Branchiostoma floridae (Florida lancelet): 118408292
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Entry
118408292 CDS
T01074
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
bfo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118408292
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118408292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118408292
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118408292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
118408292
NCBI-ProteinID:
XP_035664875
UniProt:
A0A9J7HUX4
LinkDB
All DBs
Position
2:complement(24436955..24449658)
Genome browser
AA seq
1524 aa
AA seq
DB search
MATSGAGKARSRRSHAPKPYARSGGRKSILSSVTEYLTPSWLKGMWRQDESGAQPTTLTE
RPNTRGKPAHVPVVHVREDQNGLDEEEEEEETEVPPVRVTKNRLTHHQDPSVQGSDDARH
GPGYFSQIPLTRGSIHAQRPQSLPATSSYTTTYTREAPSNPGLHAAEEDKFSEDSASTSV
SFSNVPQVDQSERRSETTTEEVVRDIARPKSLWSEERETRMSVPQQPARSARRPAFNYSV
FGSPALNDSSSLFGSPITESPFYEGRTTYGGASAQKHGQKRGRTVSPLQVAPHTMRQQVR
PKPASSSRGSGVMSVTAQRILHTLERMSTPISDAKRIPSLTLSTDESPLGFTPSTKKRRV
MGGSFLEPGTSRLEGRLAGQPPVQRLNLSTPASIATNRAQTHSTYRPRKSAVLAKEEILV
PDSEPATSVARDREPSPLKVISKPASKPAESRPAPVTKPSSQAASTWTPPAQLPIGSGGK
IRRERSYGTQRAHAVQDEEEVEVPVLPEIALPIASLPKFDFSPAPSKPLSEGSKVSTTPQ
VSSVTSSPQFTFASPIVMSSPEDSTPAVSNTETPKFQFSQPASPGKSFPSQGLGTSSAVS
AGSSTFLTTGAGSGFQPKRKAPEPVVSPSAAASPPPLKQGSVLDALKAEPLPLKSGSVLD
ALKGGPLVSKPETTKEKLEERKTTGEGSAAANTKTASLPSLGDQFKKPSGGWDCDTCMVQ
NTAAASRCVACDTPKPGSQPKLTVPTTVPPVSFGTDAAPKTNGFKLGTTAEGGSANSGFK
FGSGSAVNSTSSGFTFGSSSASTAASEQDSNTLGGLKKGTTDFVSTNANTQDASKSIWSK
AASGNKWTCDTCLVENKNESTKCAACESPKPGSESKTAASTPAVNFGTSSAFKSTSSSSG
SLLAAANNGQKWECQTCLVYNTDDKTKCAACETPKPGSQNKSTPAVGASGSGGFSLGTNS
SGLAAAISAQQSKWECETCMVQNDKDATKCLACETPKPGSAQSSSGTGGFQFGSQSTSTG
KTASFGSSTGGFQFGAPKPASTETATDSKPTFSGFKFGSGGAESAPSTATSGGLQFGAGT
TAASTTPSGGLSFGAGTTTASTGGFTFGAASSASGAATTTSNATSSASGGFTFGTGTTSG
AAASVPAATGGFTFGTGSSAAGAAASAGFKFGAGTASQQPDAAPKMTSIADLAKAGQLSV
PKPAAGQSTAKRSLESDNSTPAKVNLSSAFGSGTPFGSANPSTAPSFGSTTGANPPVFGA
GTSAAPSSGLTFGAPAAAASATGSAAATTSGFTFGTGSSSTAASTTPAPFSFGAGAPPAA
TTAATASAPFVFGGGASSAPGGSTGGFNFSGGQTAPPATTTAPSFGTPAFGANPTPAAST
PFAPATTAVSGGATPFGGATSFGVQTTSAPSSGPVFGASAAQPAPTAGFNFNAPSQPTFQ
FGAGSQQSPAVFNFGAAAPAAAAPGGGFNFAAGAGTAAPAPQPAAPFNFSAGAQPGGNPF
SIQSTPSASPGGRRVIKKAQRRKR
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccggtgctgggaaggctcgtagccggcggtcacacgcgccgaagccatac
gcaagatccggcgggagaaagtccatattaagcagtgtgacggagtacctgacgccatca
tggctgaaaggtatgtggagacaggatgagagtggtgcacagcccaccacactgacagag
aggccgaacacaagaggaaaacctgcccatgttcctgtggtgcatgtgcgggaagatcag
aatggactggacgaagaggaggaggaggaagagacagaggtacctccagttcgtgtcaca
aaaaatagactgacgcatcaccaggatccatctgtacaaggttctgatgatgctcgtcac
gggcctggatacttcagtcagatcccactgacacgggggtcaatccatgcacagaggcca
cagtctttaccagctacttcatcctacaccacaacatacacacgggaggcaccatctaat
ccaggcttacacgctgctgaggaagataagttctcagaagactctgcctccaccagtgtc
agcttctccaacgtcccacaagtggaccagagtgagagaaggagtgaaacaacaacagaa
gaggttgttagagacatagccagaccaaagtctctgtggtcagaagaacgtgagaccaga
atgtcagtgccccaacaacctgcacgatctgccaggaggccggctttcaactactctgtc
ttcggctccccggcactgaatgactcctcatccctgtttgggagccccatcactgagtct
cctttctacgaggggaggacgacctatggaggagcatctgcacaaaaacatggccagaaa
cgtggcaggacggtctcacccctgcaggtcgcgccccacaccatgagacagcaggtgcgc
ccgaagcccgccagcagcagccgcgggtctggggtcatgtctgtcacagcacagaggatt
ctccacaccctggagaggatgtcaacacccatctctgatgccaagaggattccctcactc
actctgtccacggacgagtcaccgctgggttttacgccctccactaaaaagcgcagggtg
atgggtggcagtttccttgaaccaggcacctcgaggttggagggtcgtcttgcaggacag
cccccggtgcagagactaaacctgtccacacctgcctccatagctaccaacagggcacag
actcattctacttacaggcccaggaaatctgcagtactggctaaagaggaaattttggtt
cctgacagcgaaccagcaacatctgtagcccgagacagggaaccatctcctctcaaagta
atcagcaagccagccagtaagccagctgagtctcggccagcacctgtcaccaagcccagc
agccaggctgcctccacgtggactccacctgcccagctgcctattggtagtgggggcaag
attcgcagggagagatcatacggcacgcagcgtgcacatgctgtgcaggatgaggaagag
gttgaggtaccagtcctaccagagattgccctcccaatagccagcctccccaagtttgac
ttctctcctgcgccatccaaacccctgagcgagggttcaaaggtcagcaccaccccacag
gtgagcagtgtgacgtcatcaccccagttcaccttcgcatctcccatagtcatgtccagc
ccagaggacagcaccccagcagttagcaatactgaaacacccaaattccagttcagccag
cctgcatctccaggcaagtccttccccagtcaggggttgggcacatcctcagcagtctct
gcgggcagttctaccttcctgacgactggtgcagggtcgggcttccagcccaagcggaag
gcaccagagcccgttgttagccccagtgccgcagcctctccaccacctctgaagcaaggc
agcgtcctggatgccctgaaggcagagcctctgccactcaagtcaggcagtgtgctcgat
gcactgaaaggagggccactggttagtaagccagaaacaacaaaagaaaaactcgaggaa
aggaaaaccactggggagggatctgctgcagctaacacaaagactgcatcattaccctct
ctgggggaccagttcaagaagccgtcaggtggctgggactgtgacacctgcatggtgcag
aacacagctgcagccagccggtgtgtggcctgtgacacccccaagcctgggagccagcct
aagctaaccgtgcccaccactgttccccctgtcagttttggtactgatgcagcccccaaa
accaatggttttaaactgggcaccacagcggagggaggcagcgctaacagtggatttaag
tttggatctggaagcgctgtgaactctaccagctctggtttcacgtttgggagtagtagt
gcttctaccgctgcatctgaacaggactccaacactttgggtggcttgaagaaaggcacc
acagactttgtatccactaatgctaatacacaagatgctagtaaatctatatggtcaaag
gcagcatcaggaaataaatggacctgtgatacttgtcttgtagaaaacaagaacgagtca
acaaaatgtgctgcatgtgagtcccctaaacctggcagtgagtctaaaacagctgcatct
acacctgctgtgaactttgggacatcaagtgctttcaagtcgacttcaagttcatctggg
tcactgttagcagcagctaataacggacagaagtgggaatgccagacttgtttagtgtac
aacaccgacgacaagactaaatgtgcagcatgtgaaacgcccaagcctggtagccaaaac
aagtctaccccagcagtcggtgcaagtgggagtggtggtttttccctaggtacgaacagt
tcaggcctggcagcagcaatatctgcacagcagtccaaatgggagtgtgaaacctgtatg
gtccagaatgacaaggatgcgacaaaatgcctcgcctgtgaaacaccgaagccgggcagt
gcccaatcatcttcaggaacaggggggttccagtttggctcccagtcaacatcaacaggg
aaaacggcctcctttggaagcagtactggagggttccagtttggggcaccaaaacctgcc
tcaactgaaacagcgacagattccaaacccacattttcagggttcaagtttggcagtgga
ggtgcagaatctgctccaagcaccgccaccagtggtggtctccagtttggtgcaggaaca
actgcagccagcaccacccccagtggtgggttgtcgtttggagcagggacgacgacagcc
agtactggcgggttcacgtttggagcagccagctctgcgtctggagctgccaccacgaca
tccaacgccacatcgtcagccagcggaggcttcacgttcggcacagggacgacatctggg
gctgctgcctcggtgcctgctgccaccggaggtttcacattcgggacgggaagttcagct
gctggtgctgctgcttctgctgggttcaagttcggagctggaacagcctctcaacagcct
gatgcagctcccaagatgacaagcatagctgacttagccaaggcaggtcagctgagtgta
cccaaacctgcagccggtcagtccacagcaaaaaggagtctggaatcggacaacagcact
ccggccaaggtgaacctgtcttctgccttcggctctggcaccccctttggctcagccaat
cccagcacggcaccaagttttggatccaccactggcgctaaccctccagtgtttggagct
ggtacatcagctgcgcccagctctggactcacctttggtgcaccagcagcagcagcctct
gctacaggcagtgcagcagccaccacatcaggcttcacgtttggtactggctcgtccagc
acggcggctagtacgactcctgcacccttcagctttggtgcaggggcgccccctgccgca
actacagctgccacagcatctgctccatttgtgtttgggggaggagcatcctcagcccca
ggtggctcaactggggggttcaacttcagtggaggacagacagcaccccctgctacaacg
accgcccccagttttggcactccagcctttggagccaaccccaccccagcagcaagcaca
cccttcgcaccagccaccaccgcggtgtccggaggagctactccgttcgggggagccact
agcttcggtgtgcagaccacctcagcaccgagcagtggcccagtgtttggtgcaagtgct
gcacagccagccccaactgctggttttaacttcaacgcacccagccagcccacgttccag
tttggtgcaggctcccagcagagccctgcagtgtttaactttggtgcggcagcccctgca
gcggcagcacctggtggggggttcaacttcgctgcaggggctgggacagcagctccagca
ccgcagcctgctgctccttttaacttcagtgctggggcacagccaggcggaaaccccttc
agtatccagagtactcccagtgcctcccctggtggcagacgggtcatcaagaaggctcag
cgcaggaagagatga
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