Branchiostoma floridae (Florida lancelet): 118408556
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Entry
118408556 CDS
T01074
Name
(RefSeq) laminin subunit alpha-2-like
KO
K05637
laminin, alpha 1/2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04512
ECM-receptor interaction
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118408556
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118408556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_G_1
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
118408556
NCBI-ProteinID:
XP_035665261
UniProt:
A0A9J7HSX2
LinkDB
All DBs
Position
2:14516292..14624929
Genome browser
AA seq
3074 aa
AA seq
DB search
MSLDGGLFPLIFNLATNAKITSNATCGLNGRENYCKLVEHVPGEPFPQDPQCSVCDDNDP
SLRHPIENAIDGTNSWWQSPTISQGRQYNWVTITLDLGQIFQVAYVIIKTAITPRPGNWI
LERSLDGVRFRPWQYFAISDSECYQNYNITPTIGTPQFTQDDEVICTSFYSRFPPFENGE
IHVSLINGRPSVDNPSDTLMEFTSARYIRLRLQRIRTLNADLMTLNSQRPDTIDAFVTRR
YFYSIKDVSVGGQCICFGHAKVCPQLPGAQTLRCQCEHNTCGESCERCCPLFNQKPWQPG
TAESSNECEACQCFGHADECVYDQGVADRRESVNILGIYEGGGVCQNCRANTMGNNCEQC
IDGFYRPAGIPRDDPNPCRECQCNLIGEDPSRRGQCVKDDTRIAEGLEPGQCYCRPGFGR
PRCDRCARGYKGYPNCEPCGCSVAGSVNEDVCVGPCICKDNVVGQFCDRCKAGYYSLQEN
NPYGCQPCFCFDVTNQCQSVAWYREQITTMLGWTVRAPQGDRFVYPRDDGFNRITVPHFE
AARDLGSLYYWSAPREYLGNQLESYGGVLRYTVSYRTSDRGDIGDPSARPTVDIDVIMEG
NGRSITYTENRQVGPSVEETVTVYLIPSGWREYADPNSAFNVGARISRTELMTVLADVTK
LLIRATYNTNPVESSLSSVSMESASTDAVGPTLASDVEQCQCPIGYTGLSCEGCIKGYRR
VNGQLYGGQCEPCQCNGHAEECDDVTGTCLSYLSNSALVQSCLHNTAGRNCEVCAPGYYG
DATRGTPDDCSRCACPLVESSNNFSPTCVAMDGGVFCDRCPPGHEGFQCEKCADGYFGNP
LEVGNVCKQCICNGNIDPTDEGNCDAITGECLKCIGNTVGDECERCANGYFGDAINAKNC
QRCLCHPRGSYQEDCDLNTGQCRCRPNVIGRDCDQCAVGFFGINSGEGCQACNCDSTGSL
STQCDEDGQCRCKPGVGGQQCDRCEVGFYGFSEDGCKACDCSSTGGFCDDQTGDCICPPN
TVGIRCESCRPETFGWDGLNGCTPCDCDPVGSEGNDCDLTTGQCRCLDDFSGRQCNMCQF
GYFDFPTCRECTCNQAGTDPNTCNANDVCACADNGTCSCKPNVEGKSCTLCKEGSFNLEE
ENPNGCTSCFCFGITDQCRQANLVTEQVTPDADNNNFFLSNIRRTQQTQRGLTIRENEVE
VDARAAAQELPFSPVYLSLPDVFLGNKITSYGGKLRYTVEYEEDPNTPPGVGNTISQQED
GPQVVIHGIDTAIVLDIPEVIAAVPARHEIDLVEFKWQLYESLLSRTPTRAELMMILQNI
QAILIKATYGPRMLRCKISNISLDVGRERRSNDTGREPPTDSVEECMCPPGYTGLSCHEC
AEGYRRVMNGPYLGRCIPCDCNNHSAECDQITGICENCDDNTTGQNCENCADGFFGNAVP
GADDSGCKRCACPLVNDENNFSSTCRKDADGNITCTGCERGYTGRRCERCEQGYYGNPTI
PGGRCYECACDQSGSLSPICDQVTGACQCQPGITGRACDQCQPRYALTERGCINCDDECT
GVLLDDMERLEALLQSRNLSGVFPAPWPTLMALENKTLELQAQLKPVIEAFNRLQDKAQN
ISDLERPADRLLRRANDAVRNAPPVDEDAGKVRNRAADLEMRVMNSARKLQDLVEQLVNF
TRDLKAQLREAHRILDQIRGRDLNGYRADADRELRLAKDTLERALLDFANKTADKLAAVE
ALEGKLNRTLGQLNDLEEAVRDAHMKTNEADRLNDNNEDVLRDLDEIRRLTEENVDDIRD
AIREGDEVVKNARRLLSEARIALEEAKNNDQALRNVRPELQRRVDLLTQKLAGPPDLEDL
VEDAEKHAHNLRARGLERLFAETKNFSSDALAAATAYDNIVQAFEDAERAANEANVAAKE
GLDLATGENSLSKLGEESKQRSYDLLDEAVKLRDRVDDLGNRVADKEAEIAQGNQNITDL
KKAVQDLKDRMDRLTDDLGDAAKDVQDRAVDADNVAQGVIDEVDGLEPDVDALVDQFGVI
GSASGDTNADIRAAEGDLRTASRNLRDLKDLADDLKNEERNARALKDQFGRNLADLWEMI
RRARNLANSIKVSVANDGTCKRSYKPMSFYTNLYKSSLYKPQNRSTSTIELNFKTTEPDN
LLFYLEGRDSKDFLSLETRNSRVVFRWNVGSGIGKITNDSLPISDNRWYRIVAQRIGTDG
KLLVQRSRQPRAKLDGPQTVTGSAPTGPYTILDVDSSDDIYIGGVPAEKQQEFEVTSDFK
GCMGEVLLDDEPIGLWNFATTSGTCEGCVESPRGETTASNTYTFLGDGFVVMPKIPSWND
RTTFLSFRFKTFAEDALIFFVADETQRDYFAVYLKDGRVGVQYNLGSGKVEILSDDRHST
GVWSFVSVSRTGQTANLTVTGEQNVKRGSSPETLTDLAVTDRMYIGGLPGSIIVVTKQLD
IPIPTTSFIGCLQDVMVGRHSQKLDENLAIEIRGMTPGCRDQVVRTIGMTGDPGAYAALP
NTDRKGNLANKGSVLLGFTTSTEDGLLLLATGGSRRRRRQAGTAFYSLSIVKGRIQARFS
TGVGSPLTIVTRNSAGRFDDGEHHNIRVTREGASFEISMDDDAKRSGKLAGVDNISVNKL
YIGGIPGNMERNFRNMAGTLSPFKGCIRDLVLNGNLIDMGHMVEFRKADIGRCVDQPSEP
RPITQPPPNTGPPTGCAAPANQTSKIISGAFQFGLTNNSHMTFKIDPNNVKEEFSVKVEI
RTFESDGLVFYIAKDDHKDFAAIQLEGGLVKFKFDNGKGPVEISSTVTVNDGKRHMLEIA
TNGRNGILTIDGRYRQKGKSPGEFTVLDLTEDFYLGGLHIYNDEYIYNATKRIGKLTNSM
EMCVRMLEIQGELQNLARPATRADTGSCFQKVTGGSYFGGTGYAVLNDSYHVGQDMEVVF
EFRTSQREALLLSVSSERPDALAIELKDGKITLRANNGPGVIQPSDITFRVDNGLAPFEV
TYDPEVHGQQDSNKFSLCDMKFHKVEARKVKNILKVVVDGNEVPPATGPQDNYSAVTKNP
LYMYIGGYPGMHTF
NT seq
9225 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggatggaggtctcttccctctgattttcaaccttgctacgaacgcgaagatt
acgtccaatgcaacatgcggactgaacggacgcgagaactactgcaaactggtggaacac
gtgccgggggaacccttcccacaggacccacagtgcagcgtctgcgatgacaatgacccg
tccttacgacatcccatagagaacgccatcgacgggaccaacagttggtggcagagtcca
accatctctcagggacgacagtacaactgggttactataacactggacttggggcagatc
ttccaagtggcttatgtgatcatcaagacagccatcactccgcgtcctggcaactggatt
ctggagcgttccttggatggagtccgtttccgcccgtggcagtactttgccatctcggac
tcggaatgttaccagaactacaacatcacccccaccattggtacgccccagttcacccag
gacgatgaagtcatctgcacatccttctactccaggtttccaccatttgagaatggagag
attcacgtctcactcatcaatggtcgtcccagtgtagacaacccatcagacaccctcatg
gagttcacctctgcccgttacatccgcctgcgcctccagaggattcgcactctcaatgct
gacctcatgaccctgaattcacagcgccctgacaccatcgatgcattcgtcaccagaagg
tacttctactccatcaaagatgtctctgttggaggacagtgtatctgttttggtcatgcc
aaagtctgcccacaacttcctggtgcccagactctgaggtgccagtgtgaacacaacacc
tgtggtgagagctgtgagcgctgctgtccactcttcaaccagaaaccatggcaacctgga
acagctgagagcagtaatgagtgcgaagcctgccagtgctttggccatgctgacgagtgt
gtgtatgaccagggtgtggctgaccgcagggagagtgtcaacatccttggcatctatgaa
ggcggtggtgtctgccagaactgcagggccaacaccatgggtaacaactgtgaacagtgc
attgatgggttctaccgacctgcaggcataccaagggatgatcccaacccgtgcagagaa
tgccagtgtaaccttattggcgaagaccccagtcgaaggggccagtgtgtgaaagatgac
accaggatcgcagagggcttggagccaggccagtgttactgcaggcctggctttggcaga
ccaaggtgcgaccgctgtgcccgaggttacaagggttatcccaactgtgaaccatgtggc
tgtagtgtcgctggcagtgtgaatgaagacgtctgtgttggcccatgcatctgcaaggac
aatgttgtgggtcagttctgtgatcgctgcaaagctggctactacagcctgcaagagaac
aacccatacggctgccagccatgcttctgctttgatgtcaccaaccagtgtcagagtgtg
gcatggtacagggagcagatcaccaccatgctgggttggacagtcagggcaccccagggg
gacaggtttgtgtaccccagggatgatggcttcaaccgcatcactgtgccgcacttcgaa
gctgccagagacctggggagtctgtactactggagtgctcctagggaatacctcggcaac
cagttggagtcgtatggcggagtactacggtatacagtgtcgtacaggacatctgaccga
ggtgatatcggggacccctcagcaagacccactgtggatattgatgttatcatggagggt
aatgggaggagcatcacatacacagagaacagacaggtgggcccaagtgtggaggagact
gtcactgtctacctcatccctagtggatggagggagtatgcggaccccaactctgccttc
aacgttggtgcacgaatctcccgcactgagctcatgacagtcctggctgatgtgaccaag
ctgttgatcagggcaacgtacaacaccaaccctgtggaatcaagcttgagttctgtaagc
atggagtcggcctctacagatgctgtgggccccactttggcatctgatgtggaacaatgt
cagtgcccgattggttacactggcctgtcctgtgaagggtgcattaagggctaccgacgt
gtgaacgggcagctgtacggagggcagtgcgaaccctgtcagtgtaacggccatgcagaa
gagtgtgatgatgtgacaggaacatgtttgtcgtatctgtcaaattctgcccttgtgcag
agctgtctgcacaacacagccggacgaaactgcgaggtctgcgctcccggttactatgga
gacgccacccgaggaacgcccgacgactgctcccggtgtgcctgccccctggtggagtcc
tccaacaacttcagccccacctgtgtggctatggatgggggagtcttctgtgaccgctgc
ccacccggacatgaaggtttccaatgcgaaaagtgtgctgacggctattttggcaacccc
cttgaggtggggaatgtttgcaaacagtgcatctgtaacggcaacattgaccctaccgat
gaaggcaactgcgacgccatcaccggcgagtgtctgaagtgcataggcaacacagtaggc
gatgaatgtgaacgctgtgctaatgggtactttggagatgccatcaatgccaagaactgt
cagcgatgcctttgccacccacgtgggtcctaccaggaagactgtgacctgaacaccggg
cagtgccgctgcagacccaatgtgattggccgggactgtgatcagtgtgccgtggggttc
tttggtataaactctggggaaggctgtcaggcctgtaactgtgacagtacaggctccctg
tccacccagtgtgatgaggatggacagtgtcgctgcaaacctggtgttggaggacagcag
tgtgaccgctgtgaagtcggcttctacggcttctctgaggatggatgcaaggcctgtgac
tgctccagtactggtggcttctgtgatgaccaaaccggagactgcatctgcccgccgaac
acagtaggcatccgttgtgagagctgcagacccgagacctttggttgggatgggctgaat
ggctgtaccccctgtgactgtgatcctgtgggatcagaaggaaatgactgtgatctgacc
actggacagtgcaggtgccttgatgacttcagtgggaggcagtgcaacatgtgccagttt
ggttactttgacttccctacctgtcgggagtgtacctgtaaccaggcagggactgaccca
aacacctgcaatgccaacgatgtctgtgcttgtgctgacaatgggacatgctcatgcaag
cccaatgtggaaggtaaatcctgcacactttgtaaggagggcagcttcaaccttgaggag
gagaaccccaacggctgcaccagctgtttctgctttggcatcacagaccagtgtaggcag
gccaaccttgtcacagagcaggtgacccctgatgcagacaataacaactttttcctgagc
aacatccgtcgcactcagcagacccagagaggcctgactatcagggagaatgaagttgaa
gtggatgccagagctgcagcccaagagctgcccttctctcctgtctacctcagcctaccc
gacgtcttccttggcaacaagatcacttcctatggaggtaagctgaggtacacagtggag
tatgaagaggacccaaacaccccacccggcgttgggaacaccatcagccagcaagaggac
ggtccccaggtggttatccacggcattgacaccgccatcgtgttggacatcccagaagtc
atcgctgctgttcctgcaaggcacgagattgatcttgtggagtttaaatggcagctgtac
gagtccctcctgagtcgtacacccacccgtgctgaactgatgatgatcctacagaacatc
caggccatcctcatcaaagctacgtatggaccccgcatgctcagatgcaagatcagcaac
atctctctggacgtcggccgtgaacgccggtccaacgacactggtcgggagcctcccact
gacagtgtggaggaatgcatgtgtcctcctggctacactgggctgtcatgccatgaatgt
gctgaaggctacaggcgagtgatgaatggtccatacttgggccgctgcatcccgtgtgac
tgcaacaatcacagtgcagagtgtgaccagatcacggggatctgtgagaactgtgacgac
aacacaactggtcagaactgtgagaattgtgcagatgggttctttggcaacgctgttcca
ggagcagatgattcaggctgcaagcgctgtgcctgtcctctggtcaacgatgagaacaac
ttcagctcaacctgtcggaaggatgcagatggtaatattacatgtacgggctgtgagcgg
ggctacacaggcaggcgctgtgagagatgtgaacagggttactatggcaaccctaccatt
ccgggcggccgttgctatgaatgtgcgtgtgaccagtccggctctctgagccccatctgt
gaccaggtgactggcgcgtgccagtgtcagcctggtatcaccggccgtgcttgtgaccag
tgccagccaagatacgccctgactgagagaggctgcataaactgtgatgatgagtgcact
ggtgtgctgttggatgacatggagcgtttagaagctctgctgcagtccaggaacttgagt
ggcgtattccctgcaccatggcccaccctcatggcccttgaaaacaagactttggaactc
caagcccaactgaagcccgtcattgaagccttcaaccggctgcaagacaaggctcaaaac
atctcggacctggaacgtccagctgacaggctactcaggagggccaatgatgctgtccgt
aatgccccacccgtggacgaggatgctgggaaggttcggaaccgcgcagctgaccttgag
atgagggtcatgaactctgcccgaaagctgcaggatcttgttgaacaactggtgaatttc
acacgtgacctcaaggcccaacttcgcgaggctcatagaatactggaccagattcgcggc
agagatctcaatggttacagagctgatgccgacagggaactcaggcttgccaaggacact
ctggagagagccctgcttgactttgccaacaagactgcggacaaactggcagcagtagaa
gccctggagggaaagcttaacaggactctcggtcagctgaatgatctggaggaagctgtc
cgtgatgcccacatgaagactaatgaagctgaccgtcttaatgataacaacgaagatgtt
cttcgagatctagacgaaatcaggagacttactgaagagaatgtggacgacattcgtgat
gccatcagggaaggtgatgaagttgtgaagaatgctcgcagactcttgtcagaggctcgc
attgccctggaggaggccaaaaataatgaccaagccctgaggaatgtccgaccagagttg
cagcgccgggttgacctcctgacccagaagcttgccggaccccctgacctggaagacttg
gtggaggatgcagagaaacacgcccataatctgagggcaagaggtctagaaaggctgttt
gctgagaccaagaacttctcctcagatgccctggctgctgccacagcctatgacaacatc
gtgcaggcctttgaagatgcagagagagctgcaaatgaagccaacgtggctgctaaagaa
ggactagacctggctacaggagaaaactctctgagtaaacttggcgaggagtcaaaacag
cgcagctatgacctgttggatgaagctgtgaagctcagggacagggtggatgacttagga
aatagagtggctgacaaagaggcggaaatagcccagggaaaccaaaatattactgacctg
aagaaagctgtccaagatcttaaggacagaatggatcgtctgacagatgacctaggtgat
gctgccaaggatgttcaagacagagcagttgatgctgacaatgttgcccagggggtgatt
gatgaagttgatggcttagagccagatgttgacgctttagtggatcagtttggagttata
gggtctgcatctggtgacaccaatgctgacatcagagcagcagaaggagacttgaggaca
gcgtctcgtaaccttcgcgatcttaaggaccttgctgacgacctgaaaaatgaagaacgt
aatgcccgcgctctgaaggaccagttcggccggaacttggctgacctatgggagatgatc
agacgggcccggaacctagccaactcaatcaaagtgtcggtggccaacgatggaacatgt
aaacgatcctacaaaccaatgagcttttatacaaatctgtataaaagctccttgtacaaa
ccccagaatagatccactagcaccattgagttgaacttcaagacaactgagccagacaat
cttctcttctacctggaaggcagggattctaaagacttcttgtctttggagactcgtaac
agccgagtggttttccgctggaatgttggttctggtatcggcaaaatcacaaacgacagc
ctgccaatatctgacaatagatggtaccgtatagttgcccagcgtatcggcacagatgga
aaactccttgtacaacgatccaggcagcccagggctaaattagatggtcctcagactgtg
actggttctgcaccaacgggcccgtacaccattcttgacgtagacagcagcgatgacatc
tacataggcggtgttccagcagagaagcagcaagaattcgaagtgacttccgacttcaaa
ggctgcatgggagaagtactgcttgatgatgaacccatcggcctctggaactttgctacc
acctctgggacctgcgagggttgtgtggaaagcccacgaggagagactactgcttccaac
acctacaccttcctgggagacggatttgtagtgatgccaaagataccctcctggaatgac
agaactacttttctcagcttccgcttcaagacctttgcagaagatgcactcatcttcttt
gttgctgatgaaacccagcgagactactttgctgtgtacctgaaagacggaagagttgga
gtacagtacaacctgggtagtggaaaagttgagattctctccgatgacaggcacagcact
ggagtatggtcctttgtaagcgtctccaggactggccaaacggctaacctgactgtgaca
ggtgaacaaaacgtgaaaagagggtcgtcccctgaaacccttactgaccttgcagtcacc
gaccgcatgtacattggaggtctgcctggaagcatcatcgtggttactaagcagctggac
attcccattcccaccacctccttcatcggatgtctgcaggacgttatggtgggtaggcat
tcccagaagctggatgagaacctggcaatagagattaggggcatgacaccaggctgtcgg
gatcaagttgtccgcaccattgggatgactggagacccaggtgcctacgcagcccttccg
aacacagacaggaaaggaaacttggcaaataaagggtcggtgttactcgggttcacaaca
agtacggaggatgggctgttgctcctggcaaccggtggcagccgcaggaggagacgacag
gctggaacggccttctactctctgtccattgtgaaaggtcgtatccaagctcggttcagc
actggagtgggtagtcctttaactatagtaacaaggaacagtgctggaaggttcgatgat
ggagagcaccacaacatcagggtgacgagggaaggtgccagttttgagatctcaatggat
gatgatgccaagcgatcaggcaaactggcgggtgttgacaacatatctgttaacaagttg
tacattggtggtattcctggcaacatggagaggaacttccgcaacatggctggaaccctg
tctccattcaagggctgcataagggatttggttctgaatggaaacctaatcgacatggga
catatggtagaatttcgcaaggcagacatcgggcgatgtgtggaccagccgagtgaaccc
agacccatcacccaacctcccccgaatacaggccctcctactggctgtgcagctcctgcc
aaccaaacctccaagatcatttcaggagccttccaatttggactgactaacaacagccac
atgacattcaagatagatcccaacaatgtcaaggaagagttttcagtgaaggtggagatc
cgcacctttgagtcggatggcctggtgttctacattgccaaagacgaccataaagacttc
gctgccatccagctggaaggtggtctggtgaagtttaagtttgacaatgggaagggtcca
gtggagatcagcagcacagtcactgtgaacgatggaaagcggcatatgcttgaaattgcc
acaaacggcaggaatggaatcctgaccatagatggacgttacagacagaagggcaagagc
ccaggagaattcaccgtcctggatttgactgaagacttctacctgggaggtcttcatatt
tataacgatgaatatatatataatgctaccaagaggataggaaagttgaccaacagcatg
gagatgtgtgtgcgtatgttggagatccagggtgagctacagaacctggcccgaccagcc
accagggctgacacggggagctgcttccagaaggtcactggaggatcatacttcggtggc
acaggatatgcagtattaaatgactcgtaccatgtaggacaggacatggaggttgtgttt
gagttcagaaccagccagcgggaagccctcctgctcagtgtgtcatctgagaggcctgat
gctctcgccattgaactcaaggatggcaagatcacccttcgtgctaacaatggtccagga
gtaatccagccttctgatatcacattccgtgttgacaatggactggcaccatttgaagtg
acctatgacccagaggttcatggtcaacaagacagcaacaagttcagcctctgtgacatg
aagtttcacaaagtggaggctcgtaaggtgaagaacatcctgaaggtggtggtggatggc
aatgaagtaccgcctgcaaccggtccgcaagacaattactcagcagttaccaagaaccca
ctctacatgtacatcggaggatacccaggcatgcacactttttaa
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integrated database retrieval system
