Branchiostoma floridae (Florida lancelet): 118409250
Help
Entry
118409250 CDS
T01074
Name
(RefSeq) nucleolar protein 6-like
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118409250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfo03009
]
118409250
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118409250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap
Nrap_D4
Nrap_D2
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
118409250
NCBI-ProteinID:
XP_035666020
UniProt:
A0A9J7HWM0
LinkDB
All DBs
Position
2:27144254..27161828
Genome browser
AA seq
1221 aa
AA seq
DB search
MSGQGEDDSDISEEFSGEENEGWDEDISDEDDVIDEEEEEEEEETNQMEEAGRNIQQLAK
RVLEDEETTDQPPTKSVRTGKPDLYRPPTNEEMNQLKETENLFQSSLFRMQIEELVSEVT
PKNKKSPALDKVLHSLNEIVMKLPKTDSKELTDQSWLPSNVKVPIQQSPYQVKGHFHFAP
PTSMKVVGSYLLGFCTKPGMNVDVLLEIPKECLQAKDYLNHRYHRKRALYLACLAASLDK
QDLFTSVMFTFFHQDCNKPVILLKPSGKAGKHYTIRLHACPPEGFFKPSRFHPDKNNIRS
DWYMGKGRDQDSEPPTPHYNSSILVDMTMAEHLHHLFSLSADFPAMREGLVLLKVWLHQR
ELDTGSGCFSGFLMSMLLSYLLSAHKLSKVMSSYQIMKNVLQYLANSDWSTQGISLASCV
TAEDVPTLSDFHQAHQVVFVDPTGHLNMCADMSTATYARVCHEARQAVAILEDKSLDGFQ
LLFMQTVPFAHKFDHIFHITRVPRLRLVCEHMSLQDAVMDHCGNYLMAALPSILQLLNKA
LGNRVSLIGVRGHDFGQWSIGDAPPSLKDIGRLTFGLLLNTEFSTSVLDKGPPADQPQAA
EFCEFWGDKSQLRRFQDGTICEAVVWQGSNIAERRLVCCQVIQHILNRHANIPQSIIKYF
GGHLDSLLSRPNLQGGTAAQSTDTHDKLHKSQPQGKKAKKSKNAPKEQLLDPNQNSTSHP
GTGDEENVTVMRVYNDLCRILRGLQDLPLNITSIQGTSPVFRYAEVFPPRPAHMKKTKDK
TVVQGHIQVPVSGQPCPPFVPALKVICHMEGSGKWPEDADAIRRVKAAFHIKLGELLHKQ
HGLVTSAATGHVDIAMGGFVFQLVIAYHREVNILKLEKTAEGLLRERDNEASRHLERETV
MLPKLTSALHGLQQLYSSFSGCLRLAKRWVSAQLLHRHVPDVMVDLLVAHVFLHPQPLTP
PGSPAVGFLRFLHLLSTHDWKMNPLIVNFNRELKAADLQEISNQFTSCRSQLPIMFIATP
NNKLTSHWTKAKPTVQVLQRLISLSQEALKMLEVQILTASDGTDFKQVFRPPLDIYDVII
HLNPWNVPRRSEGVDYLKLKGCRDVPTDGGMGQGSKEILPVVEFDPVQMYLEELEDTYGD
MALFFHDPCGGLYITALWKPAAFTAKPFKVTTLNGRAPDLDQSGEDLMMIPNVAAILEDF
HSLGKGLVILVDVKKERPVVR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacaaggagaggacgatagcgatatatctgaggaattctcaggagaggaaaat
gagggatgggatgaagacatctcagatgaggatgatgtcattgatgaggaggaggaggag
gaggaggaagagaccaatcagatggaggaagctggaaggaacatccaacagctagccaaa
agggtgcttgaagatgaagagacaacagatcaaccacctacaaagagtgtccgtacaggg
aagccggacttgtacaggccacctaccaatgaagagatgaaccaactgaaggagacggaa
aatcttttccagtccagtcttttcaggatgcagatagaggagcttgtttctgaggtcaca
cccaagaacaagaagagcccagccctggataaagtacttcactctttaaacgagattgtg
atgaaactcccaaagactgactccaaagagttgacggaccagtcatggttgcctagcaat
gtgaaagtcccaatccagcagtcaccataccaggtcaagggtcacttccacttcgcccct
cccaccagtatgaaggttgtgggcagttatctgctcggcttctgcaccaagcctggcatg
aatgtggatgtgttactggagattcccaaggagtgtctacaagccaaagactacctgaac
cacagataccacaggaagagagccctgtacctggcctgcctggctgccagcttagataag
caggacctgttcaccagtgtcatgttcaccttcttccaccaagactgcaacaaacctgtc
attttactgaaaccatctgggaaggcaggaaaacattacaccatcagacttcatgcctgt
ccaccagagggcttcttcaaacccagccgcttccacccagacaagaacaacatccgcagt
gactggtacatgggaaagggtagagatcaagactctgagccccccaccccacactacaac
agcagtatcctggtggacatgacgatggcagaacacctgcaccacctgttctccctgtca
gctgacttccctgccatgagggaggggctggtgctgctcaaggtgtggctgcatcagagg
gaactggacacgggttcaggctgttttagtgggttcctgatgtccatgctgctgtcctac
ctgctgtctgcacacaagctcagcaaggtcatgagcagctaccagatcatgaagaatgtg
cttcagtacttggctaactcagactggagtacccagggcatcagtctagccagttgtgta
acagcagaagatgtgcccacgttgtcagactttcaccaggcccaccaggtggtgtttgta
gaccctacagggcacctgaacatgtgtgcagacatgtcaacagcaacatatgcaagagta
tgccatgaagccagacaggctgtggctattttggaggacaagtcgctagatgggttccag
ctgctcttcatgcagactgtgccttttgcacacaagtttgatcacatcttccacatcacc
cgtgtgcccagactgcgcctggtgtgtgaacacatgagtctacaggatgctgtcatggac
cactgtgggaactacctcatggctgcactacccagcatcctccagctgctcaacaaggca
ctggggaacagggtcagcctcataggggtcaggggtcatgactttggacagtggtccatc
ggtgacgcccctcctagtctgaaggacattgggaggttaacgtttggtctgctgctcaac
actgagttctccacaagtgtgctggacaaaggaccacctgcagaccaaccacaggctgcg
gagttctgtgagttttggggagacaagtcccagctgcggaggttccaggacgggaccatc
tgcgaggcggtggtgtggcagggcagcaacattgctgagaggagactggtgtgctgtcaa
gtcattcaacacatcttgaacagacatgctaatatcccccaaagtatcatcaaatacttt
ggtggtcacttggacagcctgctgtcccgtcccaacctgcaagggggcactgctgcacag
tcaactgatactcatgacaagctgcacaagtcacaaccgcaaggaaagaaagcaaagaaa
agcaagaatgcaccaaaggagcagctcctggatccaaaccaaaactcaacctcacatcct
gggactggtgatgaggagaatgttacagtcatgagggtctacaacgacctctgtcggatc
ctgcggggactgcaggacctgcctctgaacatcacctccatacagggcacctctcctgtc
ttcagatatgctgaggtgtttccccctcgccctgcccacatgaagaagaccaaagacaag
acagtggtgcagggtcacatccaggtgccagtctccgggcaaccctgtcctccttttgtt
ccagctttgaaagtgatttgtcatatggagggcagcggaaagtggccagaggatgctgat
gccatcagaagagtgaaggctgctttccacatcaaactgggagaactgttacacaagcag
catggcctggtcaccagtgcagctacaggacatgtggacattgccatgggaggttttgtg
ttccagctggtgattgcataccaccgagaggtcaatatcctgaagttggagaaaactgcg
gaaggtctactgagagagagagacaacgaggcttcccgacacctggagcgggaaactgtc
atgctgcccaaactcacgagtgctctgcatggtctgcagcagctgtattcatcgttcagc
ggctgtctacggttggccaaacgctgggtgtcggctcagctcctacacagacacgtgcct
gacgtgatggtggacctgctggtggcacatgtcttcctccacccccagcctctcacccct
cctggctcccctgctgtcgggttcctgaggttcctccatctcctcagcacacatgactgg
aagatgaaccctctcatcgtcaacttcaacagggaactcaaagccgcagatttgcaggaa
atctccaaccagttcacttcctgtcgctcccagctgccaatcatgttcatagccacgcct
aacaacaagctcacatcccattggacaaaagctaagcccactgtccaggttctccagagg
ttgatctccctgtcccaggaggccctgaaaatgcttgaggttcagattctgacagcgagt
gatgggacagactttaagcaagtgttccggcctccccttgacatctacgatgtcatcatt
cacctcaatccatggaacgttccacgtcggtctgagggggtggactacttgaagctcaaa
ggctgcagggacgtaccaactgatggtgggatgggacagggtagcaaagagatcctacct
gtggtagagtttgatccggtccagatgtatcttgaggaattagaggacacatatggagat
atggcactgtttttccatgacccctgtggaggtctttacatcacggcactgtggaaacct
gccgcattcacagccaaaccattcaaggttacgaccttgaatggccgtgcgcctgacctt
gaccagtcaggagaagacctgatgatgattccaaatgtggcggccattttggaagacttc
cactcccttgggaaaggcttggtgatattagtagatgtcaaaaaagaaagacctgttgtt
agatag
DBGET
integrated database retrieval system
