Branchiostoma floridae (Florida lancelet): 118407912
Help
Entry
118407912 CDS
T01074
Name
(RefSeq) proline and serine-rich protein 1-like isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118407912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118407912
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118407912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
Motif
Other DBs
NCBI-GeneID:
118407912
NCBI-ProteinID:
XP_035664382
UniProt:
A0A9J7HVS9
LinkDB
All DBs
Position
2:12481997..12499051
Genome browser
AA seq
792 aa
AA seq
DB search
MSRHRNIRSMNVHDEYEGYDDVYGHSVEDDYGVSPATEAQFMYRRSEAPRLSSFIEESKK
ESIEEEEEYDYDDHEDHDHSLSDSQTFQWPRLSDQNEARLRSCLEEIQNVIGDSVPQHVL
VDTVMRCDYDLEKALDAVLSIQDKPKEARPMPTAAAPPRTQEHTSVDLASPSGLLRLGHT
TVVEVPTSKSLCSTAMPPSDIPPLRQSTLSNLFPPTSKLPTMGDNLLKNKNTGSSPLMSL
SQLAGVHLGSAETAKNMSPVESSGVGHSLGKLNLNVSSSKPLSHKIGSKNVSVDTVGHSQ
ESNSSTMSLSELANLHLSGDEKMSTSPFGSTTGTLGGKIILTQGGSIESSDIPSLGAQSS
LGQVHQTSAKTMTDTNTISSLSSLSSFAVSDKDTASDDRSLKIAAHGTSGFSTTDRSQHG
ISVGKTESSGVLSSSPGLLSTPLSQLSSSPLGLGVGLLSRSTCGSQSNSLPTGASPPHPV
SNISHLSGSPQSTLSSLSGVSQLSGSNQARNSSLFGMGQNAGPVKLGGGLSSSQAQSGLP
LTMLGSTSSGKLGTVSLSDYQLLGQGFSGGSLDDLGPLGSQTSKTNVVDKKTTSSNEGIG
SLNKSGLGSRKDTSIEGNRKGSAALQLPLSSLCSTAGDPSLTSGLLGSTGGMHIDLSAAL
RKDEPRPLHLSSKTQAKTSSKILPAAQHMSKKVQEFEDRPLSPSFWEQNIFLPKEAISRP
SPFAQALCCKECRYIRAGNHPRFTYHHQRKGQRSVSPVQVAQIVPFDFSTPSPDDVVKKK
QKAAFTRPNGVG
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtcacagaaacatccgatctatgaacgtccacgatgaatatgaagggtatgat
gatgtgtatggtcactcggtagaggacgattatggggtttctccagcaacagaggcccag
ttcatgtaccggaggagtgaagcccctcgcctctcttccttcattgaggagtcaaagaaa
gagtctatagaagaggaggaagagtatgactacgatgatcatgaagaccatgatcactcc
ctgtctgactcgcaaaccttccaatggcctcgcctcagtgatcagaacgaagcacggtta
cgatcatgtctggaagagatccaaaacgtgattggtgacagcgtacctcagcatgttcta
gtggacacagtcatgaggtgtgactatgacctggagaaggcactggatgctgtgctgtcc
atacaggacaaaccgaaggaagccagaccaatgcccacagctgctgcacctcctaggaca
caagaacacacatctgttgacttggctagcccttctgggttgttaagactgggacacaca
actgttgtagaagtcccaacctcaaaatcactgtgcagtacagcaatgccacctagtgat
atacctccattacggcagtccactttgtcaaatctctttcctcctacatccaaacttcct
actatgggagacaatcttttaaagaacaaaaatacaggcagtagtccactaatgagctta
tcacagcttgctggtgtacatctgggcagtgctgagactgcaaaaaacatgtcaccagtg
gagtcatcaggtgttggccattctcttggcaagcttaatctgaatgtttcttcttccaaa
cctctatcacacaagataggaagtaaaaatgttagtgtagatacagttggacatagtcaa
gaaagtaacagttctacaatgagcttgtcagaacttgccaacctacatctaagtggtgat
gagaaaatgagtacttctccattcgggtccactacaggaactcttggtgggaaaattatt
cttactcagggaggaagcatagaaagtagtgacattccctctttgggggctcagagtagt
ctcggtcaagtgcaccaaacatctgcaaagacaatgactgacacaaacaccataagtagt
ctaagttcactgtcatctttcgcagtgagtgacaaagacactgcctccgatgacagaagc
ttgaaaatagctgcacatggcacatcaggtttttctaccacagacagaagccaacatggg
atttcagttggtaagacagagtcctcaggagttctctcaagttcaccaggccttctttca
accccgttgtcacagctaagtagcagccccctaggattgggtgtggggttattgtcaagg
agcacctgtgggtctcagagcaattccttaccaacaggagctagcccaccacatcctgtt
tcaaatatttcccacttaagtggcagccctcagagcactttgtccagtttgtctggtgtc
agtcaactgtcgggttcaaaccaagcaagaaactcatcattgtttgggatgggacaaaat
gcaggtcctgtgaaacttggtggtgggttgtcttcatctcaagcacaaagtggtttgccg
ttgacaatgctgggcagtactagtagtggtaagctaggtacagtgagtctgtccgactat
caactgttaggtcagggcttcagtggcggtagtttggatgatcttggtcctttgggatca
cagactagtaagacaaatgttgtagataagaaaaccaccagcagtaatgaagggattgga
agcctcaacaagtctgggcttgggagtagaaaagataccagcattgaaggtaacaggaaa
gggtcagctgctttgcagctccccctgtcatccctgtgcagtactgcaggtgatccttca
ttgacaagtggtctattaggctcaacaggtggcatgcacattgacctcagcgcagctctt
agaaaggatgaaccaaggcctttacatctctctagtaagactcaggctaaaacaagcagt
aaaattttacctgctgcacaacatatgtccaaaaaagttcaggagtttgaagacagacca
ctcagtccatctttttgggaacaaaacatttttcttccaaaagaagccatttctcgaccc
tctccattcgcacaggcactctgttgtaaggaatgtcgttacatacgggcaggaaaccac
cccaggtttacctatcatcatcaacgtaaaggtcagaggtcagtttcaccagtacaggtt
gcccagattgttccctttgacttttccacgccctccccagatgacgtggtgaagaaaaaa
cagaaggcagctttcacacggccaaatggcgtgggataa
DBGET
integrated database retrieval system
