Branchiostoma floridae (Florida lancelet): 118405452
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Entry
118405452 CDS
T01074
Name
(RefSeq) syntaxin-17-like
KO
K08491
syntaxin 17
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04130
SNARE interactions in vesicular transport
bfo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118405452
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118405452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118405452
Membrane trafficking [BR:
bfo04131
]
SNARE
Syntaxin (Qa)
Stx-sER
118405452
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C19orf12
SNARE
Gly-zipper_Omp
Motif
Other DBs
NCBI-GeneID:
118405452
NCBI-ProteinID:
XP_035660846
UniProt:
A0A9J7K8B6
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All DBs
Position
18:14700817..14710516
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AA seq
338 aa
AA seq
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MSSFDDFEESLKRPVADDAPKQPIKILEPALKNFTKIAIPHILEKLRTHKVNIEKYQRSG
KWDKLNAEQIDASRALQQLKATMRDMDRTRQQIRDEDVEAFDRRVTPVRDEAFRAVAKFM
EMYAEPQEPLADVEPVIIPHQIGKQGGAKNTNREVDRHDTSPDVSTVHLEQEQKQLPSIP
QDQPALQSWGNLREDQGEKVDRIQDHVEQAHGNVQSGVKDSGKYGTAPTPYSTFAYVFFQ
AAKYKAAMFPVAGALIGGVIGGPIGLVAGLKIGAGAAVGGGILGFAGGSMWKKRQAKQLD
IELDKMSDRQSQSYPDFKTTPSGDVTKSDTGYHRRPSA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttcgacgattttgaagagagcctaaagcggccagtggctgacgacgcacca
aaacaacccatcaaaattctggaaccagctttgaaaaacttcacaaaaattgccattccg
cacattttggagaaactgcgcacgcacaaggtcaatatagaaaagtatcagagaagtgga
aaatgggacaagttgaatgcagaacagatcgacgccagccgagctctgcagcaattgaag
gcgaccatgagggacatggaccgaacccggcagcagattcgtgacgaggatgtggaggcg
tttgacaggagggtgacaccggtgagggacgaggccttcagggctgtggcaaagttcatg
gagatgtacgctgaacctcaggaaccactggcagatgtcgaacctgtcattattcctcat
cagataggtaaacaaggaggtgcaaagaacacaaacagagaagtggacagacacgacacg
tcacctgatgtttccactgtacatctggagcaggagcagaaacaattacccagcattcct
caggaccagcctgccttgcaatcatgggggaacctgagagaggaccaaggagagaaggtt
gacaggatacaggaccatgtagaacaggctcatgggaacgtgcagtctggggtcaaggac
tcggggaagtatggaacggcccccaccccgtacagtacatttgcttacgttttctttcag
gctgcgaagtacaaggcggccatgttccccgtggcgggcgctctgattggcggggtgatc
ggcgggccgatcggactggtggccgggctgaagattggagcgggggcggctgtgggtgga
ggaatactgggttttgctggaggttccatgtggaagaaacgacaggccaaacagctggac
atcgagctggacaaaatgtccgaccgacagagccagagttatcccgacttcaagaccacg
ccgagtggtgacgtcaccaagtcagacacgggataccacaggcgaccgtccgcataa
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