KEGG   Branchiostoma floridae (Florida lancelet): 118405649
Entry
118405649         CDS       T01074                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03030  DNA replication
bfo03410  Base excision repair
bfo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    118405649
   03410 Base excision repair
    118405649
   03420 Nucleotide excision repair
    118405649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bfo03032]
    118405649
   03400 DNA repair and recombination proteins [BR:bfo03400]
    118405649
Enzymes [BR:bfo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     118405649
DNA replication proteins [BR:bfo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    118405649
DNA repair and recombination proteins [BR:bfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      118405649
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N CENP-B_dimeris Nop14 GARP DNA_pol_phi
Other DBs
NCBI-GeneID: 118405649
NCBI-ProteinID: XP_035661114
UniProt: A0A9J7KFY0
LinkDB
Position
18:complement(18317776..18374898)
AA seq 2299 aa
MVLQNSGRYVAEKDGGSSYSRGDESDKRLERSIQSTEMDSRFGFDCYKEPTECVGWLINM
HPADVLDENKRLVSAVDYYFIQDDGSRFKVSYPFKPYFYIAVRKDSEREVSSFLTKKFGG
VISKVETTPKEDLDLANHLVGLKRNYLKLSFPSVNELMKVKREIFPAVRKNKERDKANDA
YTQMLASTFGGEEERGSTSKRIADQMENIIDIREYDVPYHVRVAIDMKIHVGHWYSVRGR
GALPPEITRRDDLLDRPDPIVFAFDIETTKLPLKFPDADSDQIMMISYMIDGQGYLITNR
EIVSEDVDDFEYTPKPEYEGPFIIFNEADEIHTIQRFFEHIQEVRPNIIATFNGDLFDWP
FVEARAAFHGIDMFQEIGFQKDNQGEYKCRHIIHMDAFRWVKRDSYLPVGSQNLKATTKA
KLRYDPVELDPEEMCRMANEQPQVLANYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPD
EVLRKGSGTLCEALLMVQAFHANIVFPNKQEAVFNKLTGDGHVLDSETYVGGHVESLEAG
VFRADLPCRFRMVPEAFQQLMDKVERTMKFSIEEEEGIPVDQVTNFEEVCNDIRRKLAEL
RDTPSRLENPIIYHLDVGAMYPNIILTNRLQPSAMVDEVTCAACDFNKPGATCQRRMQWT
WRGEYMPASRNEYHRIQQQLEHEQFPPFKPGGRPRAFHELNKEEQATAEKKRLADYCKKA
YKKVHVTRVEERETTICQRENSFYVDTVRAFRDRRYEFKGLLKVWKKKVAEALKKGEAAD
IKRAKGMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCLTGARIITQARELV
EQIGRPLELDTDGIWCILPASFPENYVIHTTNTKKPKVTISYPGAMLNIQVKDDFTNHQY
QELVNPSTLQYEQRSENSIFFEVDGPYLAMVLPASKEEGKKLKKRYAVFNFDGTLAELKG
FEVKRRGELQLIKIFQSSVFESFLKGSTLDDCYASVATVADYWLDVLFSKACDMPDEELF
NLISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDKGLSCRFIISRKPEGAPVT
ERAIPLAIFQAEPSVKKHYLKKWLKSNSITDFDIRNILDWGYYIERLGNTIQKIITIPAA
LQQVKNPVPRVAHPDWLHKKLLEKNDVFKQQRISEMFAPLPKKRVQEEDTPLEDGDNSND
GRSNDIADMEDMAGPRTATNGLTVAVSNKRKRDSGEDRVGQSQEDLELTQSWREILGPPP
PLGNTKEEKLKWLDYHKRKWKLQAKQRDARKRQDKRRRLDDGETSGAVIRSRPATGLGGF
LRKTARSMMDMPWQIVQIMETAAPGQFKLWALIGSDLHGIRLNVPRIFYVNQRVPKEDSE
GGVWRKANRTLPRSNPVYNLYEYSVPEETYREHMNEITADLSAPEVEGVYETQVPLTFRA
LVRLGCIAMVNRQYARYLRDRDMDNFDLEHLEFKTVAQVGTYLPPGCMRHVFLYHNMSNQ
KAMFGVFFPMAGRAAVFVLDTVRSNQMPNLSAILQAECNARLAKGTEEDLLPLSEHQFEV
KCETDAQKIYKAIQRMLRAYKDEKRGPTLMAVQSPHSLQHLVTAMPGLDDFPLVEMHATE
PENLFGVLDWQRQVSRRMLQHYVYMETRLQHLTELAAYFHVPVGNLPQDTSLFGADLFFA
RHLQKHNHLLWCSPNERPDLGGKEADDNRLVTEFEDVTSVELNNPGCYHTVCVELEISNL
AVNTILQSQHINDMEGGAGSSISFDTIQQPFLEEMIAGQNTPGANLASYDETALCSGTFR
ILKSMVYGWLRDVTHYNNVYADYQIMQFYRWLGTPSATLYDPALRRTLHTMMKKLFLQLV
SEFKRLGSIVVFANFNKIVVCTKKRRVEDALAYVEYITNSIRSRELFHGVDITPQKCWDI
LMWLDPANHGGMKVEIPKSFLHEDDDGQNEREGQEKDGEDAEEEEEEENRDQEEEGVDLA
EEEDDDEQPVEMNWNLMYYLPEAAACQYNFSMVVAGYISNLHKHMQAEMRRAMPGNTPVR
RRGGSQSQTQVGDSSTTPSTVHYAQELVAGEMAQKLYGITQKIHKKIAGTRSRTDPAEEF
PSLPGSHLPLNNPALEFVKSICKVLSLDSNITNQVNKLRRDLLKLIGVGDFSEQAEFKDP
SLSYILPEVICKVCNYCRDIDLCKDPLLVQDGTAAPAWQCCHCGSQYDVDAIEHSLVSSL
HKKSMAFVLQDLQCLKCKGVKDLNLPIYCKCAGDFTNTIGVQQFAEKLRIFRNIARHYSM
AVLEDTVEWFVQMNPQMET
NT seq 6900 nt   +upstreamnt  +downstreamnt
atggtgctgcaaaacagcggcagatatgtcgctgagaaggatggagggtccagttattcc
aggggcgatgagtcagacaagcgactggagcgttccatccagagtacagagatggattct
cgcttcgggttcgactgttacaaggaacccacggagtgcgtgggatggctcattaacatg
catccggccgacgtcctggatgagaacaagcgactggtcagtgctgtcgactactacttc
attcaggacgacggcagcaggttcaaggtttcctaccccttcaagccatacttctacatc
gctgtgaggaaggatagtgagagggaagtgtcttccttcctgactaagaagtttggaggt
gtcatctctaaagtggagacaacaccaaaggaggatcttgatctggctaaccacttggtg
ggactgaagaggaactacctgaaactctccttcccatctgtgaacgaactcatgaaggtg
aagcgggagatttttcctgccgtcaggaagaacaaagagagagacaaggctaacgatgct
tacacacagatgctggccagcacatttggaggtgaggaggagagaggatccacatcgaag
aggatcgcagaccagatggagaacatcatcgacatccgggagtacgacgtgccgtaccac
gtccgcgtggccatcgacatgaagatacacgtgggccactggtactcggtgcgcggccga
ggtgcactgcctccagaaatcactaggagagacgacctgctggacagacccgatcctatt
gtgtttgcgtttgacattgagacgaccaaactgccgctgaagtttccggacgcagactca
gaccagatcatgatgatttcctacatgattgatggacagggctacctgatcacaaacagg
gagatagtatcagaagatgtggatgattttgagtacacgcccaagcctgagtacgagggg
cccttcatcattttcaatgaagcagatgagattcacaccatccagaggttctttgaacac
atccaggaggtacggcccaacatcatcgcaaccttcaacggagacctgttcgactggcct
tttgtagaggccagagctgcgttccacggtatagacatgtttcaggaaattggattccag
aaggacaaccaaggagagtacaagtgtaggcacatcattcacatggatgcctttagatgg
gtgaagagagacagctacctgccagtggggagtcagaacctgaaggccaccaccaaggcc
aagctgaggtacgaccctgtcgaacttgaccctgaggagatgtgtcgcatggccaacgag
cagcctcaggttctggcgaactactctgtgtcggatgctgtggccacatactacctgtac
atgaagtacgttcatcccttcatctttgctctctgcaccatcatccccatggaacctgat
gaggtgttaagaaaaggctccggcacgctatgcgaagctttactaatggtccaagccttc
cacgccaacatcgtgttccccaacaaacaagaggccgtcttcaacaagcttacgggcgac
ggccacgtgctggactcggaaacgtacgtgggaggccacgtggagtctctggaggctggg
gtcttcagggctgacctcccctgcaggttcagaatggttcctgaagccttccaacagctg
atggataaggtggaacgtaccatgaagttcagcatcgaggaggaggagggcatccctgtg
gaccaggtcaccaacttcgaggaggtgtgtaacgacatcaggcggaagctggcagaacta
cgcgacacgccctcgcgactggagaaccccatcatttaccatcttgacgtcggcgccatg
taccccaacattattttaactaataggttacagccgtcagccatggttgacgaggtgacc
tgtgcggcctgtgacttcaacaagcccggcgcgacctgccagcgcaggatgcagtggact
tggaggggagagtacatgcccgccagtcggaacgagtaccatcgcatccagcagcagttg
gaacacgagcagttcccgccgttcaaacccggcggccgtccgcgggcgttccacgagctc
aacaaggaggaacaagcgaccgcggagaagaaacgcctggcagactactgcaagaaggcc
tacaagaaggttcatgtcaccagagtggaggaacgcgagactaccatttgccaacgggag
aactccttctacgtagatacggtacgggcgttccgtgaccggagatacgagttcaaggga
ctccttaaggtgtggaagaagaaggtggcggaggcccttaagaagggagaagctgccgac
atcaagagagccaagggaatggagatcctgtacgactccttacagctggctcacaagtgt
attctcaactccttctacggatacgtcatgaggaagggtgcgcgctggtactccatggag
atggccggtatcgtgtgtctgacgggagcccggatcatcacccaggccagggaacttgtg
gagcagatcggacgcccgctggagttggacacagacggcatctggtgcatcctgcccgcc
agtttccctgagaattacgtcatccacaccaccaacaccaagaaacccaaagtcaccatc
tcctacccgggggccatgctcaacatacaggtcaaggacgacttcaccaaccatcagtac
caggagctggtcaacccttcgactctccagtatgagcagaggagtgagaactccatcttc
ttcgaagtggacgggccgtacctggccatggtgctgccagcatccaaggaagagggcaag
aagctgaagaagaggtacgccgtgtttaactttgacggcacgcttgccgaactgaaaggg
tttgaggtgaagcggcgtggcgaactgcagctgatcaagattttccagtcgtccgtgttt
gagtcgttcctgaagggatcgacgctggacgattgttacgcgtctgttgccacggtagca
gactactggctggacgtgttgttcagcaaggcctgtgacatgcctgatgaggagctgttt
aacctgatctcggagaaccgcagcatgtccagaaaactggaggattacggggagcagaag
tcaacctccatcagcacggctaagaggctggcagagttcctgggagaccagatggtgaag
gacaagggcctgagctgcaggttcatcatctccagaaaacctgagggtgctccggtcact
gagagagccatcccactggccatcttccaggccgagcccagcgtgaagaaacactacctc
aagaagtggctcaagtccaactccatcacagacttcgacatcagaaatatcctggactgg
gggtactacatcgagaggttaggaaacaccatacagaagatcatcaccatcccagcagct
ctgcaacaggtgaagaacccagtgccgagagtcgcccatcctgattggctccacaagaaa
ctgctggagaagaacgacgtcttcaagcagcagagaatcagtgagatgttcgctcccctc
cccaagaaaagggtacaggaggaggacactccgcttgaggatggtgacaacagcaacgat
ggcagaagtaacgacatagcggacatggaagacatggcgggtcccaggacagcgaccaac
ggcctgacggtcgccgtgtcgaacaagcggaaacgtgacagcggggaagatagggtcggc
caatcgcaggaggatcttgagctgacgcagtcgtggagagagatcctcgggcctccaccg
cctcttgggaacactaaggaagagaagctgaagtggctggactaccacaagagaaaatgg
aagctgcaggcgaagcagcgcgacgccaggaagcgacaggacaaacgccgtcgcctagac
gacggggagacgtcgggcgcggtcatcaggagcaggccggccaccgggctcggcgggttt
ctccgcaaaacggcgcgctccatgatggacatgccctggcagatcgtacagataatggag
acggccgcgcctggccagttcaaactctgggccctgatcggcagcgaccttcacggaatc
cggctcaacgtgccgcggattttctacgtgaaccagcgcgtgccgaaggaagatagcgag
ggtggggtgtggagaaaggccaaccgaaccctacccaggtccaaccctgtctacaacttg
tacgagtactctgtccctgaagaaacttacagggagcacatgaacgagatcacagccgac
ctgtccgcacctgaagtggagggagtctatgagacccaggtgccgctgaccttccgagct
ctagtcaggctgggttgcattgctatggtcaacaggcagtacgccagatacctgagggac
cgagacatggacaactttgaccttgagcacctggagttcaagacggttgcccaggttggg
acgtacctgccgcccgggtgcatgcggcatgtcttcctgtaccacaacatgtccaaccag
aaggccatgttcggagtgtttttccccatggcgggccgcgctgcagtgttcgtgctggac
accgtccgtagcaaccagatgcccaacctgtccgcaatactgcaagctgaatgtaacgcc
aggcttgccaagggtacagaggaggacttgcttcccctgtcagaacaccagtttgaagtg
aagtgtgaaacagatgcacagaagatctacaaggccatacagaggatgctgagagcgtac
aaggatgagaagcgtggtcccaccctgatggcggtccagtccccccacagcctgcagcac
ctggtgacagccatgcccgggctggacgactttcctctggtggagatgcatgccacagag
ccggagaatctgtttggggtgttggactggcaaagacaggtttcacgcagaatgctccag
cactatgtctacatggagacccgtctccagcacctgaccgagctggctgcgtacttccac
gtccccgtgggtaacctgccccaggacaccagcctgtttggggctgacctgttcttcgct
cgccacctgcagaagcacaaccacctgctctggtgctcgccaaacgagaggccggatctg
ggtggaaaagaggcggacgataacagacttgtgacagagtttgaagacgtgacgagtgtt
gagctgaacaaccctggctgttaccacacggtgtgtgtggagctggagatctccaacctg
gctgtcaacaccatcctacagtcccagcacatcaatgacatggagggcggtgccggctcc
agcatcagttttgacaccatccagcagcctttcctggaggagatgattgcaggacagaac
acaccaggagcgaaccttgccagctacgacgagacagcgctgtgctccggaaccttccgt
atcctgaagagtatggtgtatggctggctgcgtgacgtgactcactacaacaacgtgtac
gctgactaccagatcatgcagttctacagatggcttggaacaccgagtgcgaccttatac
gacccggccctgcggcggaccctccacacgatgatgaagaaactcttcctgcagctggtc
tccgagttcaagcgtctcggctccatcgtggtgttcgcaaacttcaacaagatcgtggtg
tgtaccaagaagaggcgcgtggaggacgcactggcctatgtggagtacatcaccaatagc
atcaggtcccgggagctgttccatggagtggacatcaccccccagaaatgctgggacatt
ctgatgtggctggatccggctaaccatggagggatgaaggtggaaatccccaagtctttc
ctacacgaggatgacgatggacagaatgagagagagggacaggagaaggatggagaagat
gctgaagaggaagaggaggaggagaacagggatcaggaagaggaaggagtggaccttgcc
gaggaggaagatgatgatgagcagcctgttgagatgaactggaacctgatgtactatctt
cccgaggctgcggcctgccagtacaactttagcatggtggtggcaggctacatctctaac
ttacacaaacacatgcaggctgagatgcggagagctatgccggggaacactcctgttagg
aggagaggaggcagccagagccagacccaggtgggcgactcctccacgacccccagtact
gtccactatgcacaggagctggtggctggggagatggcacagaaactgtacggcatcact
cagaaaatccacaagaagatagcaggaacgcggagtaggacggacccagctgaagagttc
cctagtctgccggggtcccacctcccactcaacaaccctgcactggagttcgttaagtcc
atctgcaaggtcctttctctggactccaacatcacgaaccaggtgaacaagctgcgccga
gacctcctgaagctgatcggagtgggagacttctccgagcaagccgagttcaaggatcct
tcactttcctacatccttcctgaagtcatctgcaaggtttgcaactattgccgtgacata
gacctgtgcaaggaccccctactggttcaggacggaactgcagcccctgcctggcagtgt
tgccactgtgggagccagtatgacgtagatgccatcgaacactcgctggtcagctccctc
cacaagaagtccatggcctttgtgctgcaggacttgcagtgcctgaagtgcaagggagtc
aaagacctgaaccttcccatttactgtaagtgcgcaggagacttcaccaacaccatcggg
gttcagcagttcgccgagaaactccgaatctttcggaacatcgcccggcactacagcatg
gccgtgctagaggatactgtggagtggttcgtacagatgaaccctcagatggaaacttga

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