Branchiostoma floridae (Florida lancelet): 118406310
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Entry
118406310 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118406310
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118406310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118406310
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118406310
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118406310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
Macro
zf-RING_2
zf-C3HC4_2
KH_DTX3L
zf-C3HC4_3
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_6
zf-RING_5
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
118406310
NCBI-ProteinID:
XP_035662130
UniProt:
A0A9J7HPP4
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All DBs
Position
19:complement(3847199..3852940)
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AA seq
834 aa
AA seq
DB search
MGSAASKQREKENTMEGDRRAKSVSASDKKLKNKHGSQLMSPKVKEMEDIIPKGARATED
EPIRPDIDFDGPHRTYNSRSVKITNFDYGDISKLEGYFQRKYRSDFKQVKEDGLGFMIVE
FKSRQVAERVVKSVHEVDGTILEITFDSTPMTKDDVATKDKGKEQGVTAIDARAKKDGHL
YPFDEMRRVKMISQEGNLLSKEKSSNDTFKPEPHNNGHLTMSANEQSSRVMAYSMPDNVG
DEEDKMGKDPQQAKVRNGLPNISAREFRTAESVDEMTIEVDAVKVEFIKKVHRIEYDEIG
HSNNVIIEHDAESHPGMVTFRTNGPRRGNVECAYEQFMELYHRISATLSRNNAVNVLKEL
PDCTIRSLTRALTLANADDRVLVKNCLSDDFNVVFYGSETNVANAIANFIENSGKQDDAH
TSDGNPRPQSHKQTTETQVYAHVRTLDEKHFVGTVSDITISVYEGDLTQEKVDVVVNAAN
ERLYHAGGVALAISEAGGQKIQKESSEYVTKHGTLPIGQAMHTGAGKMPCKYVIHTVGPK
WKDHADKETVQSQLYEALFNVLHYAANRLKARSIAIPAISAGIYGVPVDICAVQLVLATQ
KFVQSPPANNTLRDIRFVNIDGQINSAFVRVFSGSFPSNDSGAHYYEAIGDEDCPICMDK
VVQPKRLGCCSNVFCTDCIDKAFQVKPVCPICGYQSRALKGTQPKTATMTFAKTSRVIPG
YEECGSIQIYYDIPSGIQEDCHPNPGRPYKGSMRMAFLPDNTEGQKVLQLLKKAFDRRLV
FTIGTSVTTGKTDAVIWNDIHHKTSPYGGPSNYGYPDRGYLRRVTDELAAKGIK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgggatccgccgcttcaaaacaacgggaaaaggagaacaccatggaaggcgaccgtagg
gctaagtcagtgtctgcgagcgacaagaagctcaaaaacaagcatgggagtcaacttatg
tccccgaaagtgaaggaaatggaggacattattcctaaaggggcaagagcaacagaagat
gagccaatacgccctgatattgacttcgatggaccacacaggacatataattctagatcg
gttaaaatcactaactttgattatggcgatatttccaaattggaaggatatttccagcga
aagtatcgctcagatttcaagcaggtaaaagaggatggtttgggcttcatgattgtggaa
ttcaagtctcgacaagtggctgaacgtgttgttaaaagtgttcacgaagttgatgggaca
atcctcgaaattacctttgacagtacacctatgacgaaagatgacgtagctacgaaagat
aaagggaaggaacagggcgtgacagctatcgatgctagagcaaagaaagatggccacttg
tatcctttcgatgaaatgcgccgggtcaaaatgatctcacaagaaggtaatctactttcg
aaagaaaagtcaagcaacgacacgtttaaacctgaaccacacaacaatggtcacttgaca
atgtctgccaatgaacaaagtagcagagtaatggcgtacagtatgccggacaatgtcgga
gacgaagaagacaaaatgggtaaagacccgcagcaggccaaagtaagaaatgggttgcca
aatatctccgcacgagaattcaggacagccgaatcagttgacgaaatgactattgaagta
gacgctgtaaaagttgagtttatcaagaaagtacacagaatcgagtatgatgaaattggc
cacagtaacaatgttatcattgagcatgatgctgagtcgcatccgggcatggtcaccttt
cggacgaatggaccgcgaagaggtaacgtggagtgtgcttacgagcagttcatggaactg
tatcatcgaatctcggccactctgtcaaggaataatgccgtaaatgttcttaaggagctt
ccggattgtacgattcggagcctgacccgggcgctcacccttgccaacgccgacgaccgt
gttctcgtcaaaaactgtcttagtgacgactttaatgtagttttctatggatccgaaacc
aatgtagctaatgctattgccaatttcattgaaaactcgggaaagcaagacgatgcacat
accagtgacggcaacccacgcccacagtcccacaagcagacaacggaaacacaggtttat
gcccatgttcgaacacttgacgaaaaacactttgtcggaacagtgagtgacattacgata
agcgtttatgaaggtgatctgacacaggaaaaggtagatgtcgtggtcaatgccgcaaac
gaaagactataccatgcgggcggtgtggctcttgctatcagcgaggccgggggtcagaag
attcaaaaggaatccagtgaatatgtgacgaagcacggcaccctaccaatcgggcaagct
atgcacacaggggcagggaagatgccttgtaaatacgtcatacacacagtggggccaaaa
tggaaagaccatgcagacaaagaaacagtgcagtcacaactgtatgaagcattgttcaat
gttctgcactacgcggccaacagactaaaagctcggtcaatcgccattccagccataagc
gcaggaatatacggggtaccagtcgatatctgcgccgttcaactcgtgctggcaacacag
aagttcgtccagtcaccacctgcaaacaacacgcttcgggacatcaggttcgtcaacatt
gatggccagataaacagcgccttcgttcgagtcttcagtggctccttcccatccaacgac
agtggggctcattactatgaagccataggtgacgaggactgtcccatctgtatggacaaa
gttgtacagccaaaaaggcttggttgttgtagcaatgtattctgtactgattgtattgac
aaggcgtttcaggtcaaaccagtgtgtcctatctgcggctaccagagcagagccctgaaa
ggcacccaaccaaaaactgcaacgatgacattcgcgaagacttcgcgggtcatcccagga
tacgaggagtgcggctcaatacagatttactacgatataccaagtggcattcaagaggac
tgccacccgaatccagggaggccatacaagggctcaatgaggatggctttcctacccgac
aacactgagggacaaaaagtccttcagctactgaaaaaggcctttgacagacggctagtc
ttcaccattgggacatcggtgacaaccggcaaaacggatgccgtcatttggaacgacatt
caccacaaaacgagcccctacggcgggccatctaattatggatatccagaccgaggctat
ctcagacgggtgactgacgagcttgctgcaaaaggcataaaatag
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