Branchiostoma floridae (Florida lancelet): 118406390
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Entry
118406390 CDS
T01074
Name
(RefSeq) C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118406390
Membrane trafficking [BR:
bfo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118406390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR
DUF2464
PPR_long
Motif
Other DBs
NCBI-GeneID:
118406390
NCBI-ProteinID:
XP_035662310
UniProt:
A0A9J7HPZ8
LinkDB
All DBs
Position
19:complement(2082008..2123093)
Genome browser
AA seq
1775 aa
AA seq
DB search
MEERNQRVVEYFVVAGLKETSKTLVEEIDNSHRTIAPQDPIVELAVIHRGQGETAPQGFT
CIEHTPFGFPADLNHGSLRTSPIHLCYRRGRDKPPLTDIGVLYEGKERVMAGCEIIHSTP
YGRPANVNNKAPLGGHRTYITTRRASENAAHNSLAVTDICVILTNKGETPPHAFCQIDKN
LNKGMVGSDVFLCYKKSMAKMNYISYKAGLIGRYPMEDYESFPLPEQVPIFCLPMGATIE
CWPMDAKHPLPVFSTFVLTNVDADKVYGAAVSFYESYPPEKLTEEQRKTLNYQTELDRQT
KTIHTNKCISLMSHWPFFDAFRKFLTYLYRLSVSGPHAVPLERHISHFMHDVPFPSPQRP
RILVQMGAVDSLLLMQPHHSPLPLSGASLTALLTNLGPDNAMNLLLFALLENKILLHSLR
PAVLTSVAEALQLILFPLHWPCPYIPLCPLDLADVINAPVPFIVGVDSRYFDLYEPPQDV
ICVDLDTNSIRQPGDKKLINHKILPKKPAKLLRNSLVHLCNQLIEVDIFPSIYFGVHRQT
TPDEVAVDLAPLDDGLKKQKKKLSIELAIQEAFLRFMACLLKGYRQFLLPITEKPTERAT
DASSLFDLQGFLRSRSTNQKFYTQIMKTQMFIGFIEECSFVSEKDTSLAFFDECMDKVDP
ERSDRPVEQLIDLEESFKSEHTVFVTPPEPRDLPDDRKYSYTVFPDLDHSLFLRPPNLAD
QFKQVSTSKPSSPMAATRRTKAELRHSQKVAKKNSGSPMLWAKLLLSHCFSLWFICLPAY
VKASHSKARALRTAYDMLIKMQHACRRDHLDEVCYRVVMQLCGQHSQPVLAVKVLMEMKR
NGITPNAITYGHYNKAILESRWPTGNRDGFLLWTKLRNVILAIAQFRRGIKRAVLQMSDS
SDADAVSRTSVESFPDGTASHTGAEFVNDVVKLDTHDRISMGGQSDQGYSSMTKDEVRRG
DSGVTSPLTDQDLNSTTSSQSSDLNAPQDKSRGKQDNSSENEDDTNGVDSDATVQEQPKF
EPVDYDGPEPFRPRVSSIVRNSGSMSSISTLRGSTRKDIEGHGRPKVKVKRLISLPDGVV
PIGSAAGLLITSQTSVEEPVFHERSYSLSAAFRPARSTRKRHKSAGDPSKMKRAAGGSGS
SGVERPRYPSGDSNVTLTEVLSRQGSHDSEMDGELKIDLFKGDAKLLSGLSRDDSVNQAR
QRIKGASRPASVGWFSDGSRSRSSSDASVMKHRKAAGAATRLKRSSGDSVMSRKQSEEDE
KKKKELVRKDSWENQWDPFLNEDLDKEETDETKDDAKDESEAKCNSIGRPRIRRPSLTEA
SFHPLLPLDDDMDSKQEKIAKSVPSEPKGKTDRSLSLALESDMPKLFQNFDSTGTSPTSA
NTSPPREVVRHMHKSPSCHAKLSSAGSARSPLSSKLSESPDESGLVVAVAASLPSRAPSH
NRQGSGSSFSFLKSAAASMFSPGRGTSPTSSPSMPRSMSEVTGLKDRASPSLTPVHSRQG
SGSSSKLDVFKAAASAMASKFMGSSLTSRSDNMLRAPELDSLVTFDGDDSEGERTPKRSS
RNLDYLSRSETHLVGTPPDMMSGSLPMPGMLNRRDSLDSHGSSRYASTQSIFHNYAMEVR
MSSCMRCYSCNTLLYDEEIMAGWTPDDSNLNTECQHCKSLLVPFLNVVVTDLRGGSRQFL
TPSQSIESFHSIQSAPPIHPMATVSQTSLTRTGSDLSADSLVQVGEGEVDGTAMSHSYSP
ARPHIKLKHSLSVEHPHSDSAPQPIHIPVDRRRCT
NT seq
5327 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagaaaccagcgagtggtggagtattttgtggttgccggacttaaagagacg
tccaagacgcttgtagaagaaatcgacaactcccacagaactattgcgccgcaagaccca
atcgttgaacttgccgtgatccaccgcggacagggagagacggccccgcaggggttcacg
tgtatagaacatacgccgtttggcttccccgcggacttgaaccatggaagcctgcggact
tcacccatacacctgtgttatagaagaggacgggataaaccaccgctcacagatatagga
gttctatatgaaggcaaagaacgagtcatggccggttgtgagatcatacatagcacaccc
tacggccggcctgccaatgtaaataacaaggctcccctagggggacacagaacttatatc
accaccagaagagcctcggaaaatgctgcccacaattccttagcggtcacggatatctgt
gtaatacttaccaacaagggcgagaccccgccccatgcattctgtcagatagacaagaac
cttaacaagggcatggttggctctgatgtctttctctgttacaagaagtccatggccaag
atgaactacatatcttacaaagcaggcttgatagggaggtatcccatggaagattatgag
agtttccccctgccggagcaagttcccatcttctgccttcccatgggtgccacgatagag
tgttggccaatggatgccaagcacccactccctgtgttctccacatttgtgttaaccaac
gtggatgctgataaggtttacggtgctgcggtgtcgttttacgagagctatcctccagag
aaactcacagaggaacagcgcaagacactaaactatcagactgaactagacaggcaaacc
aagaccatccacaccaacaagtgcatctccctgatgtctcattggccgttctttgatgcg
tttcgaaagtttctgacctacctgtacaggttgtctgtgtcaggtccgcacgctgtgccc
ttagagagacacatctcgcacttcatgcatgacgtcccgttcccatcgccccagcgacca
agaatactcgtacagatgggtgctgttgactccctgttgctgatgcagcctcaccattct
cccctgcccctcagtggtgcctccctgacagccctgctgaccaacctgggcccagacaat
gccatgaacctgctgttgtttgccctgttggagaacaagatcctcctgcactccctacga
cctgccgttctcaccagcgtggcagaggcactacaactgatattgttccccctccattgg
ccgtgtccatacatccccctctgtcctctggacctcgctgatgtcatcaatgctcctgta
cccttcatcgtcggtgttgactccagatactttgacttatatgagccaccccaggatgtc
atctgtgtggatctggacactaactccatcagacaacctggtgataaaaagctcattaac
cacaaaatcctcccaaagaaacctgcaaagctgctacgaaactcattagtccacttgtgc
aatcaactgatagaagttgatattttcccaagtatttactttggtgttcatcgtcaaacc
acacccgatgaagtggctgtggacttggctcccttggacgatggcctgaaaaaacagaag
aagaagctgtccatagagcttgccatccaggaagcgttcctgaggttcatggcatgcttg
ttgaaaggttaccgacagtttcttcttcccatcacggaaaagccaacagagagagcaaca
gacgctagctccctgtttgacctgcaaggctttttgagaagccgcagcaccaaccagaag
ttctacacccagattatgaagacccagatgttcattggcttcatcgaggagtgttccttt
gtgtctgagaaggacactagtctggccttcttcgatgagtgtatggacaaggtggatcct
gagaggtccgacaggccagttgaacagctcatcgatttggaagagtcttttaagagcgag
cacacagtgtttgtgactcccccggagccacgagacctccccgatgacaggaagtacagc
tacacagtgttccctgacctggaccacagcctgttcctccgtcctcccaacctggctgac
cagttcaaacaagtcagcacttccaagccaagcagtcctatggctgccaccagacgcacc
aaggcagagctcaggcattcacagaaggttgctaagaagaactcagggtcaccaatgttg
tgggcaaaactgctcctgagccactgtttcagcctgtggttcatctgtctgcctgcctac
gtcaaggcttctcactccaaggcccgtgcgcttcgcactgcctacgacatgctcatcaag
atgcagcatgcctgcaggagggaccacttggatgaggtgtgctaccgtgtggtgatgcag
ctgtgtggacagcacagccagcctgtccttgctgtcaaagtgctgatggagatgaagcgg
aacggcatcaccccaaacgccatcacctacggacactacaacaaggctattttggagagc
agatggcccactgggaacagagacggtttcctactctggacaaagcttcgcaatgtcatc
ctggccatagcgcagttccggcggggaatcaagcgggccgtactgcagatgtcggacagc
agtgatgcggatgccgtcagcagaactagcgtggagagcttccccgatgggacagcctcc
catacaggtgctgagtttgtcaacgatgtggtcaagttggacacacatgatagaataagc
atgggtggccaatcagatcaaggctacagctccatgacaaaagacgaggtacggcgagga
gacagtggcgtgacgtcccccctgacggaccaggacctaaactccaccaccagcagccag
tccagtgacttgaacgctccgcaagacaagagcagggggaagcaggataacagttcagaa
aatgaagatgatacaaacggagtggactcagatgccaccgttcaggagcagcccaagttc
gagcctgtagactatgatgggcctgaaccgttccgtccacgcgtcagcagtatcgtccgt
aactccggcagtatgagcagtataagtactctaaggggaagcacaaggaaggatattgaa
ggccatggaaggccaaaagtgaaagtgaaacgcttgatatctctgcccgatggtgttgtt
cctatcggtagtgcggcaggacttctcatcaccagtcagacctctgtggaggagcccgtc
ttccacgagcgctcgtacagcctctctgccgccttcagacctgcacgctccaccaggaag
agacacaagagcgcgggcgacccctccaagatgaagcgtgcagctggaggcagtggcagc
agcggagtggaacggccgcggtacccgagcggggacagcaatgtcaccctcacggaggtg
ctgtcccgacaggggagtcatgacagcgagatggacggagagttgaagattgacctgttc
aaaggtgacgccaaactgctgtctgggttgagtcgagacgacagtgtcaaccaggctcga
cagaggatcaaaggtgcctcacgtccggccagcgtgggatggttctcggacgggagccgc
tcccgctccagtagtgatgcctctgtcatgaaacacagaaaggctgcaggggcagccacc
aggttgaaaaggagctctggagacagtgtgatgtcaaggaagcagtcagaggaggatgaa
aagaagaagaaagagttggtcaggaaagactcatgggaaaatcagtgggacccattttta
aatgaagacctggataaagaagagactgatgaaacaaaagatgacgcaaaagacgaatct
gaagccaagtgcaatagcattggaaggcctaggataagacggcccagcctcaccgaggcc
tccttccatcctttactgccattggatgatgatatggactccaaacaggagaaaatagca
aagtcagtgccaagcgaaccgaaaggtaagactgacaggtccctaagtctggcattagag
tctgacatgccaaaactgtttcagaactttgacagcacaggtacttcgcccacatctgct
aacactagtcctcctcgagaagttgtccgacacatgcacaagtctcccagctgtcacgct
aagctcagctcggctggctctgcccgcagtccgttgagtagtaagttgtcggagagccca
gatgaatcaggactagttgtagcagtggctgcctccctcccctcaagagcaccttctcac
aatagacaaggttctggctccagcttcagcttcctgaagtctgctgctgccagcatgttc
agtcctggaaggggcacctctcctacatcttcccccagcatgcctcgctccatgagcgag
gtgaccggcttgaaggacagggcctccccctccctcacgccagtccacagccgccagggg
tcgggctccagttccaaactggacgtgttcaaagcggcggccagcgccatggccagtaaa
ttcatgggcagctcgctgacgagcaggtcggacaacatgctgagggccccagaactggac
agcctggtgaccttcgacggggatgactcggaaggagagagaactcccaagaggagctcc
aggaatctggactacttgagcaggagtgagacacatctggtcggaacacctcctgatatg
atgtcagggagccttcccatgccaggcatgctgaaccgaagggactccctggacagccac
gggtcctccagatatgccagcacccagagtatattccataactacgccatggaggtgcgc
atgagcagctgtatgaggtgctacagctgtaacaccctgctgtacgatgaggagatcatg
gcaggatggacacctgatgattccaatcttaacacagagtgccagcattgcaagtctctc
cttgtcccattccttaatgtagtggtgacagacttgagaggaggaagccggcaattccta
actcccagccagtccatagagagcttccacagtattcaatcagcccctccgatccacccc
atggcgacggtgagtcagaccagcctgaccaggacagggtcggacctgagtgcagacagc
ctggtgcaggtgggggagggggaggtagatggaacagccatgagccacagctacagtcct
gccagacctcacatcaaactgaaacactccctgtccgtggaacatcctcacagcgactct
gcgccccagcccatccacatccccgtggaccggcggcgctgcaccag
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integrated database retrieval system
