Branchiostoma floridae (Florida lancelet): 118407181
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Entry
118407181 CDS
T01074
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118407181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118407181
03021 Transcription machinery [BR:
bfo03021
]
118407181
03036 Chromosome and associated proteins [BR:
bfo03036
]
118407181
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Helix-turn-helix
ARID
118407181
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118407181
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
118407181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
118407181
NCBI-ProteinID:
XP_035663496
UniProt:
A0A9J7HQ57
LinkDB
All DBs
Position
19:complement(8186074..8209514)
Genome browser
AA seq
1855 aa
AA seq
DB search
MDRSPGKDPGRERRQRQAFLKDLKDFHAAKGHPISRFPYVGGRELDLHHLYNKVTSLGGF
QKVSEKERWGELTEHFNFPRGCTHAPYALKQLYYRYLEPYERVNQGEEEEDFLLDRSPSA
SPRPGTPMGMGHHSVTRQVEIPGNIGNIFVDIELTFAAQNLLLWEEKGGFSGVGYRVPQY
ALRQTSGLSLDKPALTDYDKLMMSLQSGLPNEVDFAINVCTLLSNESKHVMRLNKAPRII
DQLLAQVGLFEDGPGSYQSVYEEGWKPLTGRDFVKFWKDTVEDGEMKDLIRTHLDKTTDE
DHMDLDSLFNTRRNLGINDIEGQRVLQVAVILRNLSFEADNVSVLAAHKTCFRFLLLCAH
SKYASLKQLGLDTLSNVAAEMILEPVQNETTQLLMHTICAGLNSRDKFSAMRGMEVLGKL
CQVPENQEVLEECVELDTYRNLVRTLLVHDVQVLLACLEVLYDLSNVGKVTASKIASIEH
SVEILVGMLTLDVQTLRPDALAGIRIIDHGPHRQAAQDPNRVDSYQQAQQTGQRQQLVTA
TVSSAHSATPSQGGREIDSETFTCSWLNSLYEVDSEGSVARIDLYADYLSSCSKLARVGI
LTSTHFYRCVKTLFPNTGSKRVDTNGQVVYHISGIKKRAVPLHINYSLLQAKAQAASPTV
QGGVQVSRSKPNPPPVGASPPPQVMTSTSSQHSSQLTRSFSIQRPSTSQSPYPNTPTPPS
HTPTPPPFQEPRPPPPPYRQPTPPQAPSPSVQTPPQVTKPNPVPAPVNPDFQRRRGSLGM
SPEEMARLIAAQGQPPGQSSGQSSAPHQGQGDANMHGPLAALLKRKGSLVSGTKEPVSTS
PAGLQQKNQAVLTGSSQPALPARPLPNMASPKGPEQVVLPHNGMPSVSQGAQTTAVRQVN
SPNLRLPPPGLALPPPHAQVVPSVRATVGVSGTVQVQTAVPVSQPNGQLNVQTVAALPMS
SPQMSIVPQTVPASVAQINQAPSTLAAASTVPPVSAAIPNLSVAQPQQLPVVSNQVTSQP
NLALATNIPGQPNVVFVQAAPNIAGQNPAMPLSQPIQQASAVYPTAIHQALLGNVQVPCS
SNVTQSPTVPAQNVSAAPLPMGIVFQTKNAGIPSTVILTQVPQQLPVGQTAPIQVSGTNL
SGSTFIVGQVNMAPGQILQPQAANDGNKSGSIIRQLLLPKPERHDSNQRLILPKPPPSAV
SQTSFSSVANVQVPPQVSPQPSSKNALPPLPVSPEPNKAVEKAANPAQQVAVPNNPDRVI
CSQVEVAKDVIGPNTGMHEDERRIEVIENHSRKTLEDKIASSGSFHQSGTAGGAPTDSIN
QSQTNNPLPVNSVDQSGTSGKEAVNQSGEGTKLPQESVDLSAEKHSGLSNGPLSTKVAQG
TNDLDVPLVNGVSDSEKEDEKMQITEEKEVRTDKKTSVVAPANSTNIPNHNSMQRNELLP
NGEIRTEETMNGSISAEKASGNVNHTHSVNGMASEDKQTCHANGNSTGIANSILSSPHNA
QNTLVHNRTSLPNSNSLPSGVAQNVVSNTNPTATNLASSPDELHSKKAQKRPLENDVLAR
GIANKVGMRIVTDQRLKAEVSQNSTVNVQGNSPSLSVNVVKAGENSAFVPGSAISGPSQS
LRLSAPGGASSQGAPPGSPQGTAEGGVAQNSAAGEQRRKSGNFICLWYNCESWYDTPNQV
FVHAVREHVLASNIGQCLWEGCEPIKRQPWSLISHLQDKHCSKEALQVALQVFQQRQSSG
ARAPTPQGPPREIQCPPNAAFLAIRRMTPYQTPQKDWEEKEGPITKSVRLTATLILRNVA
KHSVEGRRKIQRYEEHLSYLALSNLESANFIAKCLGFVFQPEQSESQRDNPPYVR
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggaccgttcgcccgggaaagacccgggtagagaacgcaggcagaggcaggcgtttctg
aaggatctgaaggattttcacgctgccaaagggcacccaatttctcggtttccctacgtt
ggcgggagagagctggacctgcaccatctttacaacaaagtcacctctttgggaggattt
cagaaggtgtctgagaaggagagatggggggaactgacagaacatttcaacttccccaga
ggttgcacccatgcaccttatgcactgaaacagctgtattacaggtacctggagccgtac
gagcgtgtgaaccagggggaagaggaggaagacttcctgttggaccgcagcccctccgcc
tctccccgccccggtacacccatggggatggggcaccacagtgtgaccagacaggtggag
ataccaggtaacatcggcaacatttttgtggacatagagcttacctttgcagcacagaac
ctacttttgtgggaggagaaaggaggttttagtggtgttgggtatcgggtaccacagtat
gccctccgtcaaaccagcgggttatcgctggacaagcccgccctcacggactacgacaag
ctgatgatgtcattacaaagcgggctgccgaacgaggtggacttcgccatcaacgtgtgt
accctgctgtccaacgagagcaaacacgtgatgcgcctgaacaaggcgccgcggatcatc
gaccagctgctggcgcaagtcggcctgttcgaggatggtcctgggagctaccaatcagtg
tatgaagaggggtggaagcccctaactgggagggactttgtgaagttttggaaagacaca
gtggaagacggagaaatgaaagatcttattaggacgcacctggacaaaactacagatgag
gaccacatggatttggacagcctgttcaacaccaggaggaacttgggcatcaatgatatt
gaaggacagagagtcttacaggttgctgtcatcctaagaaacctgtcgtttgaggctgac
aatgtctcagtactggcggcacacaaaacctgtttcaggttcctgctcctgtgcgcgcac
agcaagtacgcgtctctgaagcagcttggtctggacacactgagtaacgtggcagctgag
atgattctggagccggtacagaacgagaccacacagctgctcatgcacaccatctgtgct
gggctcaactccagggacaagttctccgccatgagaggtatggaagttctcggtaagctg
tgtcaggttccagagaaccaggaggtactagaggagtgtgtagagctggacacgtacagg
aacctggtgcgcacactgctggtacacgatgtacaggtcctgctggcctgtctggaagtg
ttgtacgacctttccaacgtcggcaaggtcacggccagcaagattgcatccatcgagcac
agcgtggagatcctggttggcatgttgacgttggatgtgcagaccctgcgtcctgacgct
ttagcgggcatcagaataatagaccatgggccacaccggcaagccgcgcaggaccccaac
agggtggacagctatcaacaggcccaacaaacaggtcagcggcagcagttagttaccgcc
acggtatcatcagctcactctgcgacgccgtctcagggcgggcgcgagatcgacagcgaa
accttcacgtgttcgtggctgaactcgctgtacgaagtggactcggaggggtcggtagcg
aggatagacctgtacgcagactacctgtcgtcctgcagtaaactggcgcgagtcggcatc
ctcacatccacacacttctacagatgtgtcaaaacattgtttcccaacacggggtccaag
agagtggacaccaacgggcaggtggtgtaccacatcagtggcatcaagaagagagctgtc
cccctccacatcaactacagcttactgcaggccaaggctcaggctgccagtcctacagta
caggggggagtccaagtgtccaggtccaaaccgaacccccctcctgtcggggctagcccc
cctccacaggtgatgacatctaccagcagtcaacactcatcacagctcacacgttccttc
agcatccagcgcccttccacctcccagtccccgtaccccaacacccccacccctccctct
cacacccccacccctccccccttccaggagcccagaccccctccccctccctacagacag
cccaccccaccccaagccccctccccatcagtacaaaccccgccccaggtgaccaaaccc
aaccccgtccccgcgccggtgaacccagacttccagaggaggcgaggttcacttggaatg
tcaccggaagaaatggccaggctgatcgccgcccagggtcagcctccaggtcagagttca
ggtcagagttcagctccacaccaggggcaaggggatgccaatatgcatggtcctctggcg
gccttgctgaaacgtaagggtagtcttgtgtcggggaccaaggagcctgtctcaacatca
ccagctgggctgcagcagaaaaatcaggcagtgttaacaggttcctcacagccagccttg
ccagcaaggcccttgcctaatatggcaagcccaaaaggccctgaacaagttgttcttccc
cacaatggaatgccgtcagtgtcgcaaggggctcaaactacagcagtaaggcaggtcaat
tcacccaatctgaggctaccccctccaggcctggccttgccacccccacatgcccaagtg
gtaccttccgtgagagcaactgttggtgtgagtgggactgtccaggtacagaccgcagtg
ccagtttcacagccaaacgggcagctaaacgtgcagacagtcgcagcattgcccatgtct
agtccacagatgtccatcgtgccgcaaacggtgcctgcttctgttgcacaaattaaccag
gcaccttctactctggccgccgcctcaacagttcccccagtcagtgccgccatccctaac
ctctctgttgcacaacctcagcagcttcccgtcgtcagcaaccaagtcacctcgcagccc
aacctggcgctggcaactaacatccccggacaaccaaatgtcgtgtttgtccaagctgct
cccaacattgccgggcaaaaccctgccatgccgctgtcccaacccatccagcaagcgtcg
gcggtgtacccgaccgccatccaccaggcgttgctaggcaacgtgcaggtcccgtgctcg
tcaaacgtgacgcagtctccgacagtcccagcgcaaaatgtctcggcggctcccttgccc
atggggatcgtctttcaaaccaagaacgcggggattccgagtacggtcatcctaacgcaa
gttccgcaacagctgcctgtgggacagaccgctccaatccaggtatcaggaacgaacctt
agcggcagcacattcatcgttggacaggttaacatggcgccgggacaaatcctccagcca
caagcggcaaacgacggtaataagagcggaagtatcatcaggcagctgttgttacccaaa
cccgagcgtcatgactccaaccagagattgatacttcccaaacctcctccctcagccgtc
agccaaacatccttcagtagtgtagctaatgtacaggttcctccgcaagtaagcccccag
ccgagcagcaagaatgccctgcccccactgccagtgagtcccgagcctaacaaggctgtc
gaaaaagctgcaaatcccgcacagcaagttgcagttcccaacaatcctgaccgcgtcatt
tgttcgcaagttgaggtcgcaaaggacgtgattggaccaaacacagggatgcacgaggac
gagagaaggattgaggtaatcgaaaatcatagtagaaaaactcttgaagacaagattgcc
agtagtggtagtttccaccaatcagggactgcgggtggggcaccaactgatagtatcaac
caatcacaaaccaataacccattgccagtgaactcagtggaccaatcagggaccagtggt
aaggaagctgtgaaccaatcaggggaaggcacaaaactacctcaggaatcagtggacttg
tcagcagaaaagcattctgggctttctaacgggccgttgtcgaccaaggtggctcaaggt
accaatgacttggacgttcctcttgtgaatggagtcagcgattctgaaaaagaagatgag
aaaatgcagataacagaggaaaaggaagtgagaacagacaaaaagacttctgtcgtagca
ccggcaaattccacaaacattcccaaccataattccatgcaaagaaacgagttgttgccc
aatggggagataaggacggaagaaacaatgaacggctcaatatccgctgaaaaagcttca
ggaaacgtaaatcacacacactccgtgaacggaatggcttctgaggacaaacaaacatgc
cacgccaacggaaattccacaggaatcgcaaattccatcttgtcttctccgcacaatgct
cagaacactttagtacacaataggacttcactgccaaactcaaattcgttaccctctggc
gttgcgcaaaacgttgtctcaaacaccaacccaaccgctacaaaccttgcatcatccccg
gatgagttgcatagcaagaaagcgcagaagcggccgctcgagaacgacgtgctagcacga
ggaatcgcgaacaaagtcgggatgagaatagtgaccgaccagagactgaaagcggaggtt
tctcaaaacagtactgttaacgtacaaggtaattctccgtcactttctgtaaatgttgtg
aaagccggggagaactctgcttttgttcctgggagtgcgatatcaggtccatcccagtcg
ctgaggctttcggctcctggtggtgcttcttcgcaaggtgcgccccctggcagcccccag
ggaactgcagagggtggcgtggctcagaacagtgctgctggggaacagaggaggaaaagt
gggaacttcatctgcctttggtacaactgtgagagctggtatgacaccccaaaccaggtg
tttgtccacgctgtccgagagcatgtgttggcgtccaacataggccagtgtttgtgggag
ggctgtgaaccaatcaaacggcagccctggtcactcatcagtcacttacaggacaagcat
tgttccaaggaggctctccaggtggctcttcaggtgttccagcagcgacagtcgtcaggt
gctcgtgcccccaccccccaggggcctccccgggagatccagtgtccgcccaacgctgcg
ttcttggctatcaggaggatgactccctaccagaccccacagaaggactgggaggagaag
gaaggccccatcaccaagagtgttcggctgacagccacattgatactgaggaatgtagcc
aagcactctgtggaagggaggaggaaaatccagcgctatgaagagcatctgtcgtacctg
gcactcagcaacctggagtccgccaactttatcgccaagtgcctcggcttcgtgttccaa
ccagagcagtcggagtcccagagagacaatcccccttacgtccgatag
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