Branchiostoma floridae (Florida lancelet): 118409118
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Entry
118409118 CDS
T01074
Name
(RefSeq) non-neuronal cytoplasmic intermediate filament protein-like
KO
K07610
desmin
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04519
Cadherin signaling
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118409118
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118409118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bfo04812
]
118409118
Cytoskeleton proteins [BR:
bfo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
118409118
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
SPZ1-like
Golgin_A5
DUF8440
MRPL52
FUSC
Occludin_ELL
DUF6711
Motif
Other DBs
NCBI-GeneID:
118409118
NCBI-ProteinID:
XP_035665878
UniProt:
A0A9J7KLU4
LinkDB
All DBs
Position
2:27763527..27767228
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AA seq
250 aa
AA seq
DB search
MIQPKTSEAIRSSVRSSLVARGEDFSRSGPESFKARTRAIRAGNLITSLGGPGGAQQTMA
GARKARAQEREELSALNNRFASYIEKMRSLQQRNCTLEAQVLKLQATETTAHTKALYEKE
TRDLRTLVDELSEEKAKMVLERNQWREQAEEYKRKWEDEAAWHAELNTEVSKLNKDLDAV
TLVRLDLQNKIATMQQEIDFMVVVHKHELKQIQDQLNESLSIAPVDWTQEAGRDVIAELY
DLRQLCTVST
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaccgaaaacaagcgaggcaattcgaagctctgtaaggtcctctttggtcgcc
aggggtgaagacttcagtagatccggacccgaatctttcaaggcaagaacacgcgccatc
cgagccggcaatctgatcacatccctgggagggcctggaggcgcacagcagaccatggcc
ggcgcacgcaaggctcgagcccaggagagggaggaactatccgccctgaacaaccgcttt
gcctcttacatcgagaagatgcgctccctccagcagcgtaactgcacgctggaggcacag
gtgctgaagctccaggcgacggagacgaccgcacacacgaaggcgctttacgagaaggag
accagagacctgcgcacgctggtggacgagctgtccgaggaaaaggccaaaatggttctg
gagagaaaccaatggcgggaacaggcagaggagtacaaaagaaagtgggaggatgaggca
gcctggcatgcggagctgaatactgaggtttcaaagctcaataaagacttggatgctgta
acgctagtacgtctggacctgcagaataagattgctacgatgcagcaagagatcgatttt
atggtggtggtgcacaagcatgaactgaagcaaattcaggaccagttgaacgagagcctg
tccattgcacctgttgattggactcaggaggccggacgtgacgtcattgctgaactgtac
gacctgcgccagctatgcaccgtctcaacatga
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