Branchiostoma floridae (Florida lancelet): 118409331
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Entry
118409331 CDS
T01074
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118409331
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
118409331
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
118409331
NCBI-ProteinID:
XP_035666178
UniProt:
A0A9J7KLX8
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Position
2:2024219..2069530
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AA seq
1382 aa
AA seq
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MAGSGMSGVVMSAQTVPMDTSQPGPVAQLENQVTKILEDALVTDAIEEVFAGFIVHSEEA
EERKMLSALDEFKRFWQGLSQDNQILVLQHYVKFIHMQKSSRRGRFLFDMLYIAIENQIL
PARLVCECLLLSDELHYLSADKWNQSFSLLHRVIDRVDYKGCRDLFKIALEKVQIIPTTV
TASSLRQLEMVTKLMMSLLNRDNCLMPAYFAVNEIRKLYSEDKSLPHWSLGNLLSEFVDT
FRTTAHMVSISGRPQLLPVVGHSGATGNAWKLDPATLRFPLKGLLPYDKELFEPQTGLLR
YVLEQPYSRDMVCNMLGLNKQHKQRCEVLEEQLVDLIVIAMERSEHADTAVDDGGASQLL
WQHLSSQLIFFVLFQFASFPHMVLSLHEKLVGRSLRKGRDHLMWVLLQFISGSIQKNPLS
DFLPVMKLYDLLYPEKESIQVPDINKPQSTHAFAMTCIWIHLNKKAQNEDSKLQRPIPQA
LKSQLEFLQQSLRGGAKNLPMSDYRIAVLCNAYSTNTEFFALPMGVLVETIYGSGKTTTP
LPGPGSVVASGPTAPLPMNLLDSLTVHAKMSLIHSIVTRVIKLAQTKSNLALAPALVETY
SRLLVYMEIESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRLHHIQPHYRVQLLSHL
HSLAAVPQTNQNQLHLCVESTALRLITGLGSAEVQPQLSRFLNDPKQILSVESEELNRAL
VLTLARAMHVTGSETLSGNWCKDILTTLMSNTPHNWATHTLSCFPPALQQFFKQNPVQVE
NRLNLKKNVEDEFRKWKSMTNENETVQHFTIQGAPPLFLCLLWKMLLESDRISPVAVRIM
ERIGARSLTSHIRTFADFLVYEFSTSVGGQHVNRCIEILNDMIWKYNIVTLDRLILALAF
PSFQAMRSHEGNEAQVCFFIIQLLLLKPSEFRNRVNDFVKENSPEHWLQTDWHSRHMNFH
RRHPEKFYFEGLQELASGSQTSAQPYLPIYFGNVCLRFLPVFDIVIHRFLELPPVSKSLE
TLLDHLGGLYKFHDRPVTYLYNTLHYYEKRLRDRPALKRKLVAAVIGALKDIRQPGWCLS
ESYLKFITRPVEEISWVPDDTYYCKLIGRLVDTISGKNPPPFPNCDWRFNEFPNPAAHAL
HVTCVELMALPVVGNSVGSSLLNVVLKSQPLVPRENIMSWMNAIGLVLTSLPEPYWMVLH
ERIITTVKSDILVLPENLGTDPFTAFDFCGSQGSYNEVQCSYVLALTHAVWHHSSIGQLT
VLPQFLKDQLKPLIQTEEQFLFICHLVGPFLQRFHQERTRCLLEITVELYEMLHNVDKHC
EKLHCIHTIADFLYHVKYMFTGDGVKNEVERIIRTFRPELQKGLRYITHISKPNEASTSS
AS
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatctggtatgtctggagtggtaatgtctgcacaaactgtgcccatggacacg
tctcagcctggtcctgtggcccagctagagaaccaagtcaccaagattctggaggatgcc
ttggtcacagatgccattgaagaagtctttgcagggttcattgtccactctgaagaggcg
gaagagaggaagatgctgagtgctttggacgagttcaagcgattctggcagggcctgtcc
caggacaaccagatcctggtcctccagcactacgtcaagttcatacacatgcagaaaagt
tccagaagggggcgcttcttgttcgacatgctgtacattgcgatagagaaccagattcta
ccagccagactggtgtgtgagtgccttctactgagtgatgaacttcactatctatctgcg
gacaagtggaaccagtccttctcacttctacacagagtcatagacagggtagactacaag
ggatgtagagacctgttcaagattgccctggagaaggtacagattattccaaccacagtc
acggcgtcatcactacggcaactggagatggtcaccaagctgatgatgtcactgctaaac
agagacaactgcctcatgcctgcttattttgctgtcaacgagatcaggaagctgtactca
gaggacaagtccctgccacattggtccttaggcaacttgctgtcagagtttgtggacacc
tttagaacgactgctcatatggtgtccatttcaggccgtccccagctgctcccggtggta
ggacattcaggagccacaggaaatgcctggaaactggaccctgccacactcaggttccct
ctcaagggactcctaccatatgataaggagctttttgaacctcagacaggcctgctgagg
tatgtgttagaacagccatactccagagacatggtgtgcaacatgctgggcctcaacaaa
cagcacaagcagagatgcgaggtgttggaggaacagcttgtggacctgattgtcatcgct
atggagagatctgaacatgcagacacagcagtagacgatggaggggccagtcagttgcta
tggcaacatctgtccagtcagctcatcttcttcgtgctcttccagtttgcaagctttccc
cacatggtgctgtcccttcatgaaaagttggtaggacggagtctgcggaagggcagagac
catctcatgtgggtcttactccagtttatatcagggagtatacagaagaacccgctgagt
gacttcctcccagtgatgaagctgtacgacttgctgtaccctgagaaggaaagcattcag
gttcctgacatcaataaaccccagtccacacatgccttcgccatgacctgcatctggatt
catctgaacaagaaggcacagaacgaggactccaaactacagaggccgatcccacaggct
ctcaagtctcaactggagtttctacaacagagtttgagaggaggggccaagaatctcccc
atgtcagactacagaatagcagtcctgtgcaatgcttatagcaccaatactgagtttttt
gcgctccccatgggggttttggtggagactatatacggctccgggaagacaaccaccccc
ctgccaggccccgggagtgttgtcgcctcaggaccaacggcaccattacccatgaacctc
ctggattcactgacagtccatgccaagatgagcttgatccacagtattgtgacccgtgtg
atcaaactggcccagaccaagtccaacctggccctggccccagccctggtggagacctac
agccgactgctggtctacatggagatagagtcactgggcatcaaaggcttcatcagtcag
ttgttacccaacgtgttcaagagccatgcgtggggtatcctgcacaccctactggagatg
ttcagctacagactgcaccacatccagccacactacagggtacagctgctgtcccacctg
cactccctggctgctgtcccacagaccaaccagaaccagctacatctctgtgtggagagc
actgccctgaggctcatcactggtctggggagtgcagaagtccagccacagctgtccagg
ttcctcaacgaccccaaacagatcctctctgttgaatctgaggagctaaatcgagcactg
gtgttaaccctagcaagagccatgcatgttacaggttcggagactctgtcgggtaactgg
tgtaaggacatcctcaccaccctgatgtccaacaccccccacaactgggccacccacacc
ctgtcctgcttcccgcccgctctacagcagttcttcaaacagaatccagtccaggtggag
aacaggctgaacctgaagaagaatgttgaagacgagttccgcaagtggaagtcgatgaca
aacgagaatgagacggtccaacacttcaccatccagggtgccccgcccctgttcctgtgc
ctcctgtggaagatgctgctggagtctgacaggatcagtcctgtggctgtcagaatcatg
gagaggattggagcccgctccctgacatcacacatcagaaccttcgcagatttcctcgtg
tacgagttctccacatctgtgggtggccagcacgtcaacaggtgcattgagatcctgaat
gacatgatctggaaatacaacatcgttaccttggacaggctcatcctagccctggcattc
ccttcatttcaggccatgcgaagtcacgagggcaacgaggcccaagtctgtttcttcatc
atccagctgctgctgctcaagccctccgagttccgcaacagggtcaacgactttgtcaag
gagaattccccggagcactggctgcagacggactggcacagcagacatatgaactttcac
aggagacatccagagaagttttatttcgaaggcctgcaggagctggcctcggggtcccag
acatcagcacagccatacttacccatctattttggaaatgtctgcttaagattccttcca
gtgtttgatatcgtgatccaccgtttcctggagctgccgcccgtgtccaagtccctggag
accctgctggaccacctggggggtctgtacaagttccacgacaggcccgtcacctacctg
tacaacactctgcactactacgagaagcgtctgcgggacagacctgcgctcaagaggaaa
ctagtggctgctgttattggggccctaaaggacatcagacagcccggctggtgcctgagt
gaaagttacctgaagtttataactcgtcctgtggaggagatttcctgggtgcctgatgac
acctactattgcaagctgattggccgtctagtggataccatttctggaaagaaccctccc
ccatttcccaactgtgactggcggtttaacgagttcccgaaccccgcggcgcacgccctg
cacgtgacgtgtgtggagctcatggccctgcctgtggtggggaacagtgtcggcagctca
cttctcaatgtcgtgctcaagagtcaacccctggttcccagagaaaacatcatgtcatgg
atgaatgccatcggcctggtcctcacctcacttcctgagccatattggatggttctccat
gagcgcatcatcactactgtcaagtcagacatcctggtgttacctgagaacctgggcaca
gaccccttcactgccttcgacttctgtggcagccaagggtcgtacaacgaggtccagtgc
agctacgtgctggccctgacacacgcagtgtggcaccactccagtataggacagctcacg
gtgctgccacagttcctgaaggatcagctgaagccgttgatacagacagaagaacagttc
ctcttcatctgtcacctggtggggcccttcctgcagaggttccaccaggagcgcaccagg
tgtctgctggagatcacagtggagttgtatgagatgctgcacaatgtagataaacactgt
gagaagttacactgcatccacaccatagcagacttcctctatcatgtgaagtacatgttt
acaggagatggggtgaagaacgaagtggagagaatcattcgcaccttccgacctgagctc
cagaagggtctgcgctacatcactcacatcagtaaacctaacgaggcctccacttcatct
gcctcctga
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