Branchiostoma floridae (Florida lancelet): 118409267
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Entry
118409267 CDS
T01074
Name
(RefSeq) cadherin-related family member 1-like isoform X1
KO
K16501
cadherin-related family member 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfo04515
]
118409267
Cell adhesion molecules [BR:
bfo04515
]
Cadherins
Cadherin related
118409267
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Zona_pellucida
Cadherin_CELSR2_9th
ZP-N
Fn3_assoc
Motif
Other DBs
NCBI-GeneID:
118409267
NCBI-ProteinID:
XP_035666049
UniProt:
A0A9J7KJA7
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Position
2:complement(10597445..10620852)
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AA seq
1102 aa
AA seq
DB search
MAPYFSPYVPGTDSGNMQYLQIREDTPVGTVVYTLHGSDPEGQTVYYGIEGDIGREHFTV
DRLSGTVTLKEAFDRELGAEHDVVVTIEDSTPANKVRQPSKIFITDANDETPVFKNLPYR
VQIPENSPVGTFVVTVTAEDRDLGLAGIVHYSIQESEGSGNFSIDTVRGVVTLATTLDYE
KKTSYQLTVVARDEGGSYRDQKVYRNSTAVVEVEVLDQQDMDPVFYGQPYQVNITEDTPV
GASIAVVSAVDGDRGTSNDIQYSVTCDAGPLFDIDPHTGVIRVNQSLDRDDPDIGDVLTL
DVKAMEIGPGAGLDICTHASVTVRLLDVNDDAPTFYEGEVPRAVFNTSIPENAAGGTLLT
QLNIVIRDRDEGDNAVFGIELLPVVGPEEDIFDVDPKFAANIVHLAVRLKSAVSLDRERT
SNYTYMVFAHETSTMERRNGSALLVVQLEDVNDSPPVFNSSRVDISVPEDVGVGEAITTL
VATDADEEGTPNSEIRYSIITGNDNDLFAIGETTGVLSWNMPVDYESISQSDRGAFTLEV
QAEDQGQPPMSSTVEVVITVEYLGEQRICDCVSTVAWSTPPPVSHKDVNDNAPACPHLYN
FTVTHNVIPGSYVGRVAAVDLDEGDTQRITYELPQNLKNKFAIDRATGGLFVASGSPVTF
EQDPEGLVYDLVVYANDNGVPPQIGICRAKVEVISAQSTPGNGERPVFTEESVHLTCAGD
YVIKVEIAKSGASGNTEGRTLHIGDSTAADCLATENTTHYVLTTRVDECGTAKTIHSGNR
VIYSNTVDFIPLPEEDTSNMTALALALRQYAVVKIVCMYTARGVASTHFSPERDPTIVKV
ADGEMAYHLDLYPDEQFTTPFKVYPIDVSMGESMYFEVGLDSPDVALIVFAENCWASTSP
SGSTANAHWIIQDGCVVDESLQVLPSDQRRFRFTLSAFELLQSNPWVYVYCEVVVCNVTE
LNSRCHQGCLSQETESPPSEDDNFRRKRSDGDSIRSSVELSRTSLLRRRSARDSVVRRLH
EVARQRRASSANLITLTTPGPISGYLACGKNCADERETTAMSQVGTERWVLYGTVLVVAL
MVCITVLISVALIQRRLSNSAR
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggccccgtacttctccccgtacgttcccgggaccgacagcggcaacatgcagtatctc
cagatacgggaggacacacctgtcgggaccgtggtttacaccctgcacgggagtgacccg
gaaggccagacagtttattacggtatcgagggcgatatcggccgagaacacttcactgtc
gatcggctgtcgggaacagtcaccctgaaggaggccttcgaccgagagttgggcgcggaa
cacgacgtcgtagtgactattgaagacagtacacccgccaacaaagtacggcagccgtct
aaaatcttcatcaccgacgcgaacgacgagacccccgtcttcaagaacctgccgtacagg
gtgcagattcccgagaactcccctgttggaacgtttgtggtgacagtgacggcggaagac
agagacttgggactggccgggattgttcactacagcatacaggaatcggaggggtcagga
aatttctccatcgacaccgtgagaggcgtggttaccttggctaccacgctggactatgag
aagaagacatcctatcaactcacagttgtggccagggatgaaggtgggtcctaccgtgac
cagaaggtataccggaacagcacggctgtagtggaggtggaggtgctggaccaacaggac
atggacccggtattctacggacaaccttaccaggtcaacatcacagaggacacgcctgtg
ggtgcatccatcgccgtggtgtcggcagtggacggcgacaggggaacgtcaaacgacata
cagtactccgtcacatgtgacgcaggcccgttatttgacatcgacccgcacacaggggtc
atcagggtcaaccagtctttagacagagacgatccggacatcggggacgtgctgaccttg
gacgtgaaggccatggagatcggtcccggcgcaggtctggacatctgcacgcacgccagc
gtcaccgtcaggttactggacgtcaatgacgacgcgccgacgttctatgagggtgaagtc
ccacgggcggtgttcaacacgtccattccggagaacgccgcggggggcacattgctgaca
cagctcaacatcgtcatcagggatagagatgaaggtgacaacgcggtttttggtatcgaa
cttctaccagtggtgggaccagaggaggacatatttgacgtggacccgaagtttgcggca
aacattgtccacctggcggtccggctgaaaagtgcagtgtcattggacagggagagaacc
agcaattacacttacatggttttcgcacacgagacgagcaccatggaacgccgtaacggt
tcggccctgctggtggtgcagctggaggatgtgaatgactccccgcccgtcttcaactcc
tcacgggtcgacatcagcgtgcctgaggacgtgggagtgggggaggccatcactactctt
gtagctacagatgcggacgaggagggtacaccaaacagtgagatacgctacagcatcatc
accggaaacgacaacgacctctttgccatcggcgagaccacgggcgtcttgagctggaac
atgccggtggactacgagagcatcagccagagtgaccgcggtgccttcacgttagaggtg
caggctgaggaccagggacaaccaccaatgagtagcacggtagaagtggtcatcacggta
gagtatcttggtgagcaaagaatttgcgactgtgtgtcgactgtagcttggagcacgccc
cctcccgtaagccacaaggatgttaacgacaacgccccggcgtgtcctcacctgtacaac
ttcaccgtcacgcacaacgtcatcccaggttcctacgtgggcagagtcgcagctgtagac
ctggacgagggcgacacccagcggatcacgtacgagctgcctcaaaatctgaagaacaaa
ttcgccatagaccgggctacggggggactctttgttgccagtgggtcacctgtgacgttt
gaacaggacccggaaggcttggtgtacgacctagttgtgtacgccaacgacaacggcgtg
cctccacagataggcatatgtcgggccaaggtggaggtcatcagcgcgcagagcacgccg
ggtaacggtgagagaccggtgttcacggaggagtcggtgcacctgacatgcgccggcgat
tacgtcatcaaggtggagatagcgaaatccggagcgtcaggtaacacagaaggacgaact
cttcacatcggagactctaccgcagcagactgcctggctaccgagaacaccacccactac
gtgctgaccacgcgcgtagacgagtgcggcaccgccaaaactatccactcaggaaaccgc
gtcatctactccaacacggtcgacttcatacccctgcctgaggaagatacgtccaacatg
acagcactggcgctggccctgcgtcagtacgcggtggtgaagattgtctgcatgtacacg
gcgcgaggcgtggcgtcaactcacttcagcccggagagggatcccaccatcgtcaaggtg
gctgacggcgagatggcctaccacctggacctgtacccggacgagcagttcaccacgcct
ttcaaggtctaccccattgacgtcagcatgggcgagtccatgtacttcgaggtgggtctg
gactcccctgacgtcgcgctcatcgtgtttgcggagaactgttgggcctccaccagcccc
agcggaagcaccgccaacgcccactggatcatccaggacggttgtgtcgtcgatgaaagc
ctacaagtccttccttcagaccagcgcaggttccgtttcaccctgtcggccttcgaactc
ttacaatccaacccctgggtctacgtctactgcgaagtcgtcgtgtgcaacgtgaccgaa
ctcaactccaggtgtcaccagggctgcctcagtcaggagaccgaatctcctccgagcgaa
gacgacaacttccgaaggaaacggtcggacggcgacagcatccgaagcagcgtcgagttg
tcgcgaacgtcgcttctgagaaggaggagcgccagagacagtgttgtgcggagactacac
gaagtcgcgcggcagagaagagcaagttcagcaaacctcataacgctgaccacaccaggc
ccaatatcagggtacctggcttgtggaaagaactgtgcggatgagagggaaacaacagca
atgtcacaagtcggcacagagcgatgggtcctgtacggaacagtgctggtagtggcgctg
atggtctgtatcaccgtactcatctccgtcgcactcatccaacgcagactcagcaactca
gcacggtga
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