Branchiostoma floridae (Florida lancelet): 118406572
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Entry
118406572 CDS
T01074
Name
(RefSeq) DET1 homolog isoform X1
KO
K10571
de-etiolated-1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118406572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118406572
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118406572
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
118406572
NCBI-ProteinID:
XP_035662568
UniProt:
A0A9J7HSH9
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Position
2:complement(33273501..33282112)
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AA seq
578 aa
AA seq
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MADSTKAFCEGEAAWEDMEGPTNSFGSESFADFIKVRRIPNQNIVHRLRQRETHAAFPGT
NWHIARSFHQNLFPNFTIVNVEKPPCFLRKFSPDGKHFIAFSSDQTSIEIYKFRGSHAAE
NILFSREGELLSGTDASNDAAQIRACLFDTFFELMHTTSVAPNGEHLNRECSLFTEDSRY
VIVGSAMYVPEEPYPYFFDMYQNNESVAPNPRSPLEDYSLHIVDMHTGRLCDTKQFKCDK
IFLSHNQGLYLYRNILAVLSVQQQTVHIFHIGEDGYFVGVRSIGRFCYEDDELMLSHVRQ
EFNPTQQQVRPFRETAINCLKHRLLVFLYSRAKQDGSPFALRQFFQYFDQFCMLRMWKMQ
LLDENHLLIKYASEDVVTLRVQDPNSQPSFFVVYDMMSTNVVAVFENTSEELLELFENFC
DLFRNASLHSQPVHFTCSASSNIYARQIQRRFKHTIIHAKYGGQTEAVKRLLAQLPISAQ
SYSSSPYLDLSLFSYDDKWVSVMERPKACGDHPIRFYARDSGLLKFKIQAGMPGRQTPPT
ARRLVAFTFHPYEPFAISVQRTNAEYVVNFHVRHCPSD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcagattccaccaaagcgttttgtgagggggaggcagcatgggaagatatggaaggt
cccactaattccttcggcagcgaaagcttcgcagacttcatcaaagttcggcgcatacct
aaccagaacatcgtccacaggctgcggcagagagagacgcacgctgccttcccgggcacc
aactggcacatagctcgctcctttcaccaaaacctgttccccaacttcaccatcgtcaat
gtcgaaaagccgccatgttttctgcgaaagttttcaccagacgggaagcactttattgcc
ttctcctctgaccagacttcgatagagatctacaaattccgaggctcgcacgcagcagag
aacattctgttcagtcgggagggggaattgctgtctggaacagatgccagcaacgacgct
gctcagatccgggcgtgcttgtttgacaccttctttgaactcatgcacaccacaagcgtg
gcgccgaacggggagcatctgaacagagagtgcagcctcttcacggaggacagcagatac
gtcattgttggatcggccatgtatgtccccgaggaaccgtatccgtacttcttcgacatg
taccagaataacgaatcagtagcccccaacccccgatctccgctcgaggactactccctc
cacatagtggacatgcacacaggtaggctgtgcgacacaaaacagttcaagtgcgacaaa
atcttcctctcgcacaaccagggtctctacttgtacaggaacatcctcgccgtgctgtcg
gttcagcagcagaccgtccacatattccacatcggggaggacggctactttgtcggagtt
cggagcatcggaaggttctgctacgaggacgacgagttgatgctgtctcacgtcaggcag
gagttcaacccgacgcagcaacaggtccgcccgttcagggagaccgccatcaactgcctg
aagcaccggctgctggtgttcctctacagcagggcgaagcaggacgggtcccccttcgcc
ctgcggcagtttttccagtactttgaccagttctgcatgctgaggatgtggaagatgcag
ctgcttgacgagaaccatcttctcattaagtacgccagcgaggatgtggtgacgctacgc
gtccaggacccaaactcacagccttcgttcttcgtggtctacgacatgatgtcgacgaac
gttgtggcggtgtttgagaacacgtcagaagagctgttggagctgtttgagaacttctgt
gacctgttcaggaacgcctccctccactcgcagcccgtccacttcacatgctctgcctca
agcaacatctacgctcgacagatacagagaagatttaaacacaccatcatccatgctaag
tacggtggtcagacggaggcagtgaagcgcctgcttgcccagctgcccatcagtgcccag
tcctatagcagcagtccctacctcgacctctcgctcttcagctacgacgacaagtgggtg
tcggtcatggagagaccaaaggcttgcggggaccatcccatcaggttctacgccagagac
tccggtctgctgaagtttaagatccaggcggggatgccaggccgtcagaccccgcccacc
gcgcgccgcctggttgcttttacgttccacccgtacgagccgttcgccatctccgtacag
agaacaaacgctgaatatgtagttaattttcacgtcagacactgtccctcagactaa
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