Branchiostoma floridae (Florida lancelet): 118409307
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Entry
118409307 CDS
T01074
Name
(RefSeq) peroxisome assembly factor 2-like
KO
K13339
peroxin-6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118409307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118409307
Membrane trafficking [BR:
bfo04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
118409307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_22
AAA_5
PEX6_4th
AAA_18
DUF815
RuvB_N
AAA_28
AAA_7
RNA_helicase
AAA_33
AAA_14
AAA_lid_3
nSTAND3
TsaE
NTPase_1
AAA_24
AAA_29
NPHP3_N
AAA_25
AAA_30
Sigma54_activat
Mg_chelatase
Cytidylate_kin
TIP49
Vps4_C
Rad17
IstB_IS21
Parvo_NS1
APS_kinase
RsgA_GTPase
AAA_23
PhoH
ATPase
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
118409307
NCBI-ProteinID:
XP_035666176
UniProt:
A0A9J7HUJ9
LinkDB
All DBs
Position
1:complement(14279005..14290651)
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AA seq
1125 aa
AA seq
DB search
MAVPRRHGILRTFSFPSGHHPLHLGITAQDASIIGCNIEDAVSIVSIPRVINDSDTRKEL
FACVSPLPLCSEPAGGGGDDGRADIITLFADEMFFRHYGFRHEEKVNLRLVKAFPLSRLV
IGTRKQQCYNWANGVMFGTGLLVAVCQQKLLARKGDVMLAPVLPMLGDADTVLQQYFDMT
VLECEPALQGVVTVNTSVIVTLMDEESEAGGDTSLQAERDGVSPPIAVVSDFASCLQTLE
YTLSLLPQASLTKDSAEKVLSLLHSSQHVKSSDMRMRVRMLQQQLSAAGETNSGVRCAAE
HQVFATLATLQRLKCFSGSWVKLFIASDNECQSQDGEIPSVNVPDAVDSFITSQEEKVSN
TIPDPDLIEKTTEDLLPSSSPAKKVAPRVCLIQLCAIETGGPQTALEDGTLHVSPQLWFN
LQSLPPIKSPDSCMCTIKPLMALSPDVPSQSQSHSRFCQPPYASQVSIAMVTSPAYTPTC
HFDSALKKYFSTTRVITLGDILCVSTEDDSELFQEMVDGEMMRCPFVYFKVTQVSPTCEE
VPSYLVDLKHTDLYQEGFMNSYIPVSADTFTSDTAASMWTSVHPPGLDLCVDRLCETIVP
YLMHSQPESVKPSVLLTGPQGVGKSTVIRAVRRRLNMHLLQVNCYNLCGESAATVEAGTA
CPVPVSVLGRGWAWHEEDPRVAAMLHEAVAGLRHEASEYPVIVVASSAAAKDVTSDVRGA
FLHHVDIKTPSKRERGLMLKTLCQDVPLSSDVSMDKVAARSAGLVLGDLCSLLSCTTRKA
HRRILDSCCPDGRLSQQDQVDLVAAGVEVKQVDFEKALDHLQAAHSDAIGAPKIPNVSWE
DVGGLAQVRAEILDTIQLPLQHPQLFAAGMRRSGVLLYGPPGTGKTLLAKAVATECSLNF
LSVKGPELINMYVGQSEENVREVFSRARSAAPCVIFFDELDSLAPNRGRSGDSGGVMDRV
VSQLLAELDGLHSAADVFVIGATNRPDLLDPALLRPGRFDKLLFLGVSEDRPSQLKILQA
LTRKFQLAASTQLENVVDQCPYNMTGADFYALCSDGMLNAIRRKIEQLEAGLPVDQTDVT
VEEQDFITALQTLEPSVSISELDRYKQLQGLFTTSLPNSSAPSLE
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacccagacgacatggaattttgcggacgttttcttttccctctggtcaccat
cccctgcacctaggaatcacagctcaggatgcaagtattataggatgcaatatagaagac
gccgtgtctatagtttcaattccaagggtgataaatgattctgacacgaggaaagaactg
ttcgcctgcgtttcgcccctccccctctgctcggaaccagccggagggggcggggacgat
ggtagggctgatatcattactttgtttgctgatgagatgttcttccgacattatggcttc
agacacgaagagaaggttaaccttcgcctcgtgaaagcttttcctctaagcagacttgtt
attgggactcggaagcagcagtgttacaactgggcaaatggtgtgatgttcggaaccggt
ctccttgttgcggtctgccaacagaagctgttagccaggaaaggagacgtgatgttggca
cccgtgctgccgatgctaggtgatgccgacactgtcctgcagcagtattttgacatgaca
gtactggaatgtgaacctgcgttgcagggggtagtcactgtcaatacttctgttattgtc
acactgatggatgaggaaagtgaagcaggaggtgacacctcacttcaggcagagagagat
ggagtttcgcccccaatagctgttgtgtctgactttgccagctgtctgcagaccttggag
tacacgctatcactgttgccacaagctagcctcactaaggacagtgcagagaaagtttta
tctttactacacagttcacaacatgtgaagagttcagacatgaggatgagagtaagaatg
ctccagcagcagctgagtgcagctggggagacaaattcaggtgtcaggtgtgcagctgag
catcaggtgtttgccactcttgctacactgcagaggttgaaatgtttcagtggttcctgg
gtcaaacttttcattgcttctgacaatgaatgtcagtctcaggatggggaaatcccatct
gttaatgttccagatgctgttgattcttttatcacgtctcaagaagagaaagtctctaac
acgatccctgaccctgaccttatagaaaagactacagaagacctactaccatcaagtagt
ccagcaaagaaggttgctccaagagtttgcctgattcagttgtgtgctattgagacaggc
ggtccacagacagcgttagaagatggtacactccatgtctccccccagctgtggtttaat
cttcagagcctgcctcccatcaaatcacctgacagttgtatgtgtacaataaagcccctg
atggcgctcagtcctgatgtccccagccagtcccagagccacagcaggttctgtcagcct
ccatatgccagccaggtgtccatcgccatggtgacctcacctgcctacacacccacctgt
cactttgactcagcactgaaaaaatacttctctactaccagagtcatcacacttggagac
atattatgtgtttcaactgaagatgattcagaattgttccaggagatggtggatggtgag
atgatgaggtgtccatttgtatactttaaggtgacccaggtatcacccacctgtgaggaa
gtgccatcctatctggtggatttgaagcatactgacttgtaccaggaagggtttatgaac
agctacatccctgtatcagctgataccttcacatctgacacagcagcctccatgtggacc
agtgttcatcccccaggcctggacctatgtgtggatagactgtgtgaaaccattgtccca
taccttatgcacagccaacctgagtcagtgaaaccctctgtcctgctgactggacctcag
ggtgtgggcaagtctacagtcatcagggctgtcaggaggagactcaacatgcacctgcta
caggtgaactgttataacctgtgtggggagagtgctgccaccgtcgaggctgggacagca
tgtcccgtacccgtgtctgttctggggcggggctgggcttggcatgaggaggaccccagg
gtggctgccatgctgcatgaagcagtagcaggactcagacatgaagccagtgagtaccca
gtgatagtggtggccagcagtgcagctgctaaggatgtgacaagtgatgtgaggggagca
ttccttcatcatgtggatattaagacacccagtaaaagagagcgtggtctgatgttgaag
acactctgtcaggatgtgccactcagctcagatgtctccatggacaaggttgctgccaga
tcagcaggtttggttcttggggatctgtgcagtctcctgtcctgtacaacaagaaaggct
catcgaagaattctagattcatgctgtccagatggcaggttgagccagcaggaccaggtg
gaccttgtagcagctggggtggaggtgaaacaggtggactttgagaaggccctggaccac
ctgcaggcagctcactcagatgccattggggcaccaaagatccccaacgtgagctgggag
gatgttggtgggctggcccaggtgcgggcagagatcctggacaccatccagctgcctctg
cagcacccgcagctgtttgcagctggcatgaggagatcaggtgtcctgctgtatggacct
ccaggcacagggaagaccctgctggctaaagctgtggctacagagtgttcactcaacttc
ctcagtgtgaagggtccagagctgatcaacatgtacgtagggcagagtgaggagaatgtg
agagaagtgttctcccgtgccagaagtgcggccccatgtgtgatcttctttgatgagctg
gactccctcgctcctaacaggggcaggagtggggactcaggaggggtcatggacagggtt
gtttctcagctgctggcagagctggacggtctgcactccgctgctgatgtgtttgtgatc
ggagccaccaacaggccagacctactggatcctgcactgctcaggccgggaaggtttgac
aagctgttgttcctgggtgtgagtgaagaccgaccatcacagctgaagattctacaggct
ctcacaaggaagttccaacttgctgctagcacacagctggagaatgttgtagaccagtgt
ccctacaacatgacaggggcagacttctacgctctctgctctgatggaatgctcaatgcc
atcaggaggaagatagagcagctggaagcaggcctgccagttgaccagactgatgtgaca
gtagaggagcaggatttcatcacagcactccagacgctggaaccttccgtgtccatctca
gaactggacaggtacaagcagctacagggtctgttcacaacttctctacccaactcatca
gccccaagtctggagtaa
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