Branchiostoma floridae (Florida lancelet): 118406102
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Entry
118406102 CDS
T01074
Name
(RefSeq) next to BRCA1 gene 1 protein-like isoform X1
KO
K17987
next to BRCA1 gene 1 protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04137
Mitophagy - animal
bfo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118406102
04137 Mitophagy - animal
118406102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118406102
03029 Mitochondrial biogenesis [BR:
bfo03029
]
118406102
Membrane trafficking [BR:
bfo04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
118406102
Pexophagy
Other pexophagy associated proteins
118406102
Aggrephagy
Cargo receptors
118406102
Xenophagy
118406102
Other autophagy associated proteins
Midbophagy
118406102
Mitochondrial biogenesis [BR:
bfo03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
118406102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
DUF1151
Motif
Other DBs
NCBI-GeneID:
118406102
NCBI-ProteinID:
XP_035661861
UniProt:
A0A9J7HR27
LinkDB
All DBs
Position
18:complement(2913247..2923273)
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AA seq
634 aa
AA seq
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MWGTITVVSPSEVSVPFLQPQEEGTISVEFQAPERPGEYQSHWRLMHHGLTFGHRVWCSI
VVDQPEILEPVLEAANMVQDMQIASPAPTNQETEQEESTMEAEVETDSQKSEDGDQSEDQ
DHADFADATQAAIAAVARLKTPPSDCSTLISAVDILTAQDLLSFEMLDVGEGREVDNVPN
NTPIDMTPRISPLPCIDEDLLFKQNSSNQPQASVVEVINEVVVDGKENASAVATSEVEQM
EEGVLVENRMAVVEVKKEPIDEETSSQSSDSTVDSDDYIVVPMPDCFNPEIPLDGSSLSS
NTDVAIQTNEPLEAMDSMDSRCSTPEIVQENGTIRIQDKFQPILPPLPAPVDQTPTANQI
QVIDLTGDDDDDDDDDDEVIQVKSEPLSNDAAAFLTEVPDPEPVSNEITPQEVTANEMPA
LEEGSGLVAERANEISDDEDDLPIGAAASDARFHETSEGTVENTEVKRPPEDVATDATEQ
NSTNADNELNNNTNARRASDRAGAHATFHADGPVVDVFPTPRGLSAAEFGGAVVNGAINV
ASNIVTALFGTNGRQNQPYIPPQHPIPPERDYTPPTPTWPPPPTSVSPMDQLFEMGFGNR
QLNQQLLDKHGNDLNRVVPELLAMMDNNWHEQRH
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtggggtaccatcacagtggtgtcgcccagcgaggtgtcggtaccattcctacagccc
caggaggaggggaccatcagtgtggagttccaggcaccagaacgaccaggggagtaccag
agccactggcgcctcatgcaccacggactcacctttggacatcgcgtctggtgctccatc
gttgtcgaccaaccagagattctggagccagtattggaggctgccaacatggtccaggat
atgcaaattgcatcaccagcaccgaccaatcaggaaacagagcaggaagagtccactatg
gaggctgaagtggaaactgatagtcagaagtcagaggatggggaccagtctgaggatcaa
gaccatgcagactttgcagatgccacccaggcggctattgcagcagtggctcggctgaag
acacccccgtcagactgtagtacactcatcagtgctgtggacatcctcacagctcaggac
ctgctgtcattcgagatgttagatgtgggggagggcagagaggtggacaatgtacccaac
aacactcctattgatatgacacccagaatttccccattgccttgcattgatgaggaccta
ctcttcaagcagaacagttccaaccaaccacaggccagcgttgtggaagtgattaacgag
gttgtcgtggacggtaaggagaatgcgagtgctgtcgccacatcagaggttgagcagatg
gaagagggagtgctggtggagaatagaatggctgtggtggaggtcaagaaagaaccaata
gatgaggagacaagcagccaatcatcggacagcacggttgactcagacgactacatcgtg
gttcccatgcccgactgcttcaaccctgagatcccattggacggttccagcctctcctcc
aacactgacgtagccatacagactaatgaaccattggaagccatggacagtatggactca
agatgctcaacaccagagattgtacaagaaaatggaaccatcagaatccaagacaagttc
cagcccatcctcccacctttaccagcacctgtcgatcaaaccccaacagccaatcagatc
caggttatagacctgacaggtgatgatgatgatgacgatgatgatgatgatgaagttatc
caggtgaagtctgagcccttgtccaatgacgctgctgctttcctgaccgaagtacccgac
ccagagccagtatccaatgaaatcacacctcaagaagtgacagccaatgaaatgccagct
ctggaagaaggcagtggattggtagctgaaagagccaatgaaataagtgatgatgaagat
gacctcccaattggtgcagcagcaagcgacgctcgctttcacgaaacatcagagggcaca
gtggagaatacagaagtgaaacgtccacccgaggatgttgctactgatgcgacagagcag
aactccacaaatgctgacaacgagctcaacaacaacaccaatgccagacgtgcttcggac
cgagccggtgcacatgccacgttccatgccgacggacccgtagtggacgtctttcccacg
cctcgcgggttgtctgcagctgagtttggaggtgcagttgtgaacggggccatcaacgtg
gcctccaacatcgttacagccttgtttggtaccaacggtcgacagaaccagccatacatc
ccccctcagcaccccatcccccctgagcgtgactacacccccccaacgcccacctggcca
ccccctcccaccagcgtatcccccatggaccaactcttcgagatgggtttcggaaatcgc
cagctgaaccaacagctgctcgacaaacatggcaacgacctaaaccgggtggtaccggaa
ctgttggccatgatggacaacaactggcacgaacagaggcactag
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