Branchiostoma floridae (Florida lancelet): 118407973
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Entry
118407973 CDS
T01074
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04145
Phagosome
bfo04512
ECM-receptor interaction
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118407973
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118407973
09142 Cell motility
04820 Cytoskeleton in muscle cells
118407973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118407973
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118407973
00536 Glycosaminoglycan binding proteins [BR:
bfo00536
]
118407973
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Phagocytosis
Opsonins
118407973
Exosome [BR:
bfo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118407973
Exosomal proteins of colorectal cancer cells
118407973
Exosomal proteins of bladder cancer cells
118407973
Glycosaminoglycan binding proteins [BR:
bfo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118407973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
Ephrin_rec_like
NCD3G
Motif
Other DBs
NCBI-GeneID:
118407973
NCBI-ProteinID:
XP_035664470
UniProt:
A0A9J7HU68
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MITYYLEPCSEDYDPPLDGGKACSVTDDATSAMFCTVFCHEDKEFAVAPAQAYTCRADGG
WFADSTLVEGSYRPGRPHAVGAVHYFSGTDCSSSTAEISSNFQQLFSQLQSAQPGGTISI
GLQDIEVECGGTTRHIASRRGPYFISKSKRSANGFTVRFTVVAISSLAPENITQNEQYDL
IYALDDVYFEIDDKVASQQFDMIINGQQATVDTFDMGFAEFDLNCTEGQLSFQDSFEAYC
LDCPPGTFHDLTTDTCEYCPVGEYQNQPVQTACKPCPVNTWSVFPGAKEEAQCVSVCLGK
DDLCSSCVHVKGQLTCKCEVGWAGSQDGLTCGLDSDQDGYPDVSLPCNGTRCKKDNCPGI
PNSGQDDADGDEIGNACDDDMDNDGFLNVDDDNDDANVLDNCPLTVNVNQTDSDGDGVGD
VCDNCPMNINTDQRDTDGDDVGDVCDSDADSDGIIDNQDNCPFVTNAQQEDSDGDGVGDV
CDNCPTVANVDQFDLNQDSIGDSCTDNADSDADGVPNSLDNCPDIPNSQQLDTDKDGAGD
LCDDDDDGDTILDDVDNCRLVPNPDNTDFDGDGVGDACTDDYDMDGVPDVDDVCPESEVI
ARTDFRNYQTVNLAGSSGSDPPVWEFLNEGAEIVQNVNSDPGLVLGPDYFGNLDYSGTFF
VNTQRDDDFVGFVFSYQRNSRFYLVSWKQQGDIDGGQAGVQLKLVNSTTGPGRDLKLALW
NGLEVTGQTKLLWEDPKKVVWRYSTAYRWELKHRVDIGLIRFHLYEGSHLVVDSGDIQDA
SLRGGRLGVYCYSQEKVIWSDLVTKCDDTSPPNVTSA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttactacctagaaccctgcagcgaagattacgaccctcccctagacggtggc
aaagcctgctcagtgacggatgacgcaacatcagccatgttctgtactgtcttctgtcat
gaagacaaggaattcgctgtagcacctgcccaggcgtacacgtgcagggccgatgggggc
tggtttgctgactctactcttgtggaagggagttaccgtccaggacgcccccacgcggta
ggagcggttcactacttctctggcactgactgttccagcagcacagctgaaatcagctcc
aacttccaacagctcttcagccagctgcaatccgcacagccaggtggaacaatctcaatt
gggctgcaggacattgaagtcgagtgtggggggacaaccagacatatagcttcaagaaga
gggccctacttcatctcaaaatccaaaagatctgcaaatggcttcacagtaaggttcacg
gttgttgcgatcagctcgcttgcgccagaaaatattacccaaaatgaacaatatgacctc
atttatgccctcgacgacgtctactttgaaatcgacgacaaggttgcaagccagcagttt
gacatgatcatcaacggacaacaagccaccgtggacacatttgacatggggttcgctgag
tttgacctcaactgcaccgagggacaactgagttttcaagacagcttcgaggcgtattgt
cttgactgtccacccggcacgttccatgacctgacgacggacacgtgtgagtactgccct
gttggtgagtaccagaaccagccggtacagaccgcctgcaaaccctgtcctgtcaacacc
tggtccgtgtttcctggagcaaaggaggaggcccaatgtgtgtcagtctgcctgggcaag
gacgatctgtgctccagttgcgtccacgtaaagggacagctgacttgcaagtgtgaagtt
ggctgggcgggctcccaggacggacttacctgtggacttgacagtgaccaagacggctat
ccagacgtgtccctaccttgcaatggcacgaggtgtaagaaggacaactgcccgggaatc
cctaacagcggtcaggacgatgcagacggggatgagattggaaacgcctgcgatgacgac
atggacaacgatggattcctcaatgttgatgatgataatgatgatgctaatgttctggac
aactgcccactgactgtgaacgtgaaccagactgacagtgacggagatggagtaggtgac
gtgtgtgacaactgtcccatgaacatcaacactgaccaacgggacactgatggggacgat
gtgggcgatgtgtgcgacagtgatgccgatagtgacgggattattgacaaccaagacaac
tgtccattcgtgaccaatgcccaacaggaagattcagacggagacggggtcggagatgtt
tgtgacaactgtccaactgtcgcaaatgtggatcagtttgatctgaatcaggattctatc
ggtgattcttgcacagacaatgctgacagcgatgctgatggggttccaaactccttggac
aactgccctgacatccccaacagtcagcaacttgataccgacaaggacggagcaggggac
ctttgtgacgatgacgacgatggggacacaatattggatgatgttgacaactgtcgcctc
gttcccaacccggacaatacagatttcgacggagatggcgtaggtgatgcctgtacagat
gactatgacatggacggcgtgcctgacgttgatgacgtgtgtcctgagagtgaggtcatc
gcccgcacggacttcaggaactaccaaaccgtgaacctggccggaagttccggcagtgac
cctccggtctgggagttccttaatgagggagccgaaatagttcagaatgtgaacagtgac
ccaggcctcgtgctcggtccggactacttcggcaacttggactacagtggaactttcttc
gtcaacacccagagagatgacgactttgtggggttcgtcttcagctaccagagaaactcc
cgcttctaccttgtgtcctggaaacaacaaggggacatcgacggaggacaggcgggggtg
cagctgaagttggtgaactctacaacaggaccgggtagggacttgaaactggctctctgg
aatggtttggaggtgacgggtcagaccaagctgctgtgggaggatcctaagaaagtagtg
tggcgctacagcaccgcctaccgctgggagctgaagcaccgagtggacatcggactcatc
aggttccacctgtacgaaggtagccaccttgtggtggactcaggtgacattcaggacgcg
tctctccgcggaggccgcctcggggtgtactgctactcccaggagaaagtcatctggtcc
gatcttgtcaccaagtgcgatgacacctctcctcctaacgtgacatctgcctga
DBGET
integrated database retrieval system
