Branchiostoma floridae (Florida lancelet): 118408470
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Entry
118408470 CDS
T01074
Name
(RefSeq) huntingtin-like
KO
K04533
huntingtin
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118408470
04131 Membrane trafficking [BR:
bfo04131
]
118408470
03029 Mitochondrial biogenesis [BR:
bfo03029
]
118408470
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118408470
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118408470
Mitochondrial biogenesis [BR:
bfo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
118408470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_N-HEAT_1
HEAT
HEAT_2
Arm_4
Motif
Other DBs
NCBI-GeneID:
118408470
NCBI-ProteinID:
XP_035665180
UniProt:
A0A9J7HVG8
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MATTEKLLKAFESLKAFQQGNVTGEETSTASQTAPVGQMSNLLTTSPAEFTEVARDIVAS
LATGKKELAVGKKDRVAHLVTIADAMCASNFRTMAEFPKFLGISMEMFLASCDDKESDVR
MVADECLNRTVKMLLETNLGRLQVELYKEIKKNGPARSLRAALWRFAELSHLIRPQKCRP
YVVNLLPCFNRICRRQEDAVQETLANSLKKTFPVLGSFTNDAEIKVLLKTFLPNLRSASA
VTRRTAASSLVTFCQHSRKPRHFFCWLLTVLLGMVIPIQEDRKSHTLLGVLLCLRHLVPH
LATLQDLEDDSLKGSFGVTKKDPELSVSTEQLVQIFELVLHYSQHTDHNVVTASLETFQQ
LLRTPPPGLLPVLTRPGSITQSSIFKEGGQHRVGSSSQLSAAGVGEEDSGMEDDRSEVSS
TATDDLPPIVKLNLDPTMQSMEQSSSAADLETLDSSAAESSGIGLLQTGGEGGIFNALEK
ADSLPDTPTTTEFPGNVQDFPEHAAADDVIINADGGSYSNVEIGSVTVEDDFPSESEVSP
VGIVAEFIKTHQRADSNVSAGSQEAERQVTEEVSLAEEGSEVAASAERMMGDVGHYTDEE
VPLIYCTRLLCSSFLLTGHEKGLIRDREVRVSVKALSLGCLAAIFNLHPRALSIKLFRPS
QDTQGPESRQLVRDILLFSNHGDPQLKGNTAVLVGNFIHSALTEARLKYDLWIQAICEEQ
GTPPVLLESLVSCLQTCLTDQASVTCRMACVALKTCLVTLLQSSSGDLGLRLVLATLGQR
DTSYWLGKVELLELLSQVDFKLVKYLEDSFPYMRKGDHSYLGAMNCQQRLLEDIVLHLMG
DDDYRVRHAATAALGRLVPRLFYPVDHPQHDPVVASAKEYSSAHLEQEGQQQSEEPYRPP
PCTMWGYETSGLVSASLESSLSRVVSAIMRRLNSSTSKSLTFGCLHALCQLSQQFPVCQY
TTAWCCVGITTFTPKDSSGRTNLPRPGSRSRSLNGSLTSSMTSSLTSSITSTSSISSVSS
QLSMEESITGSGGGPLPMVLSLLLSSWLPLDLAAHQDALLLAGNLLAGAASRSLKAPYDE
EKPTGKDGVKEVGKEEEDGWHALQDRNLVPLAQQLLSHLARVVNVCSHVIEQVIPGPPAK
TALPSLPNAPSLSPIKRKPKGKDGVDQGSATASPSKSSAKKGSDAGLPTEKEPDRPNKSN
IGTFWQLPGYMKLYSVLKGAYSNYKVSLDPSATEKFLGLLKTVLNVLSQVLEIATFIDIS
KYVEELLSYLKSTVAMEPTSTIQCVEQLLKALFGTNLASQWDGSQTAETSRKPGKATRLS
SNMKPGLYHYCFTAPYTQFTQSLAAASFRTSQAEGEEGGGILSWFKHRSSDKKVSPAIAK
LVKGDKTPIHNYIRLFEPLVIKSLKLYTVTSSVTLQRQVLHLLAQLVQLRVNYCLLDSDQ
IFIGFVIKQFEYIEAGQIRGSETLIPPIFHFLVLLSYERYHSKSIIVMPRIIQLCDGVMA
SGQKATNHAIPALQPIVHDLFVLRGNSKADQGKELDTQREVVVSMLVRLIHYPEVLEMLT
IVLQQCHKESEDRWKKLSRQVVDMVLPMLARQQICLSTPSALNTLHGLFESVTPSSLRPL
DMLLKTLFSPPTDLTSPDSFLRWSSMVLSVLRVLISQSKEEVIMARLQELGLSANIFTNN
VIYRAKGRAVDLDGDAPFEEVPEEALARFLLQVIGALAEEIAFRSNTSVLQREGCHSLAQ
QLAHLLLYVTYILKSGLLRKVLSAAMALPEESPTEAYYSVLH
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacggagaaactgctgaaggctttcgagtcgctgaaggcctttcagcaggga
aatgtcacgggggaggagacgagcaccgcaagccagacggcccctgttgggcagatgtca
aatctgctcactactagcccagctgagttcactgaggttgcccgagatattgtggcgagt
ctggccactgggaagaaagagctggctgtgggcaagaaggaccgagttgctcacctggta
acaatagcagatgccatgtgtgccagtaacttcaggaccatggctgagtttcctaagttc
ctgggaatctccatggagatgttcctggcttcctgtgatgacaaggagtccgatgtcagg
atggtggcagatgagtgtctgaacaggactgtcaagatgctgttggaaaccaacctgggc
cgtctgcaagtggaactgtacaaagaaataaagaagaatggcccagccaggagcctgcgg
gcggccctgtggcggtttgcggaactgtcgcacctgatccggccgcagaagtgtcgtccc
tacgtggtgaacctcctcccgtgcttcaaccggatctgtcggcgccaggaggacgcggtc
caggagacactcgctaactccttaaagaaaaccttccctgtgctggggagtttcactaat
gatgcagaaataaaggttctgctgaagacattcctgcccaacctgaggtcagcgtcggcc
gtgacgagacgcaccgcagccagctccctcgtcacgttctgtcagcactccagaaaacca
cgccacttcttctgttggctgctgactgtcttactgggtatggtgatccctatccaagag
gataggaagtcccacacgttgctaggtgtgttgctgtgtctgcgtcacctggtgccacac
ctagcaaccctgcaggacctggaggatgacagtctaaagggcagctttggtgtcacgaag
aaggaccctgaactgtcagtcagtaccgagcagctggtacagattttcgagcttgtcctg
cactactcacagcacactgatcacaatgtggtaacagcctccctggagacattccaacag
ctgctgcgcacccctcccccaggcctgctgcctgtgctcaccagacctgggtctatcaca
caatcatccatctttaaagagggaggacagcacagagttggaagttcctcccaactttca
gctgcaggtgttggtgaagaagattctggcatggaggatgacaggtcagaggtcagctcc
acggcgaccgatgacctccctcccatcgtgaaactgaaccttgaccccaccatgcagtcc
atggaacagtcctcatctgctgcggacctggaaacgttagactcttccgcagcagagtcc
agtgggatagggttactacagactggtggggaggggggcatcttcaatgcactagagaaa
gcagacagtttaccagacacccccaccacaacagagttccctgggaacgtacaggatttt
ccagaacatgcggccgcagatgatgtcatcattaatgccgacggaggctcgtattcgaac
gtggagataggttcggttacggtggaggacgactttccctcggaaagcgaggtcagtcca
gtgggcatcgttgcagagttcatcaagactcaccaaagggcggactccaacgttagcgcc
gggagccaagaggcggaacgacaggtgacggaggaagtgtcgctggcagaggaggggtcg
gaggtcgctgccagtgcagagaggatgatgggagatgtgggacactacactgacgaggag
gtccctctgatctactgcacacggctgctgtgttcatcctttctcctcactgggcatgag
aaaggcctgatccgtgaccgtgaggtccgtgtgagcgtgaaggccctctcgctgggctgc
ctggcggccatctttaatctccatcccagggcactcagcatcaagctgtttcgaccttcc
caggacactcaaggcccggagagcagacagcttgtgcgggacatcctcctcttcagtaac
catggcgaccctcagctgaagggtaacacggccgtcctggtcggaaacttcatccactct
gctcttacagaagccaggctgaagtacgacctgtggatccaggctatctgtgaggagcag
ggcacccctcccgtcctgctggagtccctggtgtcctgtctgcagacgtgtctgaccgac
caggcttctgtcacctgcagaatggcctgtgtggctcttaagacatgtctggtgacattg
ctgcaaagttcttctggagacctgggactgagacttgtcctggctaccttgggacagaga
gacacctcctactggctgggtaaagtggagctgttggagttgttgtcacaagtagacttc
aaattagtaaaatatctagaggacagttttccatacatgaggaaaggggaccacagttat
cttggggccatgaactgtcagcagagactgttggaggacatcgtgttacacctgatgggg
gatgatgactacagagtcagacatgctgctactgcagcgctgggcaggcttgtaccgagg
ctgttctatccggtggaccacccccaacacgacccggtagttgcttcagccaaagagtac
agttctgcccacctggagcaggagggacagcagcagagtgaagagccgtaccgccctccc
ccctgcaccatgtggggttacgagacgtccggactggtcagcgcaagcctggagtccagt
ctgtccagagtcgtgtctgccatcatgaggagactcaacagttccacttccaaaagctta
acattcgggtgcctccatgccctgtgccagttgtcccaacagttccccgtgtgccagtac
accactgcctggtgctgtgtggggatcaccaccttcactcccaaggactccagcggacgg
accaacctacccaggccgggcagccgctcgcgcagtctcaacggcagtctgactagtagc
atgactagcagcctgactagcagcattactagcacatccagtatcagcagtgtgtccagc
cagctcagcatggaagagtccatcacaggatcaggaggggggcccctgcccatggtgctg
tccctcctgctgtcgtcatggttaccgctggacctggccgcccaccaggacgcactcctg
ctggcaggcaaccttctagcaggcgcagcttccaggtccctgaaagctccatatgatgag
gaaaagcccacagggaaggatggagtgaaagaagtagggaaggaggaggaggatggatgg
cacgcccttcaggacaggaacctggtgccgctggcccaacagctgctgtctcacctggcc
agggtcgtcaatgtctgctcacatgtcatcgagcaggtcatacctgggcctcctgctaag
actgccctcccctccctacccaacgccccctccctcagtcccatcaagaggaagcccaaa
ggtaaagacggagtggaccagggcagtgccactgccagccccagtaagagttctgccaag
aagggctcagatgcaggtttgcccacagaaaaggagccagaccgccccaacaagagtaac
attgggaccttctggcagctgccggggtacatgaaactgtactctgtactgaagggagcc
tactctaactataaggtatccctggaccccagtgcaacagagaagttcttaggtctgcta
aagactgtactaaatgtgctgtcccaggtgctggagatagcaaccttcatagacatcagc
aagtatgtagaggagctgcttagttacttgaagtctacggttgccatggagcccacatca
acaatccagtgtgtagaacagctcctgaaggctctcttcggcaccaacttggccagccaa
tgggacggctcgcaaactgcggagacttcgcgtaaacccgggaaggcaacccggctgtcc
tccaacatgaagcctgggctgtaccactactgcttcaccgcgccctacacacagttcaca
cagtctctggctgctgccagcttcaggacatcacaggcagagggggaggaagggggaggg
attttgagctggttcaaacacagatcatcagacaagaaagtatcgcctgccatcgccaaa
ctggtcaagggagacaagactcccatccacaactacatccgtctgtttgagccgctggtc
atcaagtctctgaagctgtacacggtgacaagctccgtcacactgcagagacaggtgctg
cacctgctggcacagctggtacagctgcgcgtcaactactgtctgctcgactccgaccag
attttcataggttttgtcatcaagcagtttgagtacattgaagctggtcagatcagaggt
tcagagacactgatcccgcccatcttccacttcctggtgctcctgtcgtacgagcggtac
cactccaagtctatcatcgtcatgccacggatcatccagctgtgtgacggagtcatggcc
agcggacagaaggccaccaatcatgctatcccagccctgcagcccatcgtgcatgacctg
tttgtgttgagaggcaacagtaaggctgaccaggggaaggagctggacacacagagggag
gtggtggtgtccatgctggtcagactcatccactatccagaggtgcttgagatgctgacc
attgtgctgcagcagtgccacaaggagagtgaggaccggtggaagaaactgtccagacaa
gtggtggacatggtgctgcccatgctggccagacaacagatctgcctgtccaccccgtct
gcgttgaacaccctgcatggcctgtttgagtcggtcacccccagttccctgcgaccatta
gacatgctgctcaagactctcttctctcctcctacagatctgaccagtcccgacagtttt
ctccgctggtcctccatggtgctgtctgtcctgcgagtgctgatctcccagtctaaggaa
gaagtcatcatggccagactacaggagctaggactgtctgccaacatcttcacaaacaat
gtgatttatcgagctaaaggcagagctgtagacctggatggtgatgctccgtttgaagag
gttcctgaagaggctctagcaagatttttgttgcaagtgattggtgcgctggcagaggag
attgccttccgctccaacacatcagtgctgcagagggagggctgccacagcctggcacag
cagctggctcacctgctgttatatgtcacctacatcctcaagtcaggattgttgaggaag
gtgctatctgctgccatggccctaccagaggagtcccctactgaggcatactacagtgta
ctacactaa
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