacaaattcgaggaacgtg
acctcaagcggttaccctagctcaatcatggacgataacgacatggacaaaaaagggccg
tacatccccagttacatggaccagaacaccccggagccatgtgttgtatgtggggacaag
gccacaggctaccattaccgatgcatgacatgtgaaggctgcaagggcttcttcaggaga
actgttcaaaaagacctgaagtacagctgtaaatatgctggcgactgtgtggtggacaaa
accacacggaaccagtgtcaggagtgtcgcttcaagaagtgtgtcagggtcggcatggca
accgacttggttctggacgaacagaaacgtgttgccaagagaaaacttatcgaggagaat
cgggaaaggcgtcggtcggaagagatccgaaagatctcgcggctgcgggcggactgtgtc
ttcacggagagagatcagtacatcgtggaccacgtcaccacgtcatggcttcagacgtgt
cccaagaaagtcaacagatactatcttaatggtagtcccaaacccggtatgcccgtgccc
gaggccccgagaccgcccgtggtgcagaacggagtggtacgcgaggcggacagctcggga
gcgatggatgacgacatggtcgaccaggacatcttctcgcacctggcggaggtcatcacg
cccgccatcatcaaggtcgtggagttcgccaagcagattcccggcttcacaaagttggtg
cctgatgaccaggtggcgctgctgaaaaactgctgcttcgaggtgatgtgcttgcgggcg
gccagcaggttcgacaagcagaggaggacgatcaccatgtttggggggctgacagtcacc
aaagaacaggtttctcagggaggcctgggtagactggcggagcctctgtttgagtttgcg
gaaggcctgagccagctgcacctcgatgacacagaagtagctcttcttgcagctctattg
gtcgtagcagaccgtcctggagttcaggaccaggagtctatcgaccgactacaagacatc
atcctgacggcatacaagaattacatcacgcgccagcgcccgcaccagcccgtgctatgg
gggaaaatcctcatgaaggtcacggacctgcgggcgctgagcgtcgcgcacgccgagcag
gtcaagctagtgaagatggaatgtaccaacgacattccacccctcttcttagaaatgttt
gaaagttcttccccactgtttatgaaacaggaataa
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