Branchiostoma floridae (Florida lancelet): 118407309
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Entry
118407309 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase arih1-like isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118407309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118407309
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
118407309
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
118407309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_ARI1
IBR
IBR_1
IBR_2
Ariadne
zf-C3HC4
zf-C3HC4_2
zf-RING_14
zf-C3HC4_4
UBA_ARIH2_N
Rcat_RNF216
TRAF3_RING
zf-RING_UBOX
zf-RING_2
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
118407309
NCBI-ProteinID:
XP_035663666
UniProt:
A0A9J7KB22
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All DBs
Position
2:complement(31787965..31813776)
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AA seq
531 aa
AA seq
DB search
MDSEDEYVMDDVDDEEEDDLADEDYENFDLGMEPEPLSSAAQGSSRDDELDDFPYEVLSP
ELIVQHMVDCIKDVNTVVQIPPTATRILLNHFKWDKEKLMERYFDGNQEKLFSEAHIISP
HRKAKSRPKNPGHGSNSQLGAMNTRSSTALANQELLCEICLITMPQSYMTGLECGHRFCI
SCWNEYLTTKIMDEGMGQTISCAAHGCDILVDDATVMRLIQDSKVKLKYQHLITNSFVEC
HRLMKWCPAPDCKYAVRVQYVDAKPVSCACGHSFCFSCSENWHDPVKCSWLKKWKKKCDD
DSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKADFCWVCLGPWEPHGSSWYNC
NRYDEEEAKAARDAQEVSKSRAALQRYLFYYNRYANHQQSLKFEHKLYAQVKLKMEEMQQ
HNMSWIEVQFLKKAVDVLCQCRTVLMYTYVFAFYLKKNNQSIMFEDNQKDLENATECLSE
YLERDISADSLVDIKQKVQDKYRYCESRVNVLLQHVHEGYEKDFWEYNEVL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggattcggaggacgagtatgtcatggacgatgtagacgacgaagaagaggatgacctt
gcagacgaagactatgagaattttgacttgggaatggaacccgagcccttatcatcagcg
gctcagggttccagcagggacgacgaactggacgattttccgtacgaagtcctgagtcca
gaactgattgttcaacacatggtagactgcatcaaagacgtgaacactgttgtgcagatt
cctccaacagccacccgtattctgctgaatcactttaagtgggacaaggaaaaactcatg
gaaagatacttcgatgggaaccaggaaaagctgtttagtgaggcccacatcatcagcccc
cataggaaagccaagtccagacccaagaatcccggtcatggctcaaacagccagctcggc
gctatgaacacgagatcgtcgacagccctggccaatcaggagctgctgtgcgagatctgc
ctgatcaccatgccgcagtcctacatgacggggctggagtgcggacaccgcttctgcatc
tcctgctggaacgaatacctcaccaccaaaatcatggacgagggcatgggacagacgata
tcgtgtgcagctcacggttgtgacattctagtagatgatgccacagttatgaggcttata
caagattccaaagtgaaattgaagtaccagcacttgataactaatagttttgtggagtgc
cacagattaatgaagtggtgccctgccccagactgtaaatatgcagtcagggtgcagtac
gtggatgcaaaacctgtatcgtgtgcctgtggacacagtttctgtttcagttgctctgaa
aactggcacgatccagtcaagtgttcatggctgaagaagtggaagaagaagtgtgatgat
gactcggagacgtcaaattggatagcagccaacaccaaggagtgtcccaagtgtcacgtg
accatcgagaaagacggagggtgtaaccacatggtgtgtcggaaccagaactgcaaggct
gacttctgctgggtctgcctcgggccatgggagcctcacggatcgtcatggtacaactgt
aaccgttatgacgaggaagaggccaaggctgcccgcgatgctcaggaggtaagtaaatcg
agggcggcgctgcagcggtacctgttttattacaaccgctacgccaaccatcaacagagc
ctcaagtttgagcacaagctgtacgcccaggtcaagctgaagatggaggagatgcagcag
cacaacatgtcttggatcgaggtgcagttccttaagaaggccgtggacgtcttgtgccag
tgccgcacggtcctgatgtacacctacgtcttcgctttctacctgaagaagaacaaccag
tccatcatgtttgaggacaatcagaaagacttggagaatgcgacggagtgtctgtcggag
tatctggagagagacatctccgccgacagtctagtggacatcaagcagaaggttcaggat
aagtataggtactgtgagagtcgggtgaacgtcttgctgcagcatgtgcacgagggttac
gagaaggacttctgggagtacaacgaggttttgtag
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