KEGG   Branchiostoma floridae (Florida lancelet): 118406258
Entry
118406258         CDS       T01074                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bfo03019]
    118406258
   04121 Ubiquitin system [BR:bfo04121]
    118406258
Enzymes [BR:bfo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118406258
Messenger RNA biogenesis [BR:bfo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118406258
Ubiquitin system [BR:bfo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118406258
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 zf-RING_2 KH-I_KHDC4-BBP Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_2 KH_2 zf-C3HC4 KH_DEAH11_2nd zf-RING_5 KH_PNO1_2nd zf-C3HC4_4 zf-RING_UBOX
Other DBs
NCBI-GeneID: 118406258
NCBI-ProteinID: XP_035662083
UniProt: A0A9J7KJP5
LinkDB
Position
2:21284144..21287296
AA seq 527 aa
MPSSLFPDMEPANGGAPTSMGSQDEARALQLAVDLAMLGLSVGGDQDDKMSNSGFDNDAR
NRKSSNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKED
VAMAKREIMSAAEHFSQIRAARKNNMNMGPGPNPNQPGQITIQVRVPYRVVGLVVGPKGA
TIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIDPVGDPDD
FHRNGTETPLDHFGTAATVNDHNNYIPKGTPGHTNNYHSSSNNILPRNLSEPSNFFKFPG
TNGSGTVPDFNPNNYTSSNGLAFDTFNNFTPGDDRDLGIGESPPFDPAPAPPTNMWAPLD
LVPNSRSGSSVTAALFGSNAANGTIPNVQRRSSSISGSSGHPRLSPTLSDSNEHPTARRV
RSDPLSGGPTMFTPLPGSGFSTSVSSVQSGSSTSISSSPTDSTGSLPPRSKNKKDCMICY
ESEVVAALVPCGHNLFCMECANRLCEKKDAECPVCHTTISQAIRIFS
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgccgagctcgctgttcccggacatggagcctgctaacgggggagcccccacgtcgatg
ggaagccaggatgaagcgcgggcgctgcagctggccgtggacctcgccatgcttgggctc
agcgtaggtggcgaccaagatgataagatgtccaattctggcttcgacaacgatgcgcgg
aaccgaaagagcagcaacatgaccgaatgtgtgcctgtgcctagctcggagcacgtcgcc
gagatcgtcggaaggcaaggttgcaaaatcaaggcgttgagagccaagacgaacacgtac
atcaagacgcctgttcgaggagaagagcccgtcttcgttgtgacggggcggaaagaggat
gtagccatggccaagcgggagatcatgtctgccgccgagcacttctctcagatccgagcg
gctcgtaagaacaacatgaacatgggtccagggccgaatccaaaccagccgggacagatc
actatccaagtccgcgtgccgtaccgtgttgtggggctggtggtggggccaaagggtgcc
accatcaagcgcattcagcagcagacgcacacttacatcgtgaccccgtcccgagacaaa
gaacccgtgttcgaggtgaccggcatgcctgagaatgtcgatcgcgcgcgggaggagatc
gaggcacacatcgccatgcggaccggaggcctcatcgatcctgtcggcgaccctgacgac
ttccaccgtaacggcaccgaaacgcctctcgaccacttcggcacagcagccaccgttaat
gaccacaacaactacatccccaaagggaccccaggccataccaataactatcacagcagt
agcaataacattcttcctcgcaacctctcagagccttccaacttcttcaagtttccaggc
acaaatggcagtggaactgttcctgacttcaaccccaataattacaccagcagcaatggc
ctggcctttgacaccttcaacaacttcactcctggagacgaccgagatctgggcataggt
gagtctccaccctttgaccccgcacctgcaccccctaccaacatgtgggccccgctggat
ctggtgcccaacagccgcagtggcagcagtgtgactgcagccctgttcggcagcaatgca
gccaatggcaccatccccaatgtgcaacgccgcagcagcagtattagtggttcgtcgggc
cacccccgcctgtccccaacactgtcggattccaacgagcatcccacagcacgtcgtgtt
cgcagtgaccccctgagcggtggacccaccatgttcacccctctgccaggctcaggtttc
tctacctccgtgtcaagtgtgcagtctggttcctccacctccatctcgagcagcccgacc
gactccacaggatccctcccgccgcgttccaagaacaagaaggattgcatgatctgctac
gagagcgaggtggtcgccgccttggtgccgtgtggtcacaacctgttctgtatggagtgt
gccaaccgtctgtgtgagaaaaaggatgcagagtgcccagtgtgtcataccactatatct
caggcaattcgtatattttcctaa

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