Branchiostoma floridae (Florida lancelet): 118406105
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Entry
118406105 CDS
T01074
Name
(RefSeq) complement C1q and tumor necrosis factor-related protein 9A-like
KO
K23455
collagen type VIII alpha
Organism
bfo
Branchiostoma floridae (Florida lancelet)
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Gene cluster
GFIT
Motif
Pfam:
C1q
Collagen
BclA_C
Motif
Other DBs
NCBI-GeneID:
118406105
NCBI-ProteinID:
XP_035661865
UniProt:
A0A9J7HP36
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Position
18:3124275..3133299
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AA seq
464 aa
AA seq
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MVKITSIFVGILLFVGSTLSVRILKRDAEEKAVAANLDENPGEPAKYVSVGGLSGLDADI
VVKNHPLADEPSNVIESEHTNHGVWEELEHEQDRFSSGRTASSAACSTCGCGVRGDTGPA
GPPGPPGAPGPSGIPGNHGNNGNNGLPGQSGPPGFKGDKGEIGVTGAEGQPGPTGPIGPP
GYKGEAGLIGPAGPRGPQGPIGAPGQPGANVPVPGPKGQKGDAGRDGVDSSVAGPQGPQG
DQGPRGTGGKLGPRGLPGFKGEKGAIGDPGPQGNEGPRGSPGPTTVPGIQVGVPFQQYKY
VGDRPQSDDPSAGNPDKYEEFFGNPEVELRGYSAFSAARINSMGPVDEDSKISFQHVFAN
VGENFEADSGTFTCYVPGAYFFTFHTYRATNLEVPAFIRLMLNGESQVAVYESDDDDYRD
TASNSVVLMLKEGDEVWLQLDINSYLSSSVDKHTTFTGFLLFPM
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaattacttcaattttcgtggggattttgctgtttgttgggtctacgctttct
gtcaggattttgaaaagggacgcagaagaaaaggcagttgcggcgaacctggacgaaaat
cctggagaaccggccaagtacgtgagcgttggcgggctaagtggacttgatgccgacatc
gttgtgaaaaaccacccgcttgcagacgagccttccaacgtgatcgagtcggagcatacg
aaccacggggtctgggaggagttggagcatgaacaggatagattttcttcgggaaggacg
gcgtcgtcagcggcgtgttcgacatgcggttgcggggtgagaggggacacgggccccgct
ggaccgcccggaccccccggtgcaccaggcccgtccggaataccgggcaatcacggtaac
aatggcaacaatggactacctgggcagtccggaccacctgggtttaaaggtgacaaggga
gaaatcggcgtaacgggtgcagagggccagcctggaccaaccggacccatcgggcctcct
ggatacaagggagaagctggtctgatcgggccagctgggccaagaggaccgcagggaccg
atcggtgcgccgggacaacccggggcgaacgtgcccgtacccggaccgaagggacagaag
ggagacgccggtcgggacggcgtggacagtagcgttgcaggtccacaaggcccacaagga
gaccagggaccgcgtggcaccgggggaaagctggggccacgggggttacctgggttcaag
ggcgaaaaaggcgccattggtgacccaggcccccagggcaacgaaggacccaggggatcc
ccaggccctaccaccgtccccgggatccaagtcggcgtgcctttccaacaatacaaatat
gtcggcgacagaccccaaagcgacgacccttcggcaggcaatccggacaagtacgaagag
ttcttcggcaatcccgaagttgagcttcggggatactcggcattctccgccgcgagaata
aacagcatgggcccggtagatgaagacagcaagatttcgttccaacatgtcttcgctaat
gtaggagagaacttcgaggcggactctggaacttttacatgttatgtaccaggtgcgtac
tttttcacattccacacctaccgggccaccaacctggaagtcccggccttcatccggctt
atgctgaacggtgaatcacaggtcgcagtgtatgagtccgacgacgacgactaccgagat
actgccagcaacagcgtcgtccttatgctgaaggaaggggacgaagtgtggctgcagctg
gacatcaacagctacctgtccagctcagtggacaaacacactacattcaccgggttttta
ctcttccccatgtaa
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